EnhancerDB
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  3. vista24889[chr17:42619909-42620020]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24889[chr17:42619909-42620020]
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Tissue distribution of vista24889
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Transcription factor that possibly regulate vista24889[chr17:42619909-42620020]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42619914 42619927 ELF1 JASPAR yes 21243491
chr17 42619914 42619927 ELF1 JASPAR yes 54405473
chr17 42619917 42619927 GABPA JASPAR yes 21243492
chr17 42619917 42619927 GABPA JASPAR yes 54405474
chr17 42619917 42619928 FLI1 JASPAR yes 21243493
chr17 42619917 42619928 FLI1 JASPAR yes 54405475
chr17 42619926 42619947 ZNF263 JASPAR yes 21243494
chr17 42619926 42619947 ZNF263 JASPAR yes 54405476
chr17 42619930 42619944 PLAG1 JASPAR yes 21243495
chr17 42619930 42619944 PLAG1 JASPAR yes 54405477
chr17 42619934 42619954 RREB1 JASPAR yes 21243496
chr17 42619934 42619954 RREB1 JASPAR yes 54405478
chr17 42619938 42619948 SP1 JASPAR yes 21243497
chr17 42619938 42619948 SP1 JASPAR yes 54405479
chr17 42619939 42619959 RREB1 JASPAR yes 21243498
chr17 42619939 42619959 RREB1 JASPAR yes 54405480
chr17 42619941 42619946 SP1 TRANSFAC yes 21243499
chr17 42619941 42619946 SP1 TRANSFAC yes 54405481
chr17 42619942 42619952 ZNF740 JASPAR yes 21243500
chr17 42619942 42619952 ZNF740 JASPAR yes 54405482
chr17 42619944 42619954 SP1 JASPAR yes 21243501
chr17 42619944 42619954 SP1 JASPAR yes 54405483
chr17 42619947 42619952 SP1 TRANSFAC yes 21243502
chr17 42619947 42619952 SP1 TRANSFAC yes 54405484
chr17 42619950 42619960 SP1 JASPAR yes 21243503
chr17 42619950 42619960 SP1 JASPAR yes 54405485
chr17 42619951 42619961 SP1 JASPAR yes 21243504
chr17 42619951 42619961 SP1 JASPAR yes 54405486
chr17 42619952 42619956 LFA1 TRANSFAC yes 21243505
chr17 42619952 42619956 LFA1 TRANSFAC yes 54405487
chr17 42619956 42619968 E2F1 JASPAR yes 21243506
chr17 42619956 42619968 E2F1 JASPAR yes 54405488
chr17 42619957 42619968 E2F1 JASPAR yes 21243507
chr17 42619957 42619968 E2F1 JASPAR yes 54405489
chr17 42619977 42619981 NFE TRANSFAC yes 21243508
chr17 42619977 42619981 NFE TRANSFAC yes 54405490
chr17 42619990 42620002 FOXI1 JASPAR yes 21243509
chr17 42619990 42620002 FOXI1 JASPAR yes 54405491
chr17 42619993 42619997 YY1 TRANSFAC yes 21243510
chr17 42619993 42619997 YY1 TRANSFAC yes 54405492
chr17 42620004 42620008 LFA1 TRANSFAC yes 21243511
chr17 42620004 42620008 LFA1 TRANSFAC yes 54405493
SNP sites on vista24889[chr17:42619909-42620020]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista24889[chr17:42619909-42620020]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42472652 42580798 - GPATCH8 ENSG00000186566.7 42580798 0.63 1.0 15928 60889
chr17 42634925 42636907 + FZD2 ENSG00000180340.5 42634925 0.87 1.0 15929 85095
Expression level of Genes
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miRNAs possibly regulated by vista24889[chr17:42619909-42620020]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results