EnhancerDB
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  3. vista24929[chr17:43505725-43505980]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24929[chr17:43505725-43505980]
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Tissue distribution of vista24929
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Transcription factor that possibly regulate vista24929[chr17:43505725-43505980]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43505396 43505811 CTCF UCSC Txn Factor no Conserved 108265083
chr17 43505468 43505762 SMC3 UCSC Txn Factor no Conserved 108265097
chr17 43505481 43505753 RAD21 UCSC Txn Factor no Conserved 108265100
chr17 43505496 43508412 EZH2 UCSC Txn Factor no Conserved 108265102
chr17 43505726 43505973 SPI1 UCSC Txn Factor no Conserved 108265108
chr17 43505742 43505751 PITX3 JASPAR yes 21245830
chr17 43505742 43505752 GSC2 JASPAR yes 21245831
chr17 43505742 43505752 GSC JASPAR yes 21245832
chr17 43505743 43505751 OTX2 JASPAR yes 21245833
chr17 43505751 43505758 NKX3-1 JASPAR yes 21245834
chr17 43505756 43505767 NRL JASPAR yes 21245835
chr17 43505762 43505781 CTCF JASPAR yes 21245836
chr17 43505769 43505781 HINFP JASPAR yes 21245837
chr17 43505778 43505793 TFAP2A JASPAR yes 21245838
chr17 43505780 43505795 TFAP2A JASPAR yes 21245839
chr17 43505780 43505795 TFAP2C JASPAR yes 21245840
chr17 43505781 43505792 TFAP2A JASPAR yes 21245841
chr17 43505781 43505793 INSM1 JASPAR yes 21245842
chr17 43505782 43505791 TFAP2A JASPAR yes 21245843
chr17 43505790 43505800 HINFP JASPAR yes 21245844
chr17 43505790 43505802 HINFP JASPAR yes 21245845
chr17 43505808 43505818 NKX2-3 JASPAR yes 21245846
chr17 43505809 43505817 ISL2 JASPAR yes 21245847
chr17 43505809 43505818 NKX3-2 JASPAR yes 21245848
chr17 43505813 43505826 SMAD2 JASPAR yes 21245849
chr17 43505817 43505821 NFE TRANSFAC yes 21245850
chr17 43505822 43505832 MSC JASPAR yes 21245851
chr17 43505829 43505840 USF1 JASPAR yes 21245852
chr17 43505829 43505840 USF2 JASPAR yes 21245853
chr17 43505834 43505845 NFE2L2 JASPAR yes 21245854
chr17 43505846 43505856 TFCP2 JASPAR yes 21245855
chr17 43505846 43505864 IRF2 JASPAR yes 21245856
chr17 43505847 43505868 IRF1 JASPAR yes 21245857
chr17 43505849 43505864 STAT2 JASPAR yes 21245858
chr17 43505850 43505864 SPI1 JASPAR yes 21245859
chr17 43505850 43505864 STAT1 JASPAR yes 21245860
chr17 43505892 43505895 MYB TRANSFAC yes 21245861
chr17 43505901 43505906 SP1 TRANSFAC yes 21245862
chr17 43505953 43505957 LFA1 TRANSFAC yes 21245863
SNP sites on vista24929[chr17:43505725-43505980]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43505779 rs115146232 C T
CTCF EZH2 HINFP SPI1 TFAP2A
4896040
chr17 43505853 rs557162671 GT G
EZH2 IRF1 IRF2 SPI1 STAT1 STAT2 TFCP2
4896041
chr17 43505927 rs551846628 G C
EZH2 SPI1
4896042
Genes possibly regulated by vista24929[chr17:43505725-43505980]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 43471275 43511787 - ARHGAP27 ENSG00000159314.7 43511787 0.81 0.94 15950 94193
chr17 43513266 43568115 - PLEKHM1 ENSG00000225190.4 43568115 0.6 0.99 15951 37865
Expression level of Genes
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miRNAs possibly regulated by vista24929[chr17:43505725-43505980]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results