EnhancerDB
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  3. vista24896[chr17:42706147-42706421]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24896[chr17:42706147-42706421]
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Tissue distribution of vista24896
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Transcription factor that possibly regulate vista24896[chr17:42706147-42706421]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 42706153 42706165 ELF1 JASPAR yes 21243811
chr17 42706153 42706165 ELF1 JASPAR yes 54411427
chr17 42706156 42706164 FEV JASPAR yes 21243812
chr17 42706156 42706164 FEV JASPAR yes 54411428
chr17 42706175 42706190 IRF9 JASPAR yes 21243813
chr17 42706175 42706190 IRF9 JASPAR yes 54411429
chr17 42706176 42706190 IRF8 JASPAR yes 21243814
chr17 42706176 42706190 IRF8 JASPAR yes 54411430
chr17 42706180 42706194 PAX6 JASPAR yes 21243815
chr17 42706180 42706194 PAX6 JASPAR yes 54411431
chr17 42706183 42706199 T JASPAR yes 21243816
chr17 42706183 42706199 T JASPAR yes 54411432
chr17 42706191 42706206 STAT1 JASPAR yes 21243817
chr17 42706191 42706206 STAT1 JASPAR yes 54411433
chr17 42706193 42706204 STAT1 JASPAR yes 21243818
chr17 42706193 42706204 STAT3 JASPAR yes 21243819
chr17 42706193 42706204 STAT1 JASPAR yes 54411434
chr17 42706193 42706204 STAT3 JASPAR yes 54411435
chr17 42706197 42706205 EHF JASPAR yes 21243820
chr17 42706197 42706205 EHF JASPAR yes 54411436
chr17 42706203 42706208 ETS2 TRANSFAC yes 21243821
chr17 42706203 42706208 ETS2 TRANSFAC yes 54411437
chr17 42706222 42706243 IRF1 JASPAR yes 21243822
chr17 42706222 42706243 IRF1 JASPAR yes 54411438
chr17 42706224 42706235 DMRT3 JASPAR yes 21243823
chr17 42706224 42706235 DMRT3 JASPAR yes 54411439
chr17 42706239 42706252 ELF1 JASPAR yes 21243824
chr17 42706239 42706252 ELF1 JASPAR yes 54411440
chr17 42706240 42706252 ELF1 JASPAR yes 21243825
chr17 42706240 42706252 ELF4 JASPAR yes 21243826
chr17 42706240 42706252 ELF1 JASPAR yes 54411441
chr17 42706240 42706252 ELF4 JASPAR yes 54411442
chr17 42706241 42706244 MYB TRANSFAC yes 21243827
chr17 42706241 42706244 MYB TRANSFAC yes 54411443
chr17 42706241 42706252 ELF5 JASPAR yes 21243828
chr17 42706241 42706252 ETV2 JASPAR yes 21243829
chr17 42706241 42706252 ELF5 JASPAR yes 54411444
chr17 42706241 42706252 ETV2 JASPAR yes 54411445
chr17 42706242 42706252 ELK1 JASPAR yes 21243830
chr17 42706242 42706252 ELK3 JASPAR yes 21243831
chr17 42706242 42706252 ERF JASPAR yes 21243832
chr17 42706242 42706252 ERG JASPAR yes 21243833
chr17 42706242 42706252 ETS1 JASPAR yes 21243834
chr17 42706242 42706252 ETV1 JASPAR yes 21243835
chr17 42706242 42706252 ETV3 JASPAR yes 21243836
chr17 42706242 42706252 ETV4 JASPAR yes 21243837
chr17 42706242 42706252 ETV5 JASPAR yes 21243838
chr17 42706242 42706252 ETV6 JASPAR yes 21243839
chr17 42706242 42706252 FEV JASPAR yes 21243840
chr17 42706242 42706252 FLI1 JASPAR yes 21243841
chr17 42706242 42706252 GABPA JASPAR yes 21243842
chr17 42706242 42706252 ELK1 JASPAR yes 54411446
chr17 42706242 42706252 ELK3 JASPAR yes 54411447
chr17 42706242 42706252 ERF JASPAR yes 54411448
chr17 42706242 42706252 ERG JASPAR yes 54411449
chr17 42706242 42706252 ETS1 JASPAR yes 54411450
chr17 42706242 42706252 ETV1 JASPAR yes 54411451
chr17 42706242 42706252 ETV3 JASPAR yes 54411452
chr17 42706242 42706252 ETV4 JASPAR yes 54411453
chr17 42706242 42706252 ETV5 JASPAR yes 54411454
chr17 42706242 42706252 ETV6 JASPAR yes 54411455
chr17 42706242 42706252 FEV JASPAR yes 54411456
chr17 42706242 42706252 FLI1 JASPAR yes 54411457
chr17 42706242 42706252 GABPA JASPAR yes 54411458
chr17 42706242 42706253 ELK4 JASPAR yes 21243843
chr17 42706242 42706253 FLI1 JASPAR yes 21243844
chr17 42706242 42706253 ELK4 JASPAR yes 54411459
chr17 42706242 42706253 FLI1 JASPAR yes 54411460
chr17 42706244 42706250 ETS1 JASPAR yes 21243845
chr17 42706244 42706250 SPI1 JASPAR yes 21243846
chr17 42706244 42706250 ETS1 JASPAR yes 54411461
