EnhancerDB
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  3. vista24884[chr17:42425585-42425836]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24884[chr17:42425585-42425836]
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Tissue distribution of vista24884
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Transcription factor that possibly regulate vista24884[chr17:42425585-42425836]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42425495 42425931 MAX UCSC Txn Factor no Conserved 108262793
chr17 42425519 42426228 RUNX3 UCSC Txn Factor no Conserved 108262799
chr17 42425527 42425880 SPI1 UCSC Txn Factor no Conserved 108262801
chr17 42425528 42425844 EBF1 UCSC Txn Factor no Conserved 108262803
chr17 42425571 42425800 IRF4 UCSC Txn Factor no Conserved 108262811
chr17 42425583 42425800 BATF UCSC Txn Factor no Conserved 108262816
chr17 42425640 42425647 SPI1 JASPAR yes 21243273
chr17 42425640 42425647 SPI1 JASPAR yes 54398193
chr17 42425640 42425655 PRDM1 JASPAR yes 21243274
chr17 42425640 42425655 PRDM1 JASPAR yes 54398194
chr17 42425643 42425656 SMAD2 JASPAR yes 21243275
chr17 42425643 42425656 SMAD2 JASPAR yes 54398195
chr17 42425678 42425697 CTCF JASPAR yes 21243276
chr17 42425678 42425697 CTCF JASPAR yes 54398196
chr17 42425685 42425699 JUN JASPAR yes 21243277
chr17 42425685 42425699 JUN JASPAR yes 54398197
chr17 42425688 42425699 FOSL2 JASPAR yes 21243278
chr17 42425688 42425699 JUNB JASPAR yes 21243279
chr17 42425688 42425699 FOSL2 JASPAR yes 54398198
chr17 42425688 42425699 JUNB JASPAR yes 54398199
chr17 42425689 42425700 FOS JASPAR yes 21243280
chr17 42425689 42425700 FOSL1 JASPAR yes 21243281
chr17 42425689 42425700 JUND JASPAR yes 21243282
chr17 42425689 42425700 FOS JASPAR yes 54398200
chr17 42425689 42425700 FOSL1 JASPAR yes 54398201
chr17 42425689 42425700 JUND JASPAR yes 54398202
chr17 42425690 42425697 JUN TRANSFAC yes 21243283
chr17 42425690 42425697 JUN TRANSFAC yes 54398203
chr17 42425691 42425702 BATF JASPAR yes 21243284
chr17 42425691 42425702 BATF JASPAR yes 54398204
chr17 42425701 42425705 LFA1 TRANSFAC yes 21243285
chr17 42425701 42425705 LFA1 TRANSFAC yes 54398205
chr17 42425705 42425718 TFAP2A JASPAR yes 21243286
chr17 42425705 42425718 TFAP2B JASPAR yes 21243287
chr17 42425705 42425718 TFAP2C JASPAR yes 21243288
chr17 42425705 42425718 TFAP2A JASPAR yes 54398206
chr17 42425705 42425718 TFAP2B JASPAR yes 54398207
chr17 42425705 42425718 TFAP2C JASPAR yes 54398208
chr17 42425710 42425719 HIC2 JASPAR yes 21243289
chr17 42425710 42425719 HIC2 JASPAR yes 54398209
chr17 42425713 42425717 LFA1 TRANSFAC yes 21243290
chr17 42425713 42425717 LFA1 TRANSFAC yes 54398210
chr17 42425716 42425726 CLOCK JASPAR yes 21243291
chr17 42425716 42425726 MAX JASPAR yes 21243292
chr17 42425716 42425726 CLOCK JASPAR yes 54398211
chr17 42425716 42425726 MAX JASPAR yes 54398212
chr17 42425717 42425727 MAX JASPAR yes 21243293
chr17 42425717 42425727 MAX JASPAR yes 54398213
chr17 42425718 42425723 MYC TRANSFAC yes 21243294
chr17 42425718 42425723 USF1 TRANSFAC yes 21243295
chr17 42425718 42425723 USF2 TRANSFAC yes 21243296
chr17 42425718 42425723 MYC TRANSFAC yes 54398214
chr17 42425718 42425723 USF1 TRANSFAC yes 54398215
