EnhancerDB
  1. Home
  2. Enhancers
  3. vista24874[chr17:42343917-42344252]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24874[chr17:42343917-42344252]
Back to top
Tissue distribution of vista24874
Back to top
Transcription factor that possibly regulate vista24874[chr17:42343917-42344252]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42343586 42344801 POLR2A UCSC Txn Factor no Conserved 107688087
chr17 42343586 42344801 POLR2A UCSC Txn Factor no Conserved 108262393
chr17 42343761 42344459 GATA1 UCSC Txn Factor no Conserved 107688091
chr17 42343761 42344459 GATA1 UCSC Txn Factor no Conserved 108262397
chr17 42343874 42344424 GATA2 UCSC Txn Factor no Conserved 107688094
chr17 42343874 42344424 GATA2 UCSC Txn Factor no Conserved 108262400
chr17 42343891 42344275 EP300 UCSC Txn Factor no Conserved 107688098
chr17 42343891 42344275 EP300 UCSC Txn Factor no Conserved 108262404
chr17 42343893 42344354 ZNF274 UCSC Txn Factor no Conserved 107688101
chr17 42343893 42344354 ZNF274 UCSC Txn Factor no Conserved 108262407
chr17 42343917 42344307 TAL1 UCSC Txn Factor no Conserved 107688104
chr17 42343917 42344307 TAL1 UCSC Txn Factor no Conserved 108262410
chr17 42343926 42344322 TEAD4 UCSC Txn Factor no Conserved 107688108
chr17 42343926 42344322 TEAD4 UCSC Txn Factor no Conserved 108262414
chr17 42343927 42344246 CCNT2 UCSC Txn Factor no Conserved 107688110
chr17 42343927 42344246 CCNT2 UCSC Txn Factor no Conserved 108262416
chr17 42343928 42344235 HMGN3 UCSC Txn Factor no Conserved 107688112
chr17 42343928 42344235 HMGN3 UCSC Txn Factor no Conserved 108262418
chr17 42343939 42344309 PML UCSC Txn Factor no Conserved 107688115
chr17 42343939 42344309 PML UCSC Txn Factor no Conserved 108262421
chr17 42343943 42344298 GABPA UCSC Txn Factor no Conserved 107688117
chr17 42343943 42344298 GABPA UCSC Txn Factor no Conserved 108262423
chr17 42343947 42344296 NR2F2 UCSC Txn Factor no Conserved 107688120
chr17 42343947 42344296 NR2F2 UCSC Txn Factor no Conserved 108262426
chr17 42343961 42344267 ETS1 UCSC Txn Factor no Conserved 107688127
chr17 42343961 42344267 ETS1 UCSC Txn Factor no Conserved 108262433
chr17 42343996 42344235 STAT5A UCSC Txn Factor no Conserved 107688136
chr17 42343996 42344235 STAT5A UCSC Txn Factor no Conserved 108262442
chr17 42343999 42344239 TRIM28 UCSC Txn Factor no Conserved 107688138
chr17 42343999 42344239 TRIM28 UCSC Txn Factor no Conserved 108262444
chr17 42344098 42344537 CTCF UCSC Txn Factor no Conserved 107688154
chr17 42344098 42344537 CTCF UCSC Txn Factor no Conserved 108262460
chr17 42343916 42343925 SOX9 JASPAR yes 13933
chr17 42343916 42343925 SOX9 JASPAR yes 21242798
chr17 42343930 42343938 EHF JASPAR yes 13934
chr17 42343930 42343938 EHF JASPAR yes 21242799
chr17 42343955 42343976 ZNF263 JASPAR yes 13935
chr17 42343955 42343976 ZNF263 JASPAR yes 21242800
chr17 42343964 42343985 ZNF263 JASPAR yes 13936
