EnhancerDB
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  3. vista24830[chr17:41017672-41017950]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24830[chr17:41017672-41017950]
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Tissue distribution of vista24830
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Transcription factor that possibly regulate vista24830[chr17:41017672-41017950]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41017733 41018014 RXRA UCSC Txn Factor no Conserved 108261047
chr17 41017674 41017685 FOXH1 JASPAR yes 21240883
chr17 41017674 41017685 FOXH1 JASPAR yes 54316634
chr17 41017691 41017695 H4TF2 TRANSFAC yes 21240884
chr17 41017691 41017695 H4TF2 TRANSFAC yes 54316635
chr17 41017697 41017716 REST JASPAR yes 21240885
chr17 41017697 41017716 REST JASPAR yes 54316636
chr17 41017722 41017729 SPIB JASPAR yes 21240886
chr17 41017722 41017729 SPIB JASPAR yes 54316637
chr17 41017727 41017739 PBX1 JASPAR yes 21240887
chr17 41017727 41017739 PBX1 JASPAR yes 54316638
chr17 41017733 41017738 GATA2 JASPAR yes 21240888
chr17 41017733 41017738 GATA2 JASPAR yes 54316639
chr17 41017749 41017760 ESRRA JASPAR yes 21240889
chr17 41017749 41017760 ESRRA JASPAR yes 54316640
chr17 41017750 41017765 NR2C2 JASPAR yes 21240890
chr17 41017750 41017765 NR2C2 JASPAR yes 54316641
chr17 41017753 41017757 LFA1 TRANSFAC yes 21240891
chr17 41017753 41017757 LFA1 TRANSFAC yes 54316642
chr17 41017759 41017774 NR2C2 JASPAR yes 21240892
chr17 41017759 41017774 NR2C2 JASPAR yes 54316643
chr17 41017766 41017787 ZNF263 JASPAR yes 21240893
chr17 41017766 41017787 ZNF263 JASPAR yes 54316644
chr17 41017807 41017817 SP1 JASPAR yes 21240894
chr17 41017807 41017817 SP1 JASPAR yes 54316645
chr17 41017809 41017826 RXRA JASPAR yes 21240895
chr17 41017809 41017826 RXRA JASPAR yes 54316646
chr17 41017810 41017815 SP1 TRANSFAC yes 21240896
chr17 41017810 41017815 SP1 TRANSFAC yes 54316647
chr17 41017811 41017826 NR2C2 JASPAR yes 21240897
chr17 41017811 41017826 NR2C2 JASPAR yes 54316648
chr17 41017814 41017818 LFA1 TRANSFAC yes 21240898
chr17 41017814 41017818 LFA1 TRANSFAC yes 54316649
chr17 41017820 41017835 HNF1A JASPAR yes 21240899
chr17 41017820 41017835 HNF1A JASPAR yes 54316650
chr17 41017821 41017833 HNF1B JASPAR yes 21240900
chr17 41017821 41017833 HNF1B JASPAR yes 54316651
chr17 41017821 41017834 HNF1B JASPAR yes 21240901
chr17 41017821 41017834 HNF1B JASPAR yes 54316652
chr17 41017822 41017837 HNF4A JASPAR yes 21240902
chr17 41017822 41017837 HNF4A JASPAR yes 54316653
chr17 41017823 41017837 NR2F1 JASPAR yes 21240903
chr17 41017823 41017837 RXRB JASPAR yes 21240904
chr17 41017823 41017837 RXRG JASPAR yes 21240905
chr17 41017823 41017837 NR2F1 JASPAR yes 54316654
chr17 41017823 41017837 RXRB JASPAR yes 54316655
chr17 41017823 41017837 RXRG JASPAR yes 54316656
chr17 41017823 41017838 HNF4G JASPAR yes 21240906
chr17 41017823 41017838 HNF4G JASPAR yes 54316657
chr17 41017829 41017846 RARA JASPAR yes 21240907
chr17 41017829 41017846 RARA JASPAR yes 54316658
chr17 41017839 41017853 RORA JASPAR yes 21240908
chr17 41017839 41017853 RORA JASPAR yes 54316659
chr17 41017840 41017850 RORA JASPAR yes 21240909
chr17 41017840 41017850 RORA JASPAR yes 54316660
chr17 41017870 41017880 HOXB13 JASPAR yes 21240910
chr17 41017870 41017880 HOXB13 JASPAR yes 54316661
chr17 41017887 41017898 ESRRA JASPAR yes 21240911
chr17 41017887 41017898 ESRRA JASPAR yes 54316662
chr17 41017891 41017895 ESR1 TRANSFAC yes 21240912
chr17 41017891 41017895 ESR1 TRANSFAC yes 54316663
chr17 41017893 41017904 ESRRA JASPAR yes 21240913
chr17 41017893 41017904 ESRRB JASPAR yes 21240914
chr17 41017893 41017904 ESRRA JASPAR yes 54316664
chr17 41017893 41017904 ESRRB JASPAR yes 54316665
chr17 41017897 41017901 ESR1 TRANSFAC yes 21240915
chr17 41017897 41017901 ESR1 TRANSFAC yes 54316666
chr17 41017904 41017923 REST JASPAR yes 21240916
chr17 41017904 41017923 REST JASPAR yes 54316667
chr17 41017919 41017929 ID4 JASPAR yes 21240917
chr17 41017919 41017929 TCF4 JASPAR yes 21240918
chr17 41017919 41017929 ID4 JASPAR yes 54316668
chr17 41017919 41017929 TCF4 JASPAR yes 54316669
chr17 41017924 41017937 SMAD2 JASPAR yes 21240919
chr17 41017924 41017937 SMAD2 JASPAR yes 54316670
chr17 41017928 41017932 NFE TRANSFAC yes 21240920
chr17 41017928 41017932 NFE TRANSFAC yes 54316671
chr17 41017936 41017940 NFE TRANSFAC yes 21240921
chr17 41017936 41017940 NFE TRANSFAC yes 54316672
SNP sites on vista24830[chr17:41017672-41017950]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41017759 rs189858146 G C
ESRRA NR2C2 RXRA
4880483
chr17 41017771 rs575050855 G A
NR2C2 RXRA ZNF263
4880484
Genes possibly regulated by vista24830[chr17:41017672-41017950]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 40925454 40931617 + VPS25 ENSG00000131475.2 40925454 0.67 0.99 15876 7782
chr17 40932696 40948954 + WNK4 ENSG00000126562.12 40932696 0.96 1.0 15877 15024
chr17 40947165 40950722 - COA3 ENSG00000183978.7 40950722 0.75 0.99 15878 33050
chr17 40950810 40963605 + CNTD1 ENSG00000176563.5 40950810 0.67 1.0 15879 33138
chr17 40962152 40985367 - BECN1 ENSG00000126581.8 40985367 0.59 1.0 15880 67695
chr17 40976402 40995774 + PSME3 ENSG00000131467.6 40976402 0.84 0.99 15881 58730
chr17 40996617 41002724 + AOC2 ENSG00000131480.4 40996617 0.77 1.0 15882 78945
chr17 41003201 41010147 + AOC3 ENSG00000131471.2 41003201 0.9 1.0 15883 85529
chr17 41052814 41065386 + G6PC ENSG00000131482.5 41052814 1.0 0.96 15884 65136
chr17 41102543 41116515 - AARSD1 ENSG00000266967.2 41116515 0.57 0.95 15886 1435
Expression level of Genes
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miRNAs possibly regulated by vista24830[chr17:41017672-41017950]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results