EnhancerDB
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  3. vista24886[chr17:42589268-42589584]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24886[chr17:42589268-42589584]
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Tissue distribution of vista24886
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Transcription factor that possibly regulate vista24886[chr17:42589268-42589584]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42589285 42589300 FOXA1 JASPAR yes 21243333
chr17 42589287 42589300 POU2F2 JASPAR yes 21243334
chr17 42589287 42589301 POU1F1 JASPAR yes 21243335
chr17 42589288 42589300 POU3F1 JASPAR yes 21243336
chr17 42589288 42589300 POU3F2 JASPAR yes 21243337
chr17 42589288 42589301 POU3F3 JASPAR yes 21243338
chr17 42589289 42589293 YY1 TRANSFAC yes 21243339
chr17 42589289 42589300 FOXA1 JASPAR yes 21243340
chr17 42589289 42589301 POU2F1 JASPAR yes 21243341
chr17 42589290 42589297 POU2F1 TRANSFAC yes 21243342
chr17 42589290 42589297 POU2F2C TRANSFAC yes 21243343
chr17 42589290 42589297 POU2F2 TRANSFAC yes 21243344
chr17 42589290 42589298 POU2F1 TRANSFAC yes 21243345
chr17 42589290 42589299 POU3F4 JASPAR yes 21243346
chr17 42589290 42589299 POU5F1B JASPAR yes 21243347
chr17 42589292 42589306 POU4F1 JASPAR yes 21243348
chr17 42589292 42589308 POU4F2 JASPAR yes 21243349
chr17 42589310 42589321 E2F6 JASPAR yes 21243350
chr17 42589311 42589316 SP1 TRANSFAC yes 21243351
chr17 42589314 42589320 MAZ TRANSFAC yes 21243352
chr17 42589320 42589330 MSC JASPAR yes 21243353
chr17 42589347 42589365 TP53 JASPAR yes 21243354
chr17 42589348 42589363 TP53 JASPAR yes 21243355
chr17 42589349 42589364 TP53 JASPAR yes 21243356
chr17 42589363 42589367 H1TF2 TRANSFAC yes 21243357
chr17 42589363 42589367 NFE TRANSFAC yes 21243358
chr17 42589363 42589367 SRF TRANSFAC yes 21243359
chr17 42589378 42589391 POU2F2 JASPAR yes 21243360
chr17 42589379 42589388 POU3F4 JASPAR yes 21243361
chr17 42589379 42589388 POU5F1B JASPAR yes 21243362
chr17 42589380 42589387 POU2F1 TRANSFAC yes 21243363
chr17 42589380 42589387 POU2F2 TRANSFAC yes 21243364
chr17 42589397 42589411 PLAG1 JASPAR yes 21243365
chr17 42589428 42589445 BCL6B JASPAR yes 21243366
chr17 42589430 42589435 GATA2 JASPAR yes 21243367
chr17 42589447 42589461 SPI1 JASPAR yes 21243368
chr17 42589447 42589461 SPIC JASPAR yes 21243369
chr17 42589481 42589485 NFE TRANSFAC yes 21243370
chr17 42589488 42589500 INSM1 JASPAR yes 21243371
chr17 42589489 42589499 MZF1 JASPAR yes 21243372
chr17 42589500 42589521 ZNF263 JASPAR yes 21243373
chr17 42589503 42589524 ZNF263 JASPAR yes 21243374
chr17 42589504 42589509 ETS2 TRANSFAC yes 21243375
chr17 42589510 42589514 NFE TRANSFAC yes 21243376
chr17 42589520 42589528 EHF JASPAR yes 21243377
chr17 42589522 42589527 ETS2 TRANSFAC yes 21243378
chr17 42589528 42589538 NFIA JASPAR yes 21243379
chr17 42589530 42589536 NFIC JASPAR yes 21243380
chr17 42589531 42589541 ALX3 JASPAR yes 21243381
chr17 42589531 42589541 ESX1 JASPAR yes 21243382
