EnhancerDB
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  3. vista24936[chr17:43951029-43951274]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24936[chr17:43951029-43951274]
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Tissue distribution of vista24936
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Transcription factor that possibly regulate vista24936[chr17:43951029-43951274]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43951046 43951060 PAX6 JASPAR yes 21246070
chr17 43951046 43951060 PAX6 JASPAR yes 54467325
chr17 43951065 43951070 GATA2 JASPAR yes 21246071
chr17 43951065 43951070 GATA2 JASPAR yes 54467326
chr17 43951165 43951169 NFE TRANSFAC yes 21246072
chr17 43951165 43951169 NFE TRANSFAC yes 54467327
chr17 43951173 43951190 RARA JASPAR yes 21246073
chr17 43951173 43951190 RXRA JASPAR yes 21246074
chr17 43951173 43951190 RARA JASPAR yes 54467328
chr17 43951173 43951190 RXRA JASPAR yes 54467329
chr17 43951187 43951198 FLI1 JASPAR yes 21246075
chr17 43951187 43951198 FLI1 JASPAR yes 54467330
chr17 43951188 43951192 YY1 TRANSFAC yes 21246076
chr17 43951188 43951192 YY1 TRANSFAC yes 54467331
chr17 43951188 43951199 ELF5 JASPAR yes 21246077
chr17 43951188 43951199 ELF5 JASPAR yes 54467332
chr17 43951188 43951201 ELF1 JASPAR yes 21246078
chr17 43951188 43951201 ELF1 JASPAR yes 54467333
chr17 43951189 43951197 FEV JASPAR yes 21246079
chr17 43951189 43951197 FEV JASPAR yes 54467334
chr17 43951229 43951244 TFAP2C JASPAR yes 21246080
chr17 43951229 43951244 TFAP2C JASPAR yes 54467335
chr17 43951231 43951245 EBF1 JASPAR yes 21246081
chr17 43951231 43951245 EBF1 JASPAR yes 54467336
chr17 43951231 43951246 TFAP2A JASPAR yes 21246082
chr17 43951231 43951246 TFAP2A JASPAR yes 54467337
chr17 43951232 43951243 EBF1 JASPAR yes 21246083
chr17 43951232 43951243 EBF1 JASPAR yes 54467338
chr17 43951244 43951265 MAFG JASPAR yes 21246084
chr17 43951244 43951265 MAFG JASPAR yes 54467339
chr17 43951248 43951259 NFE2L2 JASPAR yes 21246085
chr17 43951248 43951259 NFE2L2 JASPAR yes 54467340
chr17 43951249 43951267 MAFF JASPAR yes 21246086
chr17 43951249 43951267 MAFF JASPAR yes 54467341
chr17 43951253 43951265 PKNOX1 JASPAR yes 21246087
chr17 43951253 43951265 PKNOX2 JASPAR yes 21246088
chr17 43951253 43951265 TGIF1 JASPAR yes 21246089
chr17 43951253 43951265 TGIF2 JASPAR yes 21246090
chr17 43951253 43951265 PKNOX1 JASPAR yes 54467342
chr17 43951253 43951265 PKNOX2 JASPAR yes 54467343
chr17 43951253 43951265 TGIF1 JASPAR yes 54467344
chr17 43951253 43951265 TGIF2 JASPAR yes 54467345
chr17 43951254 43951264 TFAP4 JASPAR yes 21246091
chr17 43951254 43951264 TFAP4 JASPAR yes 54467346
chr17 43951259 43951263 NFE TRANSFAC yes 21246092
chr17 43951259 43951263 NFE TRANSFAC yes 54467347
chr17 43951261 43951272 NRL JASPAR yes 21246093
chr17 43951261 43951272 NRL JASPAR yes 54467348
SNP sites on vista24936[chr17:43951029-43951274]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43951112 rs116370667 C A no 4897772
chr17 43951120 rs62055491 T C no 4897773
chr17 43951134 rs113301155 CCAAA C no 4897774
chr17 43951220 rs34416056 T C,G no 4897775
chr17 43951222 rs149354396 G A no 4897776
Genes possibly regulated by vista24936[chr17:43951029-43951274]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 43922256 43924438 + SPPL2C ENSG00000185294.5 43922256 0.97 0.0 15953 71227
chr17 43971748 44105700 + MAPT ENSG00000186868.11 43971748 0.85 1.0 15954 79526
Expression level of Genes
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miRNAs possibly regulated by vista24936[chr17:43951029-43951274]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results