EnhancerDB
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  3. vista24937[chr17:43993191-43993527]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24937[chr17:43993191-43993527]
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Tissue distribution of vista24937
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Transcription factor that possibly regulate vista24937[chr17:43993191-43993527]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 43993193 43993203 SREBF1 JASPAR yes 21246094
chr17 43993196 43993211 ESR2 JASPAR yes 21246095
chr17 43993205 43993217 PKNOX1 JASPAR yes 21246096
chr17 43993205 43993217 PKNOX2 JASPAR yes 21246097
chr17 43993205 43993217 TGIF1 JASPAR yes 21246098
chr17 43993205 43993217 TGIF2 JASPAR yes 21246099
chr17 43993205 43993218 JUN JASPAR yes 21246100
chr17 43993207 43993219 JDP2 JASPAR yes 21246101
chr17 43993207 43993222 JUND JASPAR yes 21246102
chr17 43993215 43993219 YY1 TRANSFAC yes 21246103
chr17 43993229 43993239 NFIA JASPAR yes 21246104
chr17 43993231 43993237 NFIC JASPAR yes 21246105
chr17 43993263 43993278 PRDM1 JASPAR yes 21246106
chr17 43993274 43993280 MYC TRANSFAC yes 21246107
chr17 43993296 43993307 RUNX1 JASPAR yes 21246108
chr17 43993302 43993306 YY1 TRANSFAC yes 21246109
chr17 43993323 43993341 ESR2 JASPAR yes 21246110
chr17 43993352 43993363 NFKB1 JASPAR yes 21246111
chr17 43993353 43993364 NFKB1 JASPAR yes 21246112
chr17 43993370 43993373 MYB TRANSFAC yes 21246113
chr17 43993370 43993380 HINFP JASPAR yes 21246114
chr17 43993370 43993383 ELF3 JASPAR yes 21246115
chr17 43993373 43993379 ETS1 JASPAR yes 21246116
chr17 43993373 43993379 SPI1 JASPAR yes 21246117
chr17 43993380 43993385 SP1 TRANSFAC yes 21246118
chr17 43993384 43993397 EOMES JASPAR yes 21246119
chr17 43993386 43993396 TBR1 JASPAR yes 21246120
chr17 43993386 43993397 TBX20 JASPAR yes 21246121
chr17 43993386 43993397 TBX2 JASPAR yes 21246122
chr17 43993387 43993397 TBX21 JASPAR yes 21246123
chr17 43993388 43993396 MGA JASPAR yes 21246124
chr17 43993388 43993396 TBX15 JASPAR yes 21246125
chr17 43993388 43993396 TBX1 JASPAR yes 21246126
chr17 43993388 43993396 TBX4 JASPAR yes 21246127
chr17 43993388 43993396 TBX5 JASPAR yes 21246128
chr17 43993392 43993402 SP1 JASPAR yes 21246129
chr17 43993393 43993403 SP1 JASPAR yes 21246130
chr17 43993395 43993404 THAP1 JASPAR yes 21246131
chr17 43993407 43993411 NFE TRANSFAC yes 21246132
chr17 43993415 43993425 SREBF1 JASPAR yes 21246133
chr17 43993415 43993425 SREBF2 JASPAR yes 21246134
chr17 43993425 43993437 GLI2 JASPAR yes 21246135
chr17 43993425 43993437 ZBTB7C JASPAR yes 21246136
chr17 43993469 43993475 MZF1 JASPAR yes 21246137
chr17 43993496 43993511 TFAP2A JASPAR yes 21246138
chr17 43993496 43993511 TFAP2C JASPAR yes 21246139
chr17 43993499 43993511 TFAP2A JASPAR yes 21246140
chr17 43993499 43993511 TFAP2B JASPAR yes 21246141
chr17 43993499 43993511 TFAP2C JASPAR yes 21246142
chr17 43993500 43993509 TFAP2A JASPAR yes 21246143
chr17 43993501 43993510 TFAP2A JASPAR yes 21246144
chr17 43993521 43993526 SP1 TRANSFAC yes 21246145
SNP sites on vista24937[chr17:43993191-43993527]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 43993224 rs149505265 G A no 4897946
chr17 43993255 rs567711181 A G no 4897947
chr17 43993376 rs3785880 T G
ELF3 ETS1 HINFP SPI1
4897948
chr17 43993481 rs371323624 C T no 4897949
Genes possibly regulated by vista24937[chr17:43993191-43993527]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 43922256 43924438 + SPPL2C ENSG00000185294.5 43922256 0.97 0.0 15953 29065
chr17 43971748 44105700 + MAPT ENSG00000186868.11 43971748 0.85 1.0 15954 78557
chr17 44076616 44077060 + STH ENSG00000256762.1 44076616 0.94 0.96 15955 16911
Expression level of Genes
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miRNAs possibly regulated by vista24937[chr17:43993191-43993527]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results