EnhancerDB
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  3. vista24949[chr17:44234299-44234706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24949[chr17:44234299-44234706]
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Tissue distribution of vista24949
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Transcription factor that possibly regulate vista24949[chr17:44234299-44234706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 44234301 44234306 MYB TRANSFAC yes 21246486
chr17 44234301 44234306 MYB TRANSFAC yes 54485513
chr17 44234332 44234342 NKX2-3 JASPAR yes 21246487
chr17 44234332 44234342 NKX2-3 JASPAR yes 54485514
chr17 44234333 44234341 ISL2 JASPAR yes 21246488
chr17 44234333 44234341 ISL2 JASPAR yes 54485515
chr17 44234333 44234342 NKX3-2 JASPAR yes 21246489
chr17 44234333 44234342 NKX3-2 JASPAR yes 54485516
chr17 44234336 44234347 FOXP2 JASPAR yes 21246490
chr17 44234336 44234347 FOXP2 JASPAR yes 54485517
chr17 44234338 44234346 FOXO3 JASPAR yes 21246491
chr17 44234338 44234346 FOXO3 JASPAR yes 54