chr17 42706244 42706250 SPI1 JASPAR yes 54411462
chr17 42706287 42706297 ZNF740 JASPAR yes 21243847
chr17 42706287 42706297 ZNF740 JASPAR yes 54411463
chr17 42706316 42706320 YY1 TRANSFAC yes 21243848
chr17 42706316 42706320 YY1 TRANSFAC yes 54411464
chr17 42706317 42706329 IRF1 JASPAR yes 21243849
chr17 42706317 42706329 IRF1 JASPAR yes 54411465
chr17 42706317 42706331 IRF7 JASPAR yes 21243850
chr17 42706317 42706331 IRF7 JASPAR yes 54411466
chr17 42706319 42706325 TCF4 TRANSFAC yes 21243851
chr17 42706319 42706325 TCF4 TRANSFAC yes 54411467
chr17 42706319 42706334 FOXP1 JASPAR yes 21243852
chr17 42706319 42706334 FOXP1 JASPAR yes 54411468
chr17 42706320 42706329 SRY JASPAR yes 21243853
chr17 42706320 42706329 SRY JASPAR yes 54411469
chr17 42706320 42706331 FOXP2 JASPAR yes 21243854
chr17 42706320 42706331 FOXP2 JASPAR yes 54411470
chr17 42706322 42706330 FOXO3 JASPAR yes 21243855
chr17 42706322 42706330 FOXO3 JASPAR yes 54411471
chr17 42706337 42706351 STAT1 JASPAR yes 21243856
chr17 42706337 42706351 STAT1 JASPAR yes 54411472
chr17 42706347 42706367 ESR1 JASPAR yes 21243857
chr17 42706347 42706367 ESR1 JASPAR yes 54411473
chr17 42706351 42706368 NR3C1 JASPAR yes 21243858
chr17 42706351 42706368 NR3C1 JASPAR yes 54411474
chr17 42706360 42706364 NFE TRANSFAC yes 21243859
chr17 42706360 42706364 NFE TRANSFAC yes 54411475
chr17 42706370 42706375 SP1 TRANSFAC yes 21243860
chr17 42706370 42706375 SP1 TRANSFAC yes 54411476
chr17 42706371 42706383 INSM1 JASPAR yes 21243861
chr17 42706371 42706383 INSM1 JASPAR yes 54411477
chr17 42706386 42706396 HOXA13 JASPAR yes 21243862
chr17 42706386 42706396 HOXB13 JASPAR yes 21243863
chr17 42706386 42706396 HOXD13 JASPAR yes 21243864
chr17 42706386 42706396 HOXA13 JASPAR yes 54411478
chr17 42706386 42706396 HOXB13 JASPAR yes 54411479
chr17 42706386 42706396 HOXD13 JASPAR yes 54411480
chr17 42706388 42706392 TEAD2 TRANSFAC yes 21243865
chr17 42706388 42706392 TEAD2 TRANSFAC yes 54411481
chr17 42706388 42706393 TBP TRANSFAC yes 21243866
chr17 42706388 42706393 TBP TRANSFAC yes 54411482
chr17 42706388 42706394 TFIID TRANSFAC yes 21243867
chr17 42706388 42706394 TFIID TRANSFAC yes 54411483
chr17 42706405 42706419 GLIS2 JASPAR yes 21243868
chr17 42706405 42706419 GLIS3 JASPAR yes 21243869
chr17 42706405 42706419 GLIS2 JASPAR yes 54411484
chr17 42706405 42706419 GLIS3 JASPAR yes 54411485
chr17 42706406 42706416 SP1 JASPAR yes 21243870
chr17 42706406 42706416 ZNF740 JASPAR yes 21243871
chr17 42706406 42706416 SP1 JASPAR yes 54411486
chr17 42706406 42706416 ZNF740 JASPAR yes 54411487
chr17 42706407 42706417 ZNF740 JASPAR yes 21243872
chr17 42706407 42706417 ZNF740 JASPAR yes 54411488
chr17 42706415 42706420 ETS2 TRANSFAC yes 21243873
chr17 42706415 42706420 ETS2 TRANSFAC yes 54411489
chr17 42706417 42706427 RELA JASPAR yes 21243874
chr17 42706417 42706427 RELA JASPAR yes 54411490
chr17 42706417 42706435 IRF2 JASPAR yes 21243875
chr17 42706417 42706435 IRF2 JASPAR yes 54411491
SNP sites on vista24896[chr17:42706147-42706421]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 42706408 rs530583986 C T
GLIS2 GLIS3 SP1 ZNF740
4891092
chr17 42706412 rs147937649 C G,T
GLIS2 GLIS3 SP1 ZNF740
4891093
chr17 42706415 rs114821069 C A,G,T
ETS2 GLIS2 GLIS3 SP1 ZNF740
4891094
Genes possibly regulated by vista24896[chr17:42706147-42706421]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42634925 42636907 + FZD2 ENSG00000180340.5 42634925 0.87 1.0 15929 28778
chr17 42733762 42767676 + C17orf104 ENSG00000180336.13 42733762 0.86 1.0 15930 72659
chr17 42750437 42767147 - CCDC43 ENSG00000180329.9 42767147 0.62 0.99 15931 39274
chr17 42785976 42829632 + DBF4B ENSG00000161692.13 42785976 0.8 1.0 15932 20445
Expression level of Genes
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miRNAs possibly regulated by vista24896[chr17:42706147-42706421]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results