EnhancerDB
  1. Home
  2. Enhancers
  3. vista24848[chr17:41656262-41656390]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24848[chr17:41656262-41656390]
Back to top
Tissue distribution of vista24848
Back to top
Transcription factor that possibly regulate vista24848[chr17:41656262-41656390]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41656116 41656526 RELA UCSC Txn Factor no Conserved 108261467
chr17 41656145 41656495 EBF1 UCSC Txn Factor no Conserved 108261470
chr17 41656265 41656280 TFAP2A JASPAR yes 21241670
chr17 41656265 41656280 TFAP2C JASPAR yes 21241671
chr17 41656268 41656280 TFAP2A JASPAR yes 21241672
chr17 41656268 41656280 TFAP2B JASPAR yes 21241673
chr17 41656268 41656280 TFAP2C JASPAR yes 21241674
chr17 41656272 41656281 THAP1 JASPAR yes 21241675
chr17 41656275 41656279 LFA1 TRANSFAC yes 21241676
chr17 41656278 41656286 EHF JASPAR yes 21241677
chr17 41656282 41656295 ZBTB18 JASPAR yes 21241678
chr17 41656313 41656324 NFKB1 JASPAR yes 21241679
chr17 41656313 41656326 NFKB1 JASPAR yes 21241680
chr17 41656313 41656326 NFKB2 JASPAR yes 21241681
chr17 41656314 41656324 NFKB1 JASPAR yes 21241682
chr17 41656314 41656324 RELA JASPAR yes 21241683
chr17 41656314 41656325 NFKB1 JASPAR yes 21241684
chr17 41656315 41656325 NFKB1 JASPAR yes 21241685
chr17 41656315 41656325 RELA JASPAR yes 21241686
chr17 41656315 41656325 REL JASPAR yes 21241687
chr17 41656334 41656338 H4TF2 TRANSFAC yes 21241688
chr17 41656334 41656348 EBF1 JASPAR yes 21241689
chr17 41656335 41656346 EBF1 JASPAR yes 21241690
chr17 41656336 41656347 EBF1 JASPAR yes 21241691
chr17 41656337 41656346 TFAP2A JASPAR yes 21241692
chr17 41656348 41656352 LFA1 TRANSFAC yes 21241693
chr17 41656357 41656378 ZNF263 JASPAR yes 21241694
chr17 41656358 41656372 CREB3 JASPAR yes 21241695
chr17 41656358 41656378 ESR1 JASPAR yes 21241696
chr17 41656365 41656371 YY1 JASPAR yes 21241697
chr17 41656369 41656388 CTCF JASPAR yes 21241698
SNP sites on vista24848[chr17:41656262-41656390]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41656275 rs576953410 TG T
EBF1 LFA1 RELA TFAP2A TFAP2B TFAP2C THAP1
4884390
chr17 41656330 rs7216851 C T
EBF1 RELA
4884391
chr17 41656369 rs114769401 A C,G
CREB3 CTCF EBF1 ESR1 RELA YY1 ZNF263
4884392
Genes possibly regulated by vista24848[chr17:41656262-41656390]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41561233 41621831 + DHX8 ENSG00000067596.6 41561233 0.61 0.99 15897 4971
chr17 41605212 41656988 - ETV4 ENSG00000175832.8 41656988 0.94 0.99 15898 99402
chr17 41717756 41739322 - MEOX1 ENSG00000005102.8 41739322 0.9 0.95 15899 17068
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24848[chr17:41656262-41656390]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results