EnhancerDB
  1. Home
  2. Enhancers
  3. vista24928[chr17:43490897-43491137]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24928[chr17:43490897-43491137]
Back to top
Tissue distribution of vista24928
Back to top
Transcription factor that possibly regulate vista24928[chr17:43490897-43491137]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43490799 43491115 EBF1 UCSC Txn Factor no Conserved 108265065
chr17 43490832 43491087 SPI1 UCSC Txn Factor no Conserved 108265067
chr17 43490898 43490904 TCF4 TRANSFAC yes 21245789
chr17 43490898 43490904 TCF4 TRANSFAC yes 54452909
chr17 43490928 43490942 EBF1 JASPAR yes 21245790
chr17 43490928 43490942 EBF1 JASPAR yes 54452910
chr17 43490935 43490940 TFAP2A TRANSFAC yes 21245791
chr17 43490935 43490940 TFAP2A TRANSFAC yes 54452911
chr17 43490935 43490941 MZF1 JASPAR yes 21245792
chr17 43490935 43490941 MZF1 JASPAR yes 54452912
chr17 43490937 43490954 BCL6B JASPAR yes 21245793
chr17 43490937 43490954 BCL6B JASPAR yes 54452913
chr17 43490939 43490944 NFY TRANSFAC yes 21245794
chr17 43490939 43490944 NFY TRANSFAC yes 54452914
chr17 43490940 43490952 E2F8 JASPAR yes 21245795
chr17 43490940 43490952 E2F8 JASPAR yes 54452915
chr17 43490960 43490974 SPI1 JASPAR yes 21245796
chr17 43490960 43490974 SPI1 JASPAR yes 54452916
chr17 43490975 43490989 SPIC JASPAR yes 21245797
chr17 43490975 43490989 SPIC JASPAR yes 54452917
chr17 43490977 43490997 RREB1 JASPAR yes 21245798
chr17 43490977 43490997 RREB1 JASPAR yes 54452918
chr17 43490983 43491002 PAX5 JASPAR yes 21245799
chr17 43490983 43491002 PAX5 JASPAR yes 54452919
chr17 43490988 43490993 NFY TRANSFAC yes 21245800
chr17 43490988 43490993 NFY TRANSFAC yes 54452920
chr17 43491006 43491021 HNF4A JASPAR yes 21245801
chr17 43491006 43491021 HNF4A JASPAR yes 54452921
chr17 43491007 43491022 HNF4G JASPAR yes 21245802
chr17 43491007 43491022 HNF4G JASPAR yes 54452922
chr17 43491013 43491017 NFE TRANSFAC yes 21245803
chr17 43491013 43491017 NFE TRANSFAC yes 54452923
chr17 43491016 43491022 MZF1 JASPAR yes 21245804
chr17 43491016 43491022 MZF1 JASPAR yes 54452924
chr17 43491020 43491037 RARA JASPAR yes 21245805
chr17 43491020 43491037 RXRA JASPAR yes 21245806
chr17 43491020 43491037 RARA JASPAR yes 54452925
chr17 43491020 43491037 RXRA JASPAR yes 54452926
chr17 43491026 43491041 JUND JASPAR yes 21245807
chr17 43491026 43491041 JUND JASPAR yes 54452927
chr17 43491027 43491040 JUN JASPAR yes 21245808
chr17 43491027 43491040 JUN JASPAR yes 54452928
chr17 43491028 43491042 ATF7 JASPAR yes 21245809
chr17 43491028 43491042 ATF7 JASPAR yes 54452929
chr17 43491029 43491041 JDP2 JASPAR yes 21245810
chr17 43491029 43491041 JDP2 JASPAR yes 54452930
chr17 43491029 43491044 JUND JASPAR yes 21245811
chr17 43491029 43491044 JUND JASPAR yes 54452931
chr17 43491030 43491038 NR4A2 JASPAR yes 21245812
chr17 43491030 43491038 NR4A2 JASPAR yes 54452932
chr17 43491030 43491043 JUN JASPAR yes 21245813
chr17 43491030 43491043 JUN JASPAR yes 54452933
chr17 43491031 43491039 CREB1 JASPAR yes 21245814
chr17 43491031 43491039 CREB1 JASPAR yes 54452934
chr17 43491058 43491073 TFAP2C JASPAR yes 21245815
chr17 43491058 43491073 TFAP2C JASPAR yes 54452935
chr17 43491061 43491072 EBF1 JASPAR yes 21245816
chr17 43491061 43491072 EBF1 JASPAR yes 54452936
chr17 43491067 43491073 SP1 TRANSFAC yes 21245817
chr17 43491067 43491073 SP1 TRANSFAC yes 54452937
chr17 43491067 43491077 SP1 JASPAR yes 21245818
chr17 43491067 43491077 SP1 JASPAR yes 54452938
chr17 43491068 43491073 SP1 TRANSFAC yes 21245819
chr17 43491068 43491073 SP1 TRANSFAC yes 54452939
chr17 43491069 43491074 SP1 TRANSFAC yes 21245820
chr17 43491069 43491074 SP1 TRANSFAC yes 54452940
chr17 43491069 43491075 SP1 TRANSFAC yes 21245821
chr17 43491069 43491075 SP1 TRANSFAC yes 54452941
chr17 43491070 43491090 RREB1 JASPAR yes 21245822
chr17 43491070 43491090 RREB1 JASPAR yes 54452942
chr17 43491073 43491093 RREB1 JASPAR yes 21245823
chr17 43491073 43491093 RREB1 JASPAR yes 54452943
chr17 43491074 43491079 SP1 TRANSFAC yes 21245824
chr17 43491074 43491079 SP1 TRANSFAC yes 54452944
chr17 43491086 43491091 SP1 TRANSFAC yes 21245825
chr17 43491086 43491091 SP1 TRANSFAC yes 54452945
chr17 43491090 43491094 LFA1 TRANSFAC yes 21245826
chr17 43491090 43491094 LFA1 TRANSFAC yes 54452946
chr17 43491091 43491106 TFAP2A JASPAR yes 21245827
chr17 43491091 43491106 TFAP2A JASPAR yes 54452947
chr17 43491122 43491129 NKX3-1 JASPAR yes 21245828
chr17 43491122 43491129 NKX3-1 JASPAR yes 54452948
chr17 43491129 43491142 SMAD2 JASPAR yes 21245829
chr17 43491129 43491142 SMAD2 JASPAR yes 54452949
SNP sites on vista24928[chr17:43490897-43491137]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43490914 rs143336681 G A
EBF1 SPI1
4895975
chr17 43491003 rs34063617 G A
EBF1 SPI1
4895976
chr17 43491073 rs73984393 G A
EBF1 RREB1 SP1 SPI1 TFAP2C
4895977
Genes possibly regulated by vista24928[chr17:43490897-43491137]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 43471275 43511787 - ARHGAP27 ENSG00000159314.7 43511787 0.81 0.94 15950 79350
chr17 43513266 43568115 - PLEKHM1 ENSG00000225190.4 43568115 0.6 0.99 15951 23022
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24928[chr17:43490897-43491137]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results