EnhancerDB
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  3. vista24835[chr17:41198878-41199234]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24835[chr17:41198878-41199234]
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Tissue distribution of vista24835
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Transcription factor that possibly regulate vista24835[chr17:41198878-41199234]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41198882 41198885 MYB TRANSFAC yes 21241111
chr17 41198904 41198909 ETS2 TRANSFAC yes 21241112
chr17 41198906 41198916 RELA JASPAR yes 21241113
chr17 41198906 41198916 REL JASPAR yes 21241114
chr17 41198917 41198928 FOXP2 JASPAR yes 21241115
chr17 41198918 41198926 FOXO3 JASPAR yes 21241116
chr17 41198934 41198944 HOXC10 JASPAR yes 21241117
chr17 41198934 41198944 HOXD11 JASPAR yes 21241118
chr17 41198934 41198945 HOXC11 JASPAR yes 21241119
chr17 41198934 41198945 HOXC12 JASPAR yes 21241120
chr17 41198934 41198945 HOXD12 JASPAR yes 21241121
chr17 41198937 41198940 MYB TRANSFAC yes 21241122
chr17 41198943 41198953 NFATC3 JASPAR yes 21241123
chr17 41198945 41198952 NFATC2 JASPAR yes 21241124
chr17 41198968 41198973 ETS2 TRANSFAC yes 21241125
chr17 41198969 41198990 IRF1 JASPAR yes 21241126
chr17 41198974 41198986 IRF1 JASPAR yes 21241127
chr17 41198987 41198997 MEOX2 JASPAR yes 21241128
chr17 41199001 41199005 YY1 TRANSFAC yes 21241129
chr17 41199006 41199010 TEAD2 TRANSFAC yes 21241130
chr17 41199006 41199011 TBP TRANSFAC yes 21241131
chr17 41199006 41199012 TFIID TRANSFAC yes 21241132
chr17 41199013 41199023 CLOCK JASPAR yes 21241133
chr17 41199015 41199020 MYC TRANSFAC yes 21241134
chr17 41199015 41199020 USF1 TRANSFAC yes 21241135
chr17 41199015 41199020 USF2 TRANSFAC yes 21241136
chr17 41199021 41199029 FOXL1 JASPAR yes 21241137
chr17 41199031 41199041 BHLHE22 JASPAR yes 21241138
chr17 41199048 41199058 HOXA13 JASPAR yes 21241139
chr17 41199048 41199058 HOXB13 JASPAR yes 21241140
chr17 41199049 41199058 CDX1 JASPAR yes 21241141
chr17 41199065 41199075 NKX2-3 JASPAR yes 21241142
chr17 41199077 41199085 HOXA5 JASPAR yes 21241143
chr17 41199084 41199092 RHOXF1 JASPAR yes 21241144
chr17 41199084 41199093 PITX3 JASPAR yes 21241145
chr17 41199089 41199093 YY1 TRANSFAC yes 21241146
chr17 41199090 41199100 HOXA13 JASPAR yes 21241147
chr17 41199090 41199100 HOXB13 JASPAR yes 21241148
chr17 41199090 41199100 HOXD13 JASPAR yes 21241149
chr17 41199090 41199101 HOXA10 JASPAR yes 21241150
chr17 41199091 41199100 CDX1 JASPAR yes 21241151
chr17 41199091 41199102 CDX2 JASPAR yes 21241152
chr17 41199092 41199106 ONECUT2 JASPAR yes 21241153
chr17 41199092 41199106 ONECUT3 JASPAR yes 21241154
chr17 41199095 41199104 SRY JASPAR yes 21241155
chr17 41199101 41199114 POU3F3 JASPAR yes 21241156
chr17 41199102 41199114 POU3F2 JASPAR yes 21241157
chr17 41199111 41199129 IRF2 JASPAR yes 21241158
chr17 41199112 41199133 IRF1 JASPAR yes 21241159
chr17 41199114 41199129 PRDM1 JASPAR yes 21241160
chr17 41199114 41199129 STAT2 JASPAR yes 21241161
chr17 41199115 41199129 SPIC JASPAR yes 21241162
chr17 41199115 41199129 STAT1 JASPAR yes 21241163
chr17 41199116 41199131 IRF9 JASPAR yes 21241164
chr17 41199117 41199132 FOXP1 JASPAR yes 21241165
chr17 41199119 41199134 FOXP1 JASPAR yes 21241166
chr17 41199142 41199161 PAX5 JASPAR yes 21241167
chr17 41199150 41199154 NFE TRANSFAC yes 21241168
chr17 41199172 41199182 SREBF1 JASPAR yes 21241169
chr17 41199172 41199182 SREBF2 JASPAR yes 21241170
chr17 41199173 41199181 MGA JASPAR yes 21241171
chr17 41199189 41199203 PAX6 JASPAR yes 21241172
chr17 41199208 41199215 JUN TRANSFAC yes 21241173
chr17 41199215 41199233 RARA JASPAR yes 21241174
chr17 41199221 41199232 E2F6 JASPAR yes 21241175
chr17 41199224 41199232 TBX15 JASPAR yes 21241176
SNP sites on vista24835[chr17:41198878-41199234]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41198948 rs139237482 G C
NFATC2 NFATC3
4881311
chr17 41199002 rs8176313 C T
YY1
4881312
chr17 41199030 rs145225180 C T no 4881313
chr17 41199123 rs8176312 T C
FOXP1 IRF1 IRF2 IRF9 PRDM1 SPIC STAT1 STAT2
4881314
chr17 41199136 rs550394029 AG A no 4881315
chr17 41199178 rs8068463 G A
MGA SREBF1 SREBF2
4881316
Genes possibly regulated by vista24835[chr17:41198878-41199234]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41102543 41116515 - AARSD1 ENSG00000266967.2 41116515 0.57 0.95 15886 17637
chr17 41102543 41132545 - PTGES3L-AARSD1 ENSG00000108825.13 41132545 0.83 0.88 15885 33667
chr17 41120105 41132545 - PTGES3L ENSG00000267060.1 41132545 0.92 0.98 15887 33667
chr17 41132582 41145707 + RUNDC1 ENSG00000198863.3 41132582 0.58 1.0 15888 33704
chr17 41150290 41154976 + RPL27 ENSG00000131469.8 41150290 0.8 1.0 15889 51412
chr17 41158742 41166473 + IFI35 ENSG00000068079.3 41158742 0.61 1.0 15890 59864
chr17 41166622 41177140 - VAT1 ENSG00000108828.11 41177140 0.71 1.0 15891 78262
chr17 41177258 41184057 + RND2 ENSG00000108830.7 41177258 0.89 0.98 15892 78380
chr17 41196312 41277500 - BRCA1 ENSG00000012048.15 41277500 0.9 0.98 15893 21734
Expression level of Genes
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miRNAs possibly regulated by vista24835[chr17:41198878-41199234]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results