EnhancerDB
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  3. vista24839[chr17:41409196-41409569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24839[chr17:41409196-41409569]
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Tissue distribution of vista24839
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Transcription factor that possibly regulate vista24839[chr17:41409196-41409569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41409196 41409211 FOXP1 JASPAR yes 21241318
chr17 41409197 41409212 FOXP1 JASPAR yes 21241319
chr17 41409197 41409218 IRF1 JASPAR yes 21241320
chr17 41409198 41409213 FOXP1 JASPAR yes 21241321
chr17 41409198 41409219 IRF1 JASPAR yes 21241322
chr17 41409199 41409214 FOXP1 JASPAR yes 21241323
chr17 41409199 41409220 IRF1 JASPAR yes 21241324
chr17 41409200 41409215 FOXP1 JASPAR yes 21241325
chr17 41409200 41409221 IRF1 JASPAR yes 21241326
chr17 41409201 41409216 FOXP1 JASPAR yes 21241327
chr17 41409201 41409222 IRF1 JASPAR yes 21241328
chr17 41409202 41409217 FOXP1 JASPAR yes 21241329
chr17 41409202 41409223 IRF1 JASPAR yes 21241330
chr17 41409203 41409218 FOXP1 JASPAR yes 21241331
chr17 41409203 41409224 IRF1 JASPAR yes 21241332
chr17 41409204 41409219 FOXP1 JASPAR yes 21241333
chr17 41409204 41409225 IRF1 JASPAR yes 21241334
chr17 41409204 41409225 IRF1 JASPAR yes 54335531
chr17 41409205 41409220 FOXP1 JASPAR yes 21241335
chr17 41409205 41409226 IRF1 JASPAR yes 21241336
chr17 41409205 41409226 IRF1 JASPAR yes 54335532
chr17 41409206 41409221 FOXP1 JASPAR yes 21241337
chr17 41409208 41409223 FOXP1 JASPAR yes 21241338
chr17 41409209 41409230 IRF1 JASPAR yes 21241339
chr17 41409209 41409230 IRF1 JASPAR yes 54335533
chr17 41409210 41409225 FOXP1 JASPAR yes 21241340
chr17 41409210 41409225 FOXP1 JASPAR yes 54335534
chr17 41409210 41409231 IRF1 JASPAR yes 21241341
chr17 41409210 41409231 IRF1 JASPAR yes 54335535
chr17 41409211 41409232 IRF1 JASPAR yes 21241342
chr17 41409211 41409232 IRF1 JASPAR yes 54335536
chr17 41409215 41409230 FOXP1 JASPAR yes 21241343
chr17 41409215 41409230 FOXP1 JASPAR yes 54335537
chr17 41409215 41409236 IRF1 JASPAR yes 21241344
chr17 41409215 41409236 IRF1 JASPAR yes 54335538
chr17 41409216 41409231 FOXP1 JASPAR yes 21241345
chr17 41409216 41409231 FOXP1 JASPAR yes 54335539
chr17 41409217 41409232 IRF9 JASPAR yes 21241346
chr17 41409217 41409232 IRF9 JASPAR yes 54335540
chr17 41409219 41409233 STAT1 JASPAR yes 21241347
chr17 41409219 41409233 STAT1 JASPAR yes 54335541
chr17 41409219 41409234 STAT2 JASPAR yes 21241348
chr17 41409219 41409234 STAT2 JASPAR yes 54335542
chr17 41409221 41409239 NR3C1 JASPAR yes 21241349
chr17 41409221 41409239 NR3C1 JASPAR yes 54335543
chr17 41409272 41409292 PPARG JASPAR yes 21241350
chr17 41409272 41409292 PPARG JASPAR yes 54335544
chr17 41409273 41409291 ESR2 JASPAR yes 21241351
chr17 41409273 41409291 ESR2 JASPAR yes 54335545
chr17 41409273 41409293 PPARG JASPAR yes 21241352
chr17 41409273 41409293 PPARG JASPAR yes 54335546
chr17 41409274 41409291 ESR1 JASPAR yes 21241353
chr17 41409274 41409291 ESR1 JASPAR yes 54335547
chr17 41409275 41409290 ESR2 JASPAR yes 21241354
chr17 41409275 41409290 ESR2 JASPAR yes 54335548
chr17 41409275 41409295 ESR1 JASPAR yes 21241355
chr17 41409275 41409295 ESR1 JASPAR yes 54335549
chr17 41409276 41409280 ESR1 TRANSFAC yes 21241356
chr17 41409276 41409280 ESR1 TRANSFAC yes 54335550
chr17 41409306 41409319 ZBTB18 JASPAR yes 21241357
chr17 41409306 41409319 ZBTB18 JASPAR yes 54335551
chr17 41409313 41409328 AR JASPAR yes 21241358
chr17 41409313 41409328 AR JASPAR yes 54335552
chr17 41409336 41409349 ZBTB18 JASPAR yes 21241359
chr17 41409336 41409349 ZBTB18 JASPAR yes 54335553
chr17 41409340 41409345 MYC TRANSFAC yes 21241360