chr17 42343964 42343985 ZNF263 JASPAR yes 21242801
chr17 42343968 42343983 FOXP1 JASPAR yes 13937
chr17 42343968 42343983 FOXP1 JASPAR yes 21242802
chr17 42343971 42343982 FOXP2 JASPAR yes 13938
chr17 42343971 42343982 FOXP2 JASPAR yes 21242803
chr17 42343972 42343980 FOXO3 JASPAR yes 13939
chr17 42343972 42343980 FOXO3 JASPAR yes 21242804
chr17 42343989 42343996 JUN TRANSFAC yes 13940
chr17 42343989 42343996 JUN TRANSFAC yes 21242805
chr17 42343995 42344000 MYC TRANSFAC yes 13941
chr17 42343995 42344000 MYC TRANSFAC yes 21242806
chr17 42344021 42344035 RORA JASPAR yes 13942
chr17 42344021 42344035 RORA JASPAR yes 21242807
chr17 42344022 42344032 RORA JASPAR yes 13943
chr17 42344022 42344032 RORA JASPAR yes 21242808
chr17 42344050 42344055 SP1 TRANSFAC yes 13944
chr17 42344050 42344055 SP1 TRANSFAC yes 21242809
chr17 42344050 42344056 SP1 TRANSFAC yes 13945
chr17 42344050 42344056 SP1 TRANSFAC yes 21242810
chr17 42344050 42344057 SP1 TRANSFAC yes 13946
chr17 42344050 42344057 SP1 TRANSFAC yes 21242811
chr17 42344055 42344067 NHLH1 JASPAR yes 13947
chr17 42344055 42344067 NHLH1 JASPAR yes 21242812
chr17 42344056 42344066 NHLH1 JASPAR yes 13948
chr17 42344056 42344066 NHLH1 JASPAR yes 21242813
chr17 42344056 42344071 TFAP2C JASPAR yes 13949
chr17 42344056 42344071 TFAP2C JASPAR yes 21242814
chr17 42344084 42344098 GATA2 JASPAR yes 13950
chr17 42344084 42344098 GATA2 JASPAR yes 21242815
chr17 42344086 42344092 GATA1 TRANSFAC yes 13951
chr17 42344086 42344092 GATA1 TRANSFAC yes 21242816
chr17 42344086 42344094 GATA5 JASPAR yes 13952
chr17 42344086 42344094 GATA5 JASPAR yes 21242817
chr17 42344106 42344127 REST JASPAR yes 13953
chr17 42344106 42344127 REST JASPAR yes 21242818
chr17 42344110 42344116 NFE2 TRANSFAC yes 13954
chr17 42344110 42344116 NFE2 TRANSFAC yes 21242819
chr17 42344129 42344147 NFYA JASPAR yes 13955
chr17 42344129 42344147 NFYA JASPAR yes 21242820
chr17 42344135 42344148 ZBTB18 JASPAR yes 13956
chr17 42344135 42344148 ZBTB18 JASPAR yes 21242821
chr17 42344136 42344146 FIGLA JASPAR yes 13957
chr17 42344136 42344146 ID4 JASPAR yes 13958
chr17 42344136 42344146 TCF3 JASPAR yes 13959
chr17 42344136 42344146 TCF4 JASPAR yes 13960
chr17 42344136 42344146 FIGLA JASPAR yes 21242822
chr17 42344136 42344146 ID4 JASPAR yes 21242823
chr17 42344136 42344146 TCF3 JASPAR yes 21242824
chr17 42344136 42344146 TCF4 JASPAR yes 21242825
chr17 42344138 42344143 USF2 TRANSFAC yes 13961
chr17 42344138 42344143 USF2 TRANSFAC yes 21242826
chr17 42344167 42344185 SRF JASPAR yes 13962
chr17 42344167 42344185 SRF JASPAR yes 21242827
chr17 42344169 42344185 SRF JASPAR yes 13963
chr17 42344169 42344185 SRF JASPAR yes 21242828
chr17 42344169 42344186 RARA JASPAR yes 13964
chr17 42344169 42344186 RARA JASPAR yes 21242829
chr17 42344172 42344186 GATA2 JASPAR yes 13965
chr17 42344172 42344186 GATA2 JASPAR yes 21242830
