EnhancerDB
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  3. vista24902[chr17:43034960-43035346]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24902[chr17:43034960-43035346]
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Tissue distribution of vista24902
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Transcription factor that possibly regulate vista24902[chr17:43034960-43035346]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43034901 43035136 GATA2 UCSC Txn Factor no Conserved 108263450
chr17 43034970 43034990 TP53 JASPAR yes 21244127
chr17 43034977 43034989 INSM1 JASPAR yes 21244128
chr17 43034985 43034995 HOXA13 JASPAR yes 21244129
chr17 43034985 43034995 HOXB13 JASPAR yes 21244130
chr17 43034985 43034995 HOXD13 JASPAR yes 21244131
chr17 43034985 43034996 HOXA10 JASPAR yes 21244132
chr17 43034986 43034995 CDX1 JASPAR yes 21244133
chr17 43034992 43035007 RUNX2 JASPAR yes 21244134
chr17 43035000 43035005 TFAP2A TRANSFAC yes 21244135
chr17 43035000 43035006 MZF1 JASPAR yes 21244136
chr17 43035003 43035014 GCM1 JASPAR yes 21244137
chr17 43035012 43035017 H4TF1 TRANSFAC yes 21244138
chr17 43035035 43035040 ETS2 TRANSFAC yes 21244139
chr17 43035038 43035043 ETS2 TRANSFAC yes 21244140
chr17 43035048 43035052 YY1 TRANSFAC yes 21244141
chr17 43035049 43035061 POU2F1 JASPAR yes 21244142
chr17 43035049 43035062 POU3F3 JASPAR yes 21244143
chr17 43035049 43035063 POU1F1 JASPAR yes 21244144
chr17 43035050 43035062 POU3F1 JASPAR yes 21244145
chr17 43035050 43035062 POU3F2 JASPAR yes 21244146
chr17 43035051 43035062 PROP1 JASPAR yes 21244147
chr17 43035052 43035067 MEF2A JASPAR yes 21244148
chr17 43035053 43035068 MEF2C JASPAR yes 21244149
chr17 43035054 43035066 MEF2A JASPAR yes 21244150
chr17 43035054 43035066 MEF2B JASPAR yes 21244151
chr17 43035054 43035066 MEF2D JASPAR yes 21244152
chr17 43035056 43035067 PHOX2A JASPAR yes 21244153
chr17 43035056 43035067 PROP1 JASPAR yes 21244154
chr17 43035058 43035068 HOXD13 JASPAR yes 21244155
chr17 43035058 43035069 HOXA10 JASPAR yes 21244156
chr17 43035072 43035085 ZBTB18 JASPAR yes 21244157
chr17 43035073 43035083 MSC JASPAR yes 21244158
chr17 43035086 43035107 ZNF263 JASPAR yes 21244159
chr17 43035087 43035108 ZNF263 JASPAR yes 21244160
chr17 43035088 43035093 ETS2 TRANSFAC yes 21244161
chr17 43035090 43035111 ZNF263 JASPAR yes 21244162
chr17 43035094 43035115 ZNF263 JASPAR yes 21244163
chr17 43035095 43035116 ZNF263 JASPAR yes 21244164
chr17 43035096 43035101 ETS2 TRANSFAC yes 21244165
chr17 43035097 43035118 ZNF263 JASPAR yes 21244166
chr17 43035100 43035121 ZNF263 JASPAR yes 21244167
chr17 43035110 43035115 GATA2 JASPAR yes 21244168
chr17 43035110 43035125 PRDM1 JASPAR yes 21244169
chr17 43035110 43035125 STAT2 JASPAR yes 21244170
chr17 43035110 43035128 IRF2 JASPAR yes 21244171
chr17 43035127 43035146 PAX5 JASPAR yes 21244172
chr17 43035128 43035141 SMAD2 JASPAR yes 21244173
chr17 43035130 43035147 PAX9 JASPAR yes 21244174
chr17 43035134 43035149 TP53 JASPAR yes 21244175
chr17 43035171 43035182 E2F6 JASPAR yes 21244176
chr17 43035180 43035201 ZNF263 JASPAR yes 21244177
chr17 43035184 43035190 SP1 TRANSFAC yes 21244178
chr17 43035184 43035194 SP1 JASPAR yes 21244179
chr17 43035187 43035198 FLI1 JASPAR yes 21244180
chr17 43035189 43035197 EHF JASPAR yes 21244181
chr17 43035194 43035198 NFE TRANSFAC yes 21244182
chr17 43035217 43035222 TFAP2A TRANSFAC yes 21244183
chr17 43035217 43035223 MZF1 JASPAR yes 21244184
chr17 43035217 43035227 SP1 JASPAR yes 21244185
chr17 43035217 43035238 ZNF263 JASPAR yes 21244186
chr17 43035218 43035227 SP1 TRANSFAC yes 21244187
chr17 43035219 43035225 MAZ TRANSFAC yes 21244188
chr17 43035220 43035230 MZF1 JASPAR yes 21244189
chr17 43035224 43035229 ETS2 TRANSFAC yes 21244190
chr17 43035261 43035272 NFKB1 JASPAR yes 21244191
chr17 43035262 43035272 NFKB1 JASPAR yes 21244192
chr17 43035289 43035300 E2F1 JASPAR yes 21244193
chr17 43035293 43035298 SP1 TRANSFAC yes 21244194
chr17 43035295 43035304 TFAP2A JASPAR yes 21244195
chr17 43035300 43035304 LFA1 TRANSFAC yes 21244196
chr17 43035308 43035319 HOXC13 JASPAR yes 21244197
SNP sites on vista24902[chr17:43034960-43035346]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43035059 rs142982816 A G
GATA2 HOXA10 HOXD13 MEF2A MEF2B MEF2C MEF2D PHOX2A POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 PROP1
4892482
chr17 43035140 rs535924142 C A
PAX5 PAX9 SMAD2 TP53
4892483
chr17 43035149 rs554704961 G A
TP53
4892484
chr17 43035285 rs543461169 C G no 4892485
chr17 43035336 rs115298357 G A no 4892486
Genes possibly regulated by vista24902[chr17:43034960-43035346]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 42927311 42977030 - EFTUD2 ENSG00000108883.8 42977030 0.73 0.99 15936 42070
chr17 42976510 42982758 + CCDC103 ENSG00000167131.12 42976510 0.88 1.0 15937 41550
chr17 42977135 42982758 + FAM187A ENSG00000214447.3 42977135 0.86 0.95 15938 42175
chr17 42982376 42994305 - GFAP ENSG00000131095.7 42994305 0.89 0.99 15939 59345
chr17 43002077 43025082 - KIF18B ENSG00000186185.9 43025082 0.95 1.0 15940 90122
chr17 43037061 43045439 - C1QL1 ENSG00000131094.3 43045439 0.86 0.99 15941 89907
chr17 43128978 43186384 + NMT1 ENSG00000136448.7 43128978 0.75 1.0 15943 6368
Expression level of Genes
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miRNAs possibly regulated by vista24902[chr17:43034960-43035346]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 43011986 43012007 - hsa-miR-6783-3p MIMAT0027467 43025140 0.003036789963658087 0.916667 0.0 711
Expression level of miRNAs
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