chr17 42589531 42589541 GBX2 JASPAR yes 21243383
chr17 42589531 42589541 GSX1 JASPAR yes 21243384
chr17 42589531 42589541 GSX2 JASPAR yes 21243385
chr17 42589531 42589541 HESX1 JASPAR yes 21243386
chr17 42589531 42589541 LBX2 JASPAR yes 21243387
chr17 42589531 42589541 LHX2 JASPAR yes 21243388
chr17 42589531 42589541 MIXL1 JASPAR yes 21243389
chr17 42589531 42589541 MNX1 JASPAR yes 21243390
chr17 42589531 42589541 RAX JASPAR yes 21243391
chr17 42589532 42589536 H1TF2 TRANSFAC yes 21243392
chr17 42589532 42589536 NFE TRANSFAC yes 21243393
chr17 42589532 42589536 SRF TRANSFAC yes 21243394
chr17 42589532 42589540 BARX1 JASPAR yes 21243395
chr17 42589532 42589540 BSX JASPAR yes 21243396
chr17 42589532 42589540 DLX6 JASPAR yes 21243397
chr17 42589532 42589540 ISX JASPAR yes 21243398
chr17 42589532 42589540 LBX1 JASPAR yes 21243399
chr17 42589532 42589540 LHX9 JASPAR yes 21243400
chr17 42589532 42589540 MSX1 JASPAR yes 21243401
chr17 42589532 42589540 MSX2 JASPAR yes 21243402
chr17 42589532 42589540 NKX6-2 JASPAR yes 21243403
chr17 42589532 42589540 PRRX1 JASPAR yes 21243404
chr17 42589532 42589540 RAX2 JASPAR yes 21243405
chr17 42589532 42589540 SHOX JASPAR yes 21243406
chr17 42589532 42589540 UNCX JASPAR yes 21243407
chr17 42589532 42589542 HOXA13 JASPAR yes 21243408
chr17 42589532 42589542 HOXB13 JASPAR yes 21243409
chr17 42589532 42589542 HOXD13 JASPAR yes 21243410
chr17 42589554 42589569 RUNX2 JASPAR yes 21243411
chr17 42589554 42589575 IRF1 JASPAR yes 21243412
chr17 42589555 42589570 MEF2C JASPAR yes 21243413
chr17 42589555 42589576 IRF1 JASPAR yes 21243414
chr17 42589556 42589576 RREB1 JASPAR yes 21243415
chr17 42589556 42589577 IRF1 JASPAR yes 21243416
chr17 42589558 42589573 FOXP1 JASPAR yes 21243417
chr17 42589559 42589574 FOXP1 JASPAR yes 21243418
chr17 42589559 42589580 IRF1 JASPAR yes 21243419
chr17 42589560 42589575 FOXP1 JASPAR yes 21243420
chr17 42589560 42589581 IRF1 JASPAR yes 21243421
chr17 42589561 42589576 FOXP1 JASPAR yes 21243422
chr17 42589561 42589582 IRF1 JASPAR yes 21243423
chr17 42589562 42589577 FOXP1 JASPAR yes 21243424
chr17 42589562 42589583 IRF1 JASPAR yes 21243425
chr17 42589563 42589578 FOXP1 JASPAR yes 21243426
chr17 42589563 42589584 IRF1 JASPAR yes 21243427
chr17 42589564 42589579 FOXP1 JASPAR yes 21243428
chr17 42589566 42589581 FOXP1 JASPAR yes 21243429
chr17 42589568 42589583 FOXP1 JASPAR yes 21243430
SNP sites on vista24886[chr17:42589268-42589584]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42589478 rs3924066 C T no 4890061
Genes possibly regulated by vista24886[chr17:42589268-42589584]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42472652 42580798 - GPATCH8 ENSG00000186566.7 42580798 0.63 1.0 15928 91530
chr17 42634925 42636907 + FZD2 ENSG00000180340.5 42634925 0.87 1.0 15929 54659
Expression level of Genes
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miRNAs possibly regulated by vista24886[chr17:42589268-42589584]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results