EnhancerDB
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  3. vista24826[chr17:40748943-40749226]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24826[chr17:40748943-40749226]
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Tissue distribution of vista24826
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Transcription factor that possibly regulate vista24826[chr17:40748943-40749226]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 40748943 40748959 E2F2 JASPAR yes 21240691
chr17 40748945 40748957 E2F1 JASPAR yes 21240692
chr17 40748948 40748960 YY1 JASPAR yes 21240693
chr17 40748951 40748957 YY1 JASPAR yes 21240694
chr17 40748957 40748971 TLX1 JASPAR yes 21240695
chr17 40748957 40748975 ESR2 JASPAR yes 21240696
chr17 40748958 40748975 ESR1 JASPAR yes 21240697
chr17 40749000 40749004 NFE TRANSFAC yes 21240698
chr17 40749008 40749027 RFX2 JASPAR yes 21240699
chr17 40749018 40749021 MYB TRANSFAC yes 21240700
chr17 40749028 40749037 SNAI2 JASPAR yes 21240701
chr17 40749028 40749038 ID4 JASPAR yes 21240702
chr17 40749028 40749038 TCF3 JASPAR yes 21240703
chr17 40749028 40749038 TCF4 JASPAR yes 21240704
chr17 40749041 40749051 SP1 JASPAR yes 21240705
chr17 40749044 40749053 HIC2 JASPAR yes 21240706
chr17 40749050 40749065 HNF1A JASPAR yes 21240707
chr17 40749051 40749064 HNF1B JASPAR yes 21240708
chr17 40749064 40749079 MEF2A JASPAR yes 21240709
chr17 40749065 40749077 MEF2A JASPAR yes 21240710
chr17 40749066 40749076 MEF2A JASPAR yes 21240711
chr17 40749082 40749093 CEBPB JASPAR yes 21240712
chr17 40749082 40749093 CEBPB JASPAR yes 54311303
chr17 40749085 40749097 YY1 JASPAR yes 21240713
chr17 40749085 40749097 YY1 JASPAR yes 54311304
chr17 40749132 40749137 SP1 TRANSFAC yes 21240714
chr17 40749132 40749137 SP1 TRANSFAC yes 54311305
chr17 40749158 40749168 GSC2 JASPAR yes 21240715
chr17 40749158 40749168 GSC JASPAR yes 21240716
chr17 40749158 40749168 GSC2 JASPAR yes 54311306
chr17 40749158 40749168 GSC JASPAR yes 54311307
chr17 40749159 40749167 OTX1 JASPAR yes 21240717
chr17 40749159 40749167 OTX1 JASPAR yes 54311308
chr17 40749159 40749168 PITX3 JASPAR yes 21240718
chr17 40749159 40749168 PITX3 JASPAR yes 54311309
chr17 40749197 40749218 IRF1 JASPAR yes 21240719
chr17 40749197 40749218 IRF1 JASPAR yes 54311310
chr17 40749199 40749220 IRF1 JASPAR yes 21240720
chr17 40749199 40749220 IRF1 JASPAR yes 54311311
chr17 40749200 40749204 YY1 TRANSFAC yes 21240721
chr17 40749200 40749204 YY1 TRANSFAC yes 54311312
chr17 40749203 40749224 IRF1 JASPAR yes 21240722
chr17 40749203 40749224 IRF1 JASPAR yes 54311313
chr17 40749204 40749219 FOXP1 JASPAR yes 21240723
chr17 40749204 40749219 FOXP1 JASPAR yes 54311314
chr17 40749204 40749225 IRF1 JASPAR yes 21240724
chr17 40749204 40749225 IRF1 JASPAR yes 54311315
chr17 40749206 40749221 FOXP1 JASPAR yes 21240725
chr17 40749206 40749221 FOXP1 JASPAR yes 54311316
chr17 40749208 40749223 FOXP1 JASPAR yes 21240726
chr17 40749208 40749223 FOXP1 JASPAR yes 54311317
chr17 40749209 40749224 FOXP1 JASPAR yes 21240727
chr17 40749209 40749224 FOXP1 JASPAR yes 54311318
chr17 40749210 40749225 FOXP1 JASPAR yes 21240728
chr17 40749210 40749225 FOXP1 JASPAR yes 54311319
chr17 40749211 40749226 FOXP1 JASPAR yes 21240729
chr17 40749211 40749226 FOXP1 JASPAR yes 54311320
chr17 40749212 40749227 FOXP1 JASPAR yes 21240730
chr17 40749212 40749227 FOXP1 JASPAR yes 54311321
chr17 40749226 40749238 PROX1 JASPAR yes 21240731
chr17 40749226 40749238 PROX1 JASPAR yes 54311322
SNP sites on vista24826[chr17:40748943-40749226]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 40749044 rs77790069 C T
HIC2 SP1
4879560
chr17 40749139 rs550699168 G A no 4879561
chr17 40749145 rs4028640 A G no 4879562
chr17 40749169 rs144449302 G A no 4879563
chr17 40749209 rs35711566 C CT
FOXP1 IRF1
4879564
chr17 40749209 rs548078910 C CT
FOXP1 IRF1
4879565
Genes possibly regulated by vista24826[chr17:40748943-40749226]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40688190 40696467 + NAGLU ENSG00000108784.5 40688190 0.64 0.99 15863 39247
chr17 40701232 40707231 + HSD17B1 ENSG00000108786.6 40701232 0.99 1.0 15864 52289
chr17 40713485 40718295 + COASY ENSG00000068120.10 40713485 0.65 1.0 15865 64542
chr17 40719086 40725257 + MLX ENSG00000108788.7 40719086 0.58 1.0 15866 70143
chr17 40724333 40729849 - PSMC3IP ENSG00000131470.10 40729849 0.83 1.0 15867 80906
chr17 40731531 40762641 - FAM134C ENSG00000141699.6 40762641 0.54 1.0 15868 86585
chr17 40761694 40767252 + TUBG1 ENSG00000131462.3 40761694 0.85 1.0 15869 87532
chr17 40811323 40819024 + TUBG2 ENSG00000037042.8 40811323 0.66 1.0 15870 37903
chr17 40819932 40829048 - PLEKHH3 ENSG00000068137.10 40829048 0.79 1.0 15871 20178
chr17 40830907 40835935 - CCR10 ENSG00000184451.5 40835935 0.96 1.0 15872 13291
chr17 40834631 40851832 + CNTNAP1 ENSG00000108797.7 40834631 0.86 1.0 15873 14595
Expression level of Genes
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miRNAs possibly regulated by vista24826[chr17:40748943-40749226]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results