EnhancerDB
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  3. vista24940[chr17:44098039-44098230]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24940[chr17:44098039-44098230]
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Tissue distribution of vista24940
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Transcription factor that possibly regulate vista24940[chr17:44098039-44098230]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 44098049 44098062 NFKB1 JASPAR yes 21246250
chr17 44098049 44098062 NFKB2 JASPAR yes 21246251
chr17 44098049 44098062 NFKB1 JASPAR yes 54473763
chr17 44098049 44098062 NFKB2 JASPAR yes 54473764
chr17 44098050 44098061 NFKB1 JASPAR yes 21246252
chr17 44098050 44098061 NFKB1 JASPAR yes 54473765
chr17 44098050 44098063 NFKB1 JASPAR yes 21246253
chr17 44098050 44098063 NFKB2 JASPAR yes 21246254
chr17 44098050 44098063 NFKB1 JASPAR yes 54473766
chr17 44098050 44098063 NFKB2 JASPAR yes 54473767
chr17 44098051 44098061 NFKB1 JASPAR yes 21246255
chr17 44098051 44098061 RELA JASPAR yes 21246256
chr17 44098051 44098061 NFKB1 JASPAR yes 54473768
chr17 44098051 44098061 RELA JASPAR yes 54473769
chr17 44098051 44098062 NFKB1 JASPAR yes 21246257
chr17 44098051 44098062 NFKB1 JASPAR yes 54473770
chr17 44098052 44098062 NFKB1 JASPAR yes 21246258
chr17 44098052 44098062 REL JASPAR yes 21246259
chr17 44098052 44098062 NFKB1 JASPAR yes 54473771
chr17 44098052 44098062 REL JASPAR yes 54473772
chr17 44098064 44098068 TEAD2 TRANSFAC yes 21246260
chr17 44098064 44098068 TEAD2 TRANSFAC yes 54473773
chr17 44098064 44098069 TBP TRANSFAC yes 21246261
chr17 44098064 44098069 TBP TRANSFAC yes 54473774
chr17 44098064 44098070 TFIID TRANSFAC yes 21246262
chr17 44098064 44098070 TFIID TRANSFAC yes 54473775
chr17 44098097 44098101 NFE TRANSFAC yes 21246263
chr17 44098097 44098101 NFE TRANSFAC yes 54473776
chr17 44098114 44098127 NFKB2 JASPAR yes 21246264
chr17 44098114 44098127 NFKB2 JASPAR yes 54473777
chr17 44098115 44098126 NFKB1 JASPAR yes 21246265
chr17 44098115 44098126 NFKB1 JASPAR yes 54473778
chr17 44098116 44098126 REL JASPAR yes 21246266
chr17 44098116 44098126 REL JASPAR yes 54473779
chr17 44098120 44098136 GLIS1 JASPAR yes 21246267
chr17 44098120 44098136 GLIS1 JASPAR yes 54473780
chr17 44098121 44098135 GLIS3 JASPAR yes 21246268
chr17 44098121 44098135 GLIS3 JASPAR yes 54473781
chr17 44098132 44098145 DUXA JASPAR yes 21246269
chr17 44098132 44098145 DUXA JASPAR yes 54473782
chr17 44098133 44098144 DUX4 JASPAR yes 21246270
chr17 44098133 44098144 PHOX2A JASPAR yes 21246271
chr17 44098133 44098144 PROP1 JASPAR yes 21246272
chr17 44098133 44098144 DUX4 JASPAR yes 54473783
chr17 44098133 44098144 PHOX2A JASPAR yes 54473784
chr17 44098133 44098144 PROP1 JASPAR yes 54473785
chr17 44098136 44098146 ALX3 JASPAR yes 21246273
chr17 44098136 44098146 ALX3 JASPAR yes 54473786
chr17 44098142 44098156 GLIS3 JASPAR yes 21246274
chr17 44098142 44098156 GLIS3 JASPAR yes 54473787
chr17 44098154 44098158 H4TF2 TRANSFAC yes 21246275
chr17 44098154 44098158 H4TF2 TRANSFAC yes 54473788
chr17 44098156 44098173 ZNF410 JASPAR yes 21246276
chr17 44098156 44098173 ZNF410 JASPAR yes 54473789
chr17 44098171 44098187 ZNF143 JASPAR yes 21246277
chr17 44098171 44098187 ZNF143 JASPAR yes 54473790
chr17 44098190 44098208 ESR2 JASPAR yes 21246278
chr17 44098190 44098208 ESR2 JASPAR yes 54473791
chr17 44098203 44098207 YY1 TRANSFAC yes 21246279
chr17 44098203 44098207 YY1 TRANSFAC yes 54473792
chr17 44098209 44098214 SP1 TRANSFAC yes 21246280
chr17 44098209 44098214 SP1 TRANSFAC yes 54473793
chr17 44098211 44098216 TFAP2A TRANSFAC yes 21246281
chr17 44098211 44098216 TFAP2A TRANSFAC yes 54473794
chr17 44098211 44098217 MZF1 JASPAR yes 21246282
chr17 44098211 44098217 MZF1 JASPAR yes 54473795
chr17 44098224 44098240 SRF JASPAR yes 21246283
chr17 44098224 44098240 SRF JASPAR yes 54473796
SNP sites on vista24940[chr17:44098039-44098230]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 44098136 rs560374071 A G
ALX3 DUX4 DUXA GLIS1 PHOX2A PROP1
4898555
Genes possibly regulated by vista24940[chr17:44098039-44098230]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 44076616 44077060 + STH ENSG00000256762.1 44076616 0.94 0.96 15955 78577
Expression level of Genes
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miRNAs possibly regulated by vista24940[chr17:44098039-44098230]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results