EnhancerDB
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  3. vista24890[chr17:42620579-42620851]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24890[chr17:42620579-42620851]
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Tissue distribution of vista24890
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Transcription factor that possibly regulate vista24890[chr17:42620579-42620851]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42620459 42621528 EP300 UCSC Txn Factor no Conserved 108262998
chr17 42620459 42621528 EP300 UCSC Txn Factor no Conserved 108262999
chr17 42620467 42620879 TCF12 UCSC Txn Factor no Conserved 108263000
chr17 42620552 42620766 TEAD4 UCSC Txn Factor no Conserved 108263017
chr17 42620610 42620624 PLAG1 JASPAR yes 21243512
chr17 42620610 42620624 PLAG1 JASPAR yes 54405589
chr17 42620633 42620651 NR3C1 JASPAR yes 21243513
chr17 42620633 42620651 NR3C1 JASPAR yes 54405590
chr17 42620678 42620683 ETS2 TRANSFAC yes 21243514
chr17 42620678 42620683 ETS2 TRANSFAC yes 54405591
chr17 42620695 42620702 SP1 TRANSFAC yes 21243515
chr17 42620695 42620702 SP1 TRANSFAC yes 54405592
chr17 42620695 42620705 SP1 JASPAR yes 21243516
chr17 42620695 42620705 SP1 JASPAR yes 54405593
chr17 42620696 42620704 SP1 TRANSFAC yes 21243517
chr17 42620696 42620704 SP1 TRANSFAC yes 54405594
chr17 42620696 42620705 SP1 TRANSFAC yes 21243518
chr17 42620696 42620705 SP1 TRANSFAC yes 54405595
chr17 42620696 42620706 SP1 JASPAR yes 21243519
chr17 42620696 42620706 SP1 JASPAR yes 54405596
chr17 42620697 42620702 SP1 TRANSFAC yes 21243520
chr17 42620697 42620702 SP1 TRANSFAC yes 54405597
chr17 42620698 42620703 SP1 TRANSFAC yes 21243521
chr17 42620698 42620703 SP1 TRANSFAC yes 54405598
chr17 42620698 42620704 SP1 TRANSFAC yes 21243522
chr17 42620698 42620704 SP1 TRANSFAC yes 54405599
chr17 42620712 42620716 LFA1 TRANSFAC yes 21243523
chr17 42620712 42620716 LFA1 TRANSFAC yes 54405600
chr17 42620716 42620731 TFAP2C JASPAR yes 21243524
chr17 42620716 42620731 TFAP2C JASPAR yes 54405601
chr17 42620721 42620732 STAT3 JASPAR yes 21243525
chr17 42620721 42620732 STAT3 JASPAR yes 54405602
chr17 42620726 42620731 ETS2 TRANSFAC yes 21243526
chr17 42620726 42620731 ETS2 TRANSFAC yes 54405603
chr17 42620729 42620734 ETS2 TRANSFAC yes 21243527
chr17 42620729 42620734 ETS2 TRANSFAC yes 54405604
chr17 42620748 42620755 CEBPA TRANSFAC yes 21243528
chr17 42620748 42620755 CEBPA TRANSFAC yes 54405605
chr17 42620749 42620760 E2F6 JASPAR yes 21243529
chr17 42620749 42620760 E2F6 JASPAR yes 54405606
chr17 42620753 42620758 ETS2 TRANSFAC yes 21243530
chr17 42620753 42620758 ETS2 TRANSFAC yes 54405607
chr17 42620768 42620785 RXRA JASPAR yes 21243531
chr17 42620768 42620785 RXRA JASPAR yes 54405608
chr17 42620770 42620778 EHF JASPAR yes 21243532
chr17 42620770 42620778 EHF JASPAR yes 54405609
chr17 42620787 42620793 ZNF354C JASPAR yes 21243533
chr17 42620787 42620793 ZNF354C JASPAR yes 54405610
chr17 42620814 42620827 ATF4 JASPAR yes 21243534
chr17 42620814 42620827 ATF4 JASPAR yes 54405611
chr17 42620825 42620836 NFKB1 JASPAR yes 21243535
chr17 42620825 42620836 NFKB1 JASPAR yes 54405612
chr17 42620830 42620840 ZNF740 JASPAR yes 21243536
chr17 42620830 42620840 ZNF740 JASPAR yes 54405613
chr17 42620830 42620844 GLIS2 JASPAR yes 21243537
chr17 42620830 42620844 GLIS3 JASPAR yes 21243538
chr17 42620830 42620844 GLIS2 JASPAR yes 54405614
chr17 42620830 42620844 GLIS3 JASPAR yes 54405615
chr17 42620843 42620849 NFE2 TRANSFAC yes 21243539
chr17 42620843 42620849 NFE2 TRANSFAC yes 54405616
SNP sites on vista24890[chr17:42620579-42620851]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42620784 rs114565474 C A
EP300 RXRA TCF12
4890301
chr17 42620838 rs115422207 C A,G
EP300 GLIS2 GLIS3 TCF12 ZNF740
4890302
Genes possibly regulated by vista24890[chr17:42620579-42620851]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42472652 42580798 - GPATCH8 ENSG00000186566.7 42580798 0.63 1.0 15928 60219
chr17 42634925 42636907 + FZD2 ENSG00000180340.5 42634925 0.87 1.0 15929 85926
Expression level of Genes
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miRNAs possibly regulated by vista24890[chr17:42620579-42620851]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results