EnhancerDB
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  3. vista24876[chr17:42347402-42347673]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24876[chr17:42347402-42347673]
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Tissue distribution of vista24876
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Transcription factor that possibly regulate vista24876[chr17:42347402-42347673]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42347402 42347414 PKNOX1 JASPAR yes 21242853
chr17 42347402 42347414 PKNOX2 JASPAR yes 21242854
chr17 42347402 42347414 TGIF1 JASPAR yes 21242855
chr17 42347402 42347414 TGIF2 JASPAR yes 21242856
chr17 42347403 42347413 MSC JASPAR yes 21242857
chr17 42347409 42347421 INSM1 JASPAR yes 21242858
chr17 42347428 42347439 DUX4 JASPAR yes 21242859
chr17 42347429 42347442 ATF4 JASPAR yes 21242860
chr17 42347429 42347444 JUND JASPAR yes 21242861
chr17 42347430 42347443 JUN JASPAR yes 21242862
chr17 42347434 42347447 ZBTB18 JASPAR yes 21242863
chr17 42347441 42347453 TFAP2A JASPAR yes 21242864
chr17 42347445 42347455 MZF1 JASPAR yes 21242865
chr17 42347445 42347457 E2F8 JASPAR yes 21242866
chr17 42347459 42347471 TAL1 JASPAR yes 21242867
chr17 42347459 42347472 ZBTB18 JASPAR yes 21242868
chr17 42347461 42347471 MSC JASPAR yes 21242869
chr17 42347461 42347471 MYF6 JASPAR yes 21242870
chr17 42347461 42347471 TFAP4 JASPAR yes 21242871
chr17 42347461 42347473 TAL1 JASPAR yes 21242872
chr17 42347483 42347502 CTCF JASPAR yes 21242873
chr17 42347489 42347501 INSM1 JASPAR yes 21242874
chr17 42347547 42347557 NFATC3 JASPAR yes 21242875
chr17 42347555 42347565 SREBF1 JASPAR yes 21242876
chr17 42347556 42347564 MGA JASPAR yes 21242877
chr17 42347558 42347570 TAL1 JASPAR yes 21242878
chr17 42347563 42347576 HSF2 JASPAR yes 21242879
chr17 42347567 42347582 HSF1 JASPAR yes 21242880
chr17 42347568 42347581 HSF1 JASPAR yes 21242881
chr17 42347568 42347581 HSF2 JASPAR yes 21242882
chr17 42347568 42347581 HSF4 JASPAR yes 21242883
chr17 42347578 42347597 RFX2 JASPAR yes 21242884
chr17 42347615 42347618 MYB TRANSFAC yes 21242885
chr17 42347624 42347628 H1TF2 TRANSFAC yes 21242886
chr17 42347624 42347628 NFE TRANSFAC yes 21242887
chr17 42347624 42347628 SRF TRANSFAC yes 21242888
chr17 42347624 42347635 ESRRA JASPAR yes 21242889
chr17 42347633 42347637 YY1 TRANSFAC yes 21242890
chr17 42347636 42347657 IRF1 JASPAR yes 21242891
chr17 42347637 42347658 IRF1 JASPAR yes 21242892
chr17 42347638 42347659 IRF1 JASPAR yes 21242893
chr17 42347639 42347654 FOXP1 JASPAR yes 21242894
chr17 42347639 42347660 IRF1 JASPAR yes 21242895
chr17 42347640 42347661 IRF1 JASPAR yes 21242896
chr17 42347641 42347656 FOXP1 JASPAR yes 21242897
chr17 42347641 42347662 IRF1 JASPAR yes 21242898
chr17 42347642 42347657 FOXP1 JASPAR yes 21242899
chr17 42347642 42347663 IRF1 JASPAR yes 21242900
chr17 42347643 42347658 FOXP1 JASPAR yes 21242901
chr17 42347643 42347664 IRF1 JASPAR yes 21242902
chr17 42347644 42347659 FOXP1 JASPAR yes 21242903
chr17 42347644 42347665 IRF1 JASPAR yes 21242904
chr17 42347645 42347660 FOXP1 JASPAR yes 21242905
chr17 42347645 42347666 IRF1 JASPAR yes 21242906
chr17 42347646 42347661 FOXP1 JASPAR yes 21242907
chr17 42347646 42347667 IRF1 JASPAR yes 21242908
chr17 42347647 42347662 FOXP1 JASPAR yes 21242909
chr17 42347647 42347668 IRF1 JASPAR yes 21242910
chr17 42347648 42347663 FOXP1 JASPAR yes 21242911
chr17 42347648 42347669 IRF1 JASPAR yes 21242912
chr17 42347649 42347664 FOXP1 JASPAR yes 21242913
chr17 42347649 42347670 IRF1 JASPAR yes 21242914
chr17 42347650 42347665 FOXP1 JASPAR yes 21242915
chr17 42347650 42347671 IRF1 JASPAR yes 21242916
chr17 42347651 42347666 FOXP1 JASPAR yes 21242917
chr17 42347651 42347672 IRF1 JASPAR yes 21242918
chr17 42347652 42347667 FOXP1 JASPAR yes 21242919
chr17 42347653 42347668 FOXP1 JASPAR yes 21242920
chr17 42347654 42347669 FOXP1 JASPAR yes 21242921
chr17 42347655 42347670 FOXP1 JASPAR yes 21242922
chr17 42347656 42347671 FOXP1 JASPAR yes 21242923
chr17 42347657 42347672 FOXP1 JASPAR yes 21242924
chr17 42347658 42347673 FOXP1 JASPAR yes 21242925
SNP sites on vista24876[chr17:42347402-42347673]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42347575 rs189331596 A T
HSF1 HSF2 HSF4
4888932
chr17 42347641 rs549097721 T C
FOXP1 IRF1
4888933
Genes possibly regulated by vista24876[chr17:42347402-42347673]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42247815 42256451 + ASB16 ENSG00000161664.2 42247815 0.66 1.0 15916 413
chr17 42264338 42269099 + TMUB2 ENSG00000168591.11 42264338 0.61 1.0 15917 16936
chr17 42269173 42277481 - ATXN7L3 ENSG00000087152.11 42277481 0.6 1.0 15918 30079
chr17 42282401 42298994 - UBTF ENSG00000108312.10 42298994 0.74 0.99 15919 51592
chr17 42325753 42345509 - SLC4A1 ENSG00000004939.9 42345509 0.93 0.97 15920 98107
chr17 42325758 42327236 - AC003102.1 ENSG00000214921.2 42327236 0.97 0.96 15921 79834
chr17 42335297 42355825 + AC003043.1 ENSG00000268413.1 42335297 0.0 0.0 15922 87895
chr17 42385781 42396039 + RUNDC3A ENSG00000108309.8 42385781 0.83 1.0 15923 61892
chr17 42396993 42402238 - SLC25A39 ENSG00000013306.11 42402238 0.66 1.0 15924 45435
chr17 42422614 42430470 + GRN ENSG00000030582.12 42422614 0.72 1.0 15925 25059
chr17 42430583 42441243 - FAM171A2 ENSG00000161682.10 42441243 0.94 1.0 15926 6430
Expression level of Genes
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miRNAs possibly regulated by vista24876[chr17:42347402-42347673]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results