chr17 42425718 42425723 USF2 TRANSFAC yes 54398216
chr17 42425718 42425725 USF1 JASPAR yes 21243297
chr17 42425718 42425725 USF1 JASPAR yes 54398217
chr17 42425729 42425742 ZBTB18 JASPAR yes 21243298
chr17 42425729 42425742 ZBTB18 JASPAR yes 54398218
chr17 42425732 42425745 ZBTB18 JASPAR yes 21243299
chr17 42425732 42425745 ZBTB18 JASPAR yes 54398219
chr17 42425733 42425744 USF2 JASPAR yes 21243300
chr17 42425733 42425744 USF2 JASPAR yes 54398220
chr17 42425734 42425744 MAX JASPAR yes 21243301
chr17 42425734 42425744 MAX JASPAR yes 54398221
chr17 42425740 42425758 IRF2 JASPAR yes 21243302
chr17 42425740 42425758 IRF2 JASPAR yes 54398222
chr17 42425741 42425762 IRF1 JASPAR yes 21243303
chr17 42425741 42425762 IRF1 JASPAR yes 54398223
chr17 42425743 42425758 PRDM1 JASPAR yes 21243304
chr17 42425743 42425758 STAT2 JASPAR yes 21243305
chr17 42425743 42425758 PRDM1 JASPAR yes 54398224
chr17 42425743 42425758 STAT2 JASPAR yes 54398225
chr17 42425744 42425758 STAT1 JASPAR yes 21243306
chr17 42425744 42425758 STAT1 JASPAR yes 54398226
chr17 42425745 42425757 IRF1 JASPAR yes 21243307
chr17 42425745 42425757 IRF1 JASPAR yes 54398227
chr17 42425745 42425759 IRF8 JASPAR yes 21243308
chr17 42425745 42425759 IRF8 JASPAR yes 54398228
chr17 42425745 42425760 IRF9 JASPAR yes 21243309
chr17 42425745 42425760 IRF9 JASPAR yes 54398229
chr17 42425770 42425786 SOX4 JASPAR yes 21243310
chr17 42425770 42425786 SOX4 JASPAR yes 54398230
chr17 42425771 42425786 SOX21 JASPAR yes 21243311
chr17 42425771 42425786 SOX21 JASPAR yes 54398231
chr17 42425773 42425788 NR2C2 JASPAR yes 21243312
chr17 42425773 42425788 NR2C2 JASPAR yes 54398232
chr17 42425774 42425788 NR2F1 JASPAR yes 21243313
chr17 42425774 42425788 NR2F1 JASPAR yes 54398233
chr17 42425775 42425785 SP1 JASPAR yes 21243314
chr17 42425775 42425785 SP1 JASPAR yes 54398234
chr17 42425776 42425780 LFA1 TRANSFAC yes 21243315
chr17 42425776 42425780 LFA1 TRANSFAC yes 54398235
chr17 42425776 42425796 TP63 JASPAR yes 21243316
chr17 42425776 42425796 TP63 JASPAR yes 54398236
chr17 42425808 42425828 RREB1 JASPAR yes 21243317
chr17 42425808 42425828 RREB1 JASPAR yes 54398237
SNP sites on vista24884[chr17:42425585-42425836]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista24884[chr17:42425585-42425836]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42325753 42345509 - SLC4A1 ENSG00000004939.9 42345509 0.93 0.97 15920 19924
chr17 42325758 42327236 - AC003102.1 ENSG00000214921.2 42327236 0.97 0.96 15921 1651
chr17 42335297 42355825 + AC003043.1 ENSG00000268413.1 42335297 0.0 0.0 15922 9712
chr17 42385781 42396039 + RUNDC3A ENSG00000108309.8 42385781 0.83 1.0 15923 60196
chr17 42396993 42402238 - SLC25A39 ENSG00000013306.11 42402238 0.66 1.0 15924 76653
chr17 42422614 42430470 + GRN ENSG00000030582.12 42422614 0.72 1.0 15925 97029
chr17 42430583 42441243 - FAM171A2 ENSG00000161682.10 42441243 0.94 1.0 15926 84593
chr17 42449548 42466873 - ITGA2B ENSG00000005961.13 42466873 0.9 1.0 15927 58963
Expression level of Genes
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miRNAs possibly regulated by vista24884[chr17:42425585-42425836]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results