EnhancerDB
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  3. vista24836[chr17:41233585-41233852]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24836[chr17:41233585-41233852]
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Tissue distribution of vista24836
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Transcription factor that possibly regulate vista24836[chr17:41233585-41233852]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41233579 41233587 FOXC1 JASPAR yes 21241177
chr17 41233579 41233587 FOXC1 JASPAR yes 54326174
chr17 41233598 41233609 STAT3 JASPAR yes 21241178
chr17 41233598 41233609 STAT3 JASPAR yes 54326175
chr17 41233617 41233622 TFAP2A TRANSFAC yes 21241179
chr17 41233617 41233622 TFAP2A TRANSFAC yes 54326176
chr17 41233617 41233623 MZF1 JASPAR yes 21241180
chr17 41233617 41233623 MZF1 JASPAR yes 54326177
chr17 41233621 41233635 GLIS2 JASPAR yes 21241181
chr17 41233621 41233635 GLIS3 JASPAR yes 21241182
chr17 41233621 41233635 GLIS2 JASPAR yes 54326178
chr17 41233621 41233635 GLIS3 JASPAR yes 54326179
chr17 41233647 41233659 FOXI1 JASPAR yes 21241183
chr17 41233647 41233659 FOXI1 JASPAR yes 54326180
chr17 41233663 41233673 MEF2A JASPAR yes 21241184
chr17 41233663 41233673 MEF2A JASPAR yes 54326181
chr17 41233664 41233668 YY1 TRANSFAC yes 21241185
chr17 41233664 41233668 YY1 TRANSFAC yes 54326182
chr17 41233694 41233704 ALX3 JASPAR yes 21241186
chr17 41233694 41233704 ESX1 JASPAR yes 21241187
chr17 41233694 41233704 GSX1 JASPAR yes 21241188
chr17 41233694 41233704 GSX2 JASPAR yes 21241189
chr17 41233694 41233704 LBX2 JASPAR yes 21241190
chr17 41233694 41233704 MIXL1 JASPAR yes 21241191
chr17 41233694 41233704 MNX1 JASPAR yes 21241192
chr17 41233694 41233704 RAX JASPAR yes 21241193
chr17 41233694 41233704 ALX3 JASPAR yes 54326183
chr17 41233694 41233704 ESX1 JASPAR yes 54326184
chr17 41233694 41233704 GSX1 JASPAR yes 54326185
chr17 41233694 41233704 GSX2 JASPAR yes 54326186
chr17 41233694 41233704 LBX2 JASPAR yes 54326187
chr17 41233694 41233704 MIXL1 JASPAR yes 54326188
chr17 41233694 41233704 MNX1 JASPAR yes 54326189
chr17 41233694 41233704 RAX JASPAR yes 54326190
chr17 41233695 41233699 H1TF2 TRANSFAC yes 21241194
chr17 41233695 41233699 NFE TRANSFAC yes 21241195
chr17 41233695 41233699 SRF TRANSFAC yes 21241196
chr17 41233695 41233699 H1TF2 TRANSFAC yes 54326191
chr17 41233695 41233699 NFE TRANSFAC yes 54326192
chr17 41233695 41233699 SRF TRANSFAC yes 54326193
chr17 41233695 41233703 BARX1 JASPAR yes 21241197
chr17 41233695 41233703 BSX JASPAR yes 21241198
chr17 41233695 41233703 DLX6 JASPAR yes 21241199
chr17 41233695 41233703 ISX JASPAR yes 21241200
chr17 41233695 41233703 LBX1 JASPAR yes 21241201
chr17 41233695 41233703 LHX9 JASPAR yes 21241202
chr17 41233695 41233703 MSX1 JASPAR yes 21241203
chr17 41233695 41233703 MSX2 JASPAR yes 21241204
chr17 41233695 41233703 NKX6-2 JASPAR yes 21241205
chr17 41233695 41233703 PRRX1 JASPAR yes 21241206
chr17 41233695 41233703 RAX2 JASPAR yes 21241207
chr17 41233695 41233703 SHOX JASPAR yes 21241208
chr17 41233695 41233703 UNCX JASPAR yes 21241209
chr17 41233695 41233703 BARX1 JASPAR yes 54326194
chr17 41233695 41233703 BSX JASPAR yes 54326195
chr17 41233695 41233703 DLX6 JASPAR yes 54326196
chr17 41233695 41233703 ISX JASPAR yes 54326197
chr17 41233695 41233703 LBX1 JASPAR yes 54326198
chr17 41233695 41233703 LHX9 JASPAR yes 54326199
chr17 41233695 41233703 MSX1 JASPAR yes 54326200