chr17 41409340 41409345 MYC TRANSFAC yes 54335554
chr17 41409357 41409361 YY1 TRANSFAC yes 21241361
chr17 41409357 41409361 YY1 TRANSFAC yes 54335555
chr17 41409409 41409419 TFAP4 JASPAR yes 21241362
chr17 41409409 41409419 TFAP4 JASPAR yes 54335556
chr17 41409418 41409429 STAT3 JASPAR yes 21241363
chr17 41409418 41409429 STAT3 JASPAR yes 54335557
chr17 41409427 41409446 PAX5 JASPAR yes 21241364
chr17 41409427 41409446 PAX5 JASPAR yes 54335558
chr17 41409466 41409471 SP1 TRANSFAC yes 21241365
chr17 41409466 41409471 SP1 TRANSFAC yes 54335559
chr17 41409479 41409490 HOXC11 JASPAR yes 21241366
chr17 41409479 41409490 HOXC12 JASPAR yes 21241367
chr17 41409479 41409490 HOXC13 JASPAR yes 21241368
chr17 41409479 41409490 HOXC11 JASPAR yes 54335560
chr17 41409479 41409490 HOXC12 JASPAR yes 54335561
chr17 41409479 41409490 HOXC13 JASPAR yes 54335562
chr17 41409480 41409490 HOXD11 JASPAR yes 21241369
chr17 41409480 41409490 HOXD11 JASPAR yes 54335563
chr17 41409486 41409501 STAT1 JASPAR yes 21241370
chr17 41409486 41409501 STAT1 JASPAR yes 54335564
chr17 41409488 41409499 STAT1 JASPAR yes 21241371
chr17 41409488 41409499 STAT1 JASPAR yes 54335565
chr17 41409490 41409501 ETV2 JASPAR yes 21241372
chr17 41409490 41409501 ETV2 JASPAR yes 54335566
chr17 41409491 41409501 ERF JASPAR yes 21241373
chr17 41409491 41409501 ERG JASPAR yes 21241374
chr17 41409491 41409501 ETS1 JASPAR yes 21241375
chr17 41409491 41409501 FLI1 JASPAR yes 21241376
chr17 41409491 41409501 ERF JASPAR yes 54335567
chr17 41409491 41409501 ERG JASPAR yes 54335568
chr17 41409491 41409501 ETS1 JASPAR yes 54335569
chr17 41409491 41409501 FLI1 JASPAR yes 54335570
chr17 41409491 41409502 FLI1 JASPAR yes 21241377
chr17 41409491 41409502 FLI1 JASPAR yes 54335571
chr17 41409492 41409500 FEV JASPAR yes 21241378
chr17 41409492 41409500 FEV JASPAR yes 54335572
chr17 41409515 41409521 MZF1 JASPAR yes 21241379
chr17 41409515 41409521 MZF1 JASPAR yes 54335573
chr17 41409544 41409555 HOXC13 JASPAR yes 21241380
chr17 41409544 41409555 HOXC13 JASPAR yes 54335574
chr17 41409545 41409554 CDX1 JASPAR yes 21241381
chr17 41409545 41409554 CDX1 JASPAR yes 54335575
chr17 41409545 41409555 HOXA13 JASPAR yes 21241382
chr17 41409545 41409555 HOXC10 JASPAR yes 21241383
chr17 41409545 41409555 HOXD13 JASPAR yes 21241384
chr17 41409545 41409555 HOXA13 JASPAR yes 54335576
chr17 41409545 41409555 HOXC10 JASPAR yes 54335577
chr17 41409545 41409555 HOXD13 JASPAR yes 54335578
chr17 41409556 41409568 IRF1 JASPAR yes 21241385
chr17 41409556 41409568 IRF1 JASPAR yes 54335579
chr17 41409556 41409570 IRF7 JASPAR yes 21241386
chr17 41409556 41409570 IRF7 JASPAR yes 54335580
chr17 41409556 41409571 IRF9 JASPAR yes 21241387
chr17 41409556 41409571 IRF9 JASPAR yes 54335581
chr17 41409561 41409565 YY1 TRANSFAC yes 21241388
chr17 41409561 41409565 YY1 TRANSFAC yes 54335582
SNP sites on vista24839[chr17:41409196-41409569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41409270 rs142991594 T G no 4882274
chr17 41409406 rs151116160 C T no 4882275
chr17 41409408 rs114824194 G T no 4882276
chr17 41409416 rs4356517 T C
TFAP4
4882277
chr17 41409510 rs180768708 T G no 4882278
Genes possibly regulated by vista24839[chr17:41409196-41409569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41322498 41363708 + NBR1 ENSG00000188554.9 41322498 0.63 0.99 15894 13302
chr17 41363854 41372061 + TMEM106A ENSG00000184988.4 41363854 0.89 1.0 15895 54658
chr17 41476327 41478505 + ARL4D ENSG00000175906.4 41476327 0.78 1.0 15896 33242
Expression level of Genes
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miRNAs possibly regulated by vista24839[chr17:41409196-41409569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results