chr17 42344174 42344182 GATA3 JASPAR yes 13966
chr17 42344174 42344182 GATA5 JASPAR yes 13967
chr17 42344174 42344182 GATA3 JASPAR yes 21242831
chr17 42344174 42344182 GATA5 JASPAR yes 21242832
chr17 42344213 42344225 NHLH1 JASPAR yes 13968
chr17 42344213 42344225 NHLH1 JASPAR yes 21242833
chr17 42344213 42344226 ZBTB18 JASPAR yes 13969
chr17 42344213 42344226 ZBTB18 JASPAR yes 21242834
chr17 42344214 42344224 NHLH1 JASPAR yes 13970
chr17 42344214 42344224 NHLH1 JASPAR yes 21242835
chr17 42344221 42344226 ETS2 TRANSFAC yes 13971
chr17 42344221 42344226 ETS2 TRANSFAC yes 21242836
chr17 42344230 42344241 E2F4 JASPAR yes 13972
chr17 42344230 42344241 E2F6 JASPAR yes 13973
chr17 42344230 42344241 E2F4 JASPAR yes 21242837
chr17 42344230 42344241 E2F6 JASPAR yes 21242838
chr17 42344231 42344236 SP1 TRANSFAC yes 13974
chr17 42344231 42344236 SP1 TRANSFAC yes 21242839
chr17 42344234 42344244 SP1 JASPAR yes 13975
chr17 42344234 42344244 SP1 JASPAR yes 21242840
chr17 42344239 42344252 NFKB1 JASPAR yes 13976
chr17 42344239 42344252 NFKB1 JASPAR yes 21242841
SNP sites on vista24874[chr17:42343917-42344252]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42343987 rs117463506 C A,G
CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HMGN3 NR2F2 PML POLR2A TAL1 TEAD4 ZNF274
4888904
chr17 42344015 rs933167 C A,T
CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HMGN3 NR2F2 PML POLR2A STAT5A TAL1 TEAD4 TRIM28 ZNF274
4888905
chr17 42344134 rs539803071 C G
CCNT2 CTCF EP300 ETS1 GABPA GATA1 GATA2 HMGN3 NFYA NR2F2 PML POLR2A STAT5A TAL1 TEAD4 TRIM28 ZNF274
4888906
Genes possibly regulated by vista24874[chr17:42343917-42344252]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42247815 42256451 + ASB16 ENSG00000161664.2 42247815 0.66 1.0 15916 3898
chr17 42264338 42269099 + TMUB2 ENSG00000168591.11 42264338 0.61 1.0 15917 20421
chr17 42269173 42277481 - ATXN7L3 ENSG00000087152.11 42277481 0.6 1.0 15918 33564
chr17 42282401 42298994 - UBTF ENSG00000108312.10 42298994 0.74 0.99 15919 55077
chr17 42325753 42345509 - SLC4A1 ENSG00000004939.9 42345509 0.93 0.97 15920 98743
chr17 42325758 42327236 - AC003102.1 ENSG00000214921.2 42327236 0.97 0.96 15921 83319
chr17 42335297 42355825 + AC003043.1 ENSG00000268413.1 42335297 0.0 0.0 15922 91380
chr17 42385781 42396039 + RUNDC3A ENSG00000108309.8 42385781 0.83 1.0 15923 58471
chr17 42396993 42402238 - SLC25A39 ENSG00000013306.11 42402238 0.66 1.0 15924 42014
chr17 42422614 42430470 + GRN ENSG00000030582.12 42422614 0.72 1.0 15925 21638
chr17 42430583 42441243 - FAM171A2 ENSG00000161682.10 42441243 0.94 1.0 15926 3009
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24874[chr17:42343917-42344252]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 42285140 42285162 - hsa-miR-6782-3p MIMAT0027465 42298246 0.008226288931902165 0.916667 0.0 709
Expression level of miRNAs
Back to top