chr17 41233695 41233703 MSX2 JASPAR yes 54326201
chr17 41233695 41233703 NKX6-2 JASPAR yes 54326202
chr17 41233695 41233703 PRRX1 JASPAR yes 54326203
chr17 41233695 41233703 RAX2 JASPAR yes 54326204
chr17 41233695 41233703 SHOX JASPAR yes 54326205
chr17 41233695 41233703 UNCX JASPAR yes 54326206
chr17 41233695 41233705 HOXA13 JASPAR yes 21241210
chr17 41233695 41233705 HOXB13 JASPAR yes 21241211
chr17 41233695 41233705 HOXD13 JASPAR yes 21241212
chr17 41233695 41233705 HOXA13 JASPAR yes 54326207
chr17 41233695 41233705 HOXB13 JASPAR yes 54326208
chr17 41233695 41233705 HOXD13 JASPAR yes 54326209
chr17 41233695 41233711 POU4F2 JASPAR yes 21241213
chr17 41233695 41233711 POU4F2 JASPAR yes 54326210
chr17 41233710 41233720 NFATC3 JASPAR yes 21241214
chr17 41233710 41233720 NFATC3 JASPAR yes 54326211
chr17 41233711 41233729 IRF2 JASPAR yes 21241215
chr17 41233711 41233729 IRF2 JASPAR yes 54326212
chr17 41233711 41233732 ZNF263 JASPAR yes 21241216
chr17 41233711 41233732 ZNF263 JASPAR yes 54326213
chr17 41233712 41233733 IRF1 JASPAR yes 21241217
chr17 41233712 41233733 IRF1 JASPAR yes 54326214
chr17 41233714 41233729 PRDM1 JASPAR yes 21241218
chr17 41233714 41233729 PRDM1 JASPAR yes 54326215
chr17 41233720 41233735 PRDM1 JASPAR yes 21241219
chr17 41233720 41233735 PRDM1 JASPAR yes 54326216
chr17 41233725 41233730 ETS2 TRANSFAC yes 21241220
chr17 41233725 41233730 ETS2 TRANSFAC yes 54326217
chr17 41233731 41233735 YY1 TRANSFAC yes 21241221
chr17 41233731 41233735 YY1 TRANSFAC yes 54326218
chr17 41233740 41233744 YY1 TRANSFAC yes 21241222
chr17 41233740 41233744 YY1 TRANSFAC yes 54326219
chr17 41233765 41233780 STAT1 JASPAR yes 21241223
chr17 41233765 41233780 STAT1 JASPAR yes 54326220
chr17 41233767 41233778 STAT1 JASPAR yes 21241224
chr17 41233767 41233778 STAT1 JASPAR yes 54326221
chr17 41233772 41233779 SPI1 JASPAR yes 21241225
chr17 41233772 41233779 SPI1 JASPAR yes 54326222
chr17 41233811 41233815 H1TF2 TRANSFAC yes 21241226
chr17 41233811 41233815 NFE TRANSFAC yes 21241227
chr17 41233811 41233815 SRF TRANSFAC yes 21241228
chr17 41233811 41233815 H1TF2 TRANSFAC yes 54326223
chr17 41233811 41233815 NFE TRANSFAC yes 54326224
chr17 41233811 41233815 SRF TRANSFAC yes 54326225
chr17 41233830 41233834 H4TF2 TRANSFAC yes 21241229
chr17 41233830 41233834 H4TF2 TRANSFAC yes 54326226
chr17 41233852 41233855 MYB TRANSFAC yes 21241230
chr17 41233852 41233855 MYB TRANSFAC yes 54326227
SNP sites on vista24836[chr17:41233585-41233852]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41233627 rs8176186 C T
GLIS2 GLIS3
4881357
chr17 41233650 rs572999365 CTGTT C
FOXI1
4881358
chr17 41233770 rs530463308 T C
STAT1
4881359
Genes possibly regulated by vista24836[chr17:41233585-41233852]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41150290 41154976 + RPL27 ENSG00000131469.8 41150290 0.8 1.0 15889 16705
chr17 41158742 41166473 + IFI35 ENSG00000068079.3 41158742 0.61 1.0 15890 25157
chr17 41166622 41177140 - VAT1 ENSG00000108828.11 41177140 0.71 1.0 15891 43555
chr17 41177258 41184057 + RND2 ENSG00000108830.7 41177258 0.89 0.98 15892 43673
chr17 41196312 41277500 - BRCA1 ENSG00000012048.15 41277500 0.9 0.98 15893 56352
chr17 41322498 41363708 + NBR1 ENSG00000188554.9 41322498 0.63 0.99 15894 11354
Expression level of Genes
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miRNAs possibly regulated by vista24836[chr17:41233585-41233852]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results