EnhancerDB
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  3. vista24853[chr17:41686923-41687254]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24853[chr17:41686923-41687254]
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Tissue distribution of vista24853
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Transcription factor that possibly regulate vista24853[chr17:41686923-41687254]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 41686938 41686942 YY1 TRANSFAC yes 21241876
chr17 41686938 41686942 YY1 TRANSFAC yes 54360294
chr17 41686949 41686953 H4TF2 TRANSFAC yes 21241877
chr17 41686949 41686953 H4TF2 TRANSFAC yes 54360295
chr17 41686973 41686991 MAFF JASPAR yes 21241878
chr17 41686973 41686991 MAFF JASPAR yes 54360296
chr17 41686975 41686990 MAFK JASPAR yes 21241879
chr17 41686975 41686990 MAFK JASPAR yes 54360297
chr17 41686978 41686989 BATF JASPAR yes 21241880
chr17 41686978 41686989 BATF JASPAR yes 54360298
chr17 41687005 41687010 ETS2 TRANSFAC yes 21241881
chr17 41687005 41687010 ETS2 TRANSFAC yes 54360299
chr17 41687025 41687029 H4TF2 TRANSFAC yes 21241882
chr17 41687025 41687029 H4TF2 TRANSFAC yes 54360300
chr17 41687030 41687040 TFAP4 JASPAR yes 21241883
chr17 41687030 41687040 TFAP4 JASPAR yes 54360301
chr17 41687068 41687074 MZF1 JASPAR yes 21241884
chr17 41687068 41687074 MZF1 JASPAR yes 54360302
chr17 41687103 41687108 ETS2 TRANSFAC yes 21241885
chr17 41687103 41687108 ETS2 TRANSFAC yes 54360303
chr17 41687107 41687113 HiNF-A TRANSFAC yes 21241886
chr17 41687107 41687113 HiNF-A TRANSFAC yes 54360304
chr17 41687110 41687121 DMRT3 JASPAR yes 21241887
chr17 41687110 41687121 DMRT3 JASPAR yes 54360305
chr17 41687114 41687117 MYB TRANSFAC yes 21241888
chr17 41687114 41687117 MYB TRANSFAC yes 54360306
chr17 41687126 41687133 GATA3 TRANSFAC yes 21241889
chr17 41687126 41687133 GATA3 TRANSFAC yes 54360307
chr17 41687126 41687134 GATA5 JASPAR yes 21241890
chr17 41687126 41687134 GATA5 JASPAR yes 54360308
chr17 41687127 41687141 SPI1 JASPAR yes 21241891
chr17 41687127 41687141 SPI1 JASPAR yes 54360309
chr17 41687129 41687132 MYB TRANSFAC yes 21241892
chr17 41687129 41687132 MYB TRANSFAC yes 54360310
chr17 41687141 41687147 MAZ TRANSFAC yes 21241893
chr17 41687141 41687147 MAZ TRANSFAC yes 54360311
chr17 41687142 41687152 MZF1 JASPAR yes 21241894
chr17 41687142 41687152 MZF1 JASPAR yes 54360312
chr17 41687146 41687150 LFA1 TRANSFAC yes 21241895
chr17 41687146 41687150 LFA1 TRANSFAC yes 54360313
chr17 41687150 41687155 ETS2 TRANSFAC yes 21241896
chr17 41687150 41687155 ETS2 TRANSFAC yes 54360314
chr17 41687158 41687174 POU4F3 JASPAR yes 21241897
chr17 41687158 41687174 POU4F3 JASPAR yes 54360315
chr17 41687165 41687179 POU4F1 JASPAR yes 21241898
chr17 41687165 41687179 POU4F1 JASPAR yes 54360316
chr17 41687165 41687181 POU4F2 JASPAR yes 21241899
chr17 41687165 41687181 POU4F3 JASPAR yes 21241900
chr17 41687165 41687181 POU4F2 JASPAR yes 54360317
chr17 41687165 41687181 POU4F3 JASPAR yes 54360318
chr17 41687171 41687176 ETS2 TRANSFAC yes 21241901
chr17 41687171 41687176 ETS2 TRANSFAC yes 54360319
chr17 41687178 41687182 LFA1 TRANSFAC yes 21241902
chr17 41687178 41687182 LFA1 TRANSFAC yes 54360320
chr17 41687184 41687188 NFE TRANSFAC yes 21241903
chr17 41687184 41687188 NFE TRANSFAC yes 54360321
chr17 41687184 41687189 GATA1 TRANSFAC yes 21241904
chr17 41687184 41687189 GATA1 TRANSFAC yes 54360322
chr17 41687184 41687190 GATA3 JASPAR yes 21241905
chr17 41687184 41687190 GATA3 JASPAR yes 54360323
chr17 41687184 41687194 GATA1 TRANSFAC yes 21241906
chr17 41687184 41687194 GATA1 TRANSFAC yes 54360324
chr17 41687195 41687204 ELK4 JASPAR yes 21241907
chr17 41687195 41687204 ELK4 JASPAR yes 54360325
chr17 41687195 41687205 ELK1 JASPAR yes 21241908
chr17 41687195 41687205 ELK3 JASPAR yes 21241909
chr17 41687195 41687205 ERG JASPAR yes 21241910
chr17 41687195 41687205 ETS1 JASPAR yes 21241911
chr17 41687195 41687205 ETV1 JASPAR yes 21241912
chr17 41687195 41687205 ETV3 JASPAR yes 21241913
chr17 41687195 41687205 ETV4 JASPAR yes 21241914
chr17 41687195 41687205 ETV5 JASPAR yes 21241915
chr17 41687195 41687205 FEV JASPAR yes 21241916
chr17 41687195 41687205 FLI1 JASPAR yes 21241917
chr17 41687195 41687205 ELK1 JASPAR yes 54360326
chr17 41687195 41687205 ELK3 JASPAR yes 54360327
chr17 41687195 41687205 ERG JASPAR yes 54360328
chr17 41687195 41687205 ETS1 JASPAR yes 54360329
chr17 41687195 41687205 ETV1 JASPAR yes 54360330
chr17 41687195 41687205 ETV3 JASPAR yes 54360331
chr17 41687195 41687205 ETV4 JASPAR yes 54360332
chr17 41687195 41687205 ETV5 JASPAR yes 54360333
chr17 41687195 41687205 FEV JASPAR yes 54360334
chr17 41687195 41687205 FLI1 JASPAR yes 54360335
chr17 41687202 41687216 PLAG1 JASPAR yes 21241918
chr17 41687202 41687216 PLAG1 JASPAR yes 54360336
chr17 41687212 41687233 IRF1 JASPAR yes 21241919
chr17 41687212 41687233 IRF1 JASPAR yes 54360337
chr17 41687214 41687229 STAT2 JASPAR yes 21241920
chr17 41687214 41687229 STAT2 JASPAR yes 54360338
chr17 41687215 41687229 STAT1 JASPAR yes 21241921
chr17 41687215 41687229 STAT1 JASPAR yes 54360339
chr17 41687216 41687228 IRF1 JASPAR yes 21241922
chr17 41687216 41687228 IRF1 JASPAR yes 54360340
chr17 41687216 41687231 IRF9 JASPAR yes 21241923
chr17 41687216 41687231 IRF9 JASPAR yes 54360341
chr17 41687223 41687237 TCF7L2 JASPAR yes 21241924
chr17 41687223 41687237 TCF7L2 JASPAR yes 54360342
chr17 41687226 41687232 LEF1 TRANSFAC yes 21241925
chr17 41687226 41687232 TCF4 TRANSFAC yes 21241926
chr17 41687226 41687232 LEF1 TRANSFAC yes 54360343
chr17 41687226 41687232 TCF4 TRANSFAC yes 54360344
chr17 41687227 41687238 DMRT3 JASPAR yes 21241927
chr17 41687227 41687238 DMRT3 JASPAR yes 54360345
chr17 41687229 41687250 IRF1 JASPAR yes 21241928
chr17 41687229 41687250 IRF1 JASPAR yes 54360346
chr17 41687231 41687246 PRDM1 JASPAR yes 21241929
chr17 41687231 41687246 STAT2 JASPAR yes 21241930
chr17 41687231 41687246 PRDM1 JASPAR yes 54360347
chr17 41687231 41687246 STAT2 JASPAR yes 54360348
chr17 41687231 41687252 IRF1 JASPAR yes 21241931
chr17 41687231 41687252 IRF1 JASPAR yes 54360349
chr17 41687234 41687249 FOXP1 JASPAR yes 21241932
chr17 41687234 41687249 FOXP1 JASPAR yes 54360350
chr17 41687235 41687250 FOXP1 JASPAR yes 21241933
chr17 41687235 41687250 FOXP1 JASPAR yes 54360351
chr17 41687236 41687251 FOXP1 JASPAR yes 21241934
chr17 41687236 41687251 FOXP1 JASPAR yes 54360352
chr17 41687237 41687252 FOXP1 JASPAR yes 21241935
chr17 41687237 41687252 FOXP1 JASPAR yes 54360353
chr17 41687238 41687253 FOXP1 JASPAR yes 21241936
chr17 41687238 41687253 FOXP1 JASPAR yes 54360354
chr17 41687239 41687254 FOXP1 JASPAR yes 21241937
chr17 41687239 41687254 FOXP1 JASPAR yes 54360355
SNP sites on vista24853[chr17:41686923-41687254]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 41686952 rs550880276 T G
H4TF2
4884739
chr17 41687016 rs4309445 A G no 4884740
chr17 41687066 rs116197293 A G no 4884741
chr17 41687075 rs113804426 G A,C no 4884742
chr17 41687077 rs188467383 G A,T no 4884743
chr17 41687171 rs557203454 T A
ETS2 POU4F1 POU4F2 POU4F3
4884744
chr17 41687234 rs200180559 A AC
DMRT3 FOXP1 IRF1 PRDM1 STAT2 TCF7L2
4884745
Genes possibly regulated by vista24853[chr17:41686923-41687254]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 41605212 41656988 - ETV4 ENSG00000175832.8 41656988 0.94 0.99 15898 70065
chr17 41717756 41739322 - MEOX1 ENSG00000005102.8 41739322 0.9 0.95 15899 47932
Expression level of Genes
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miRNAs possibly regulated by vista24853[chr17:41686923-41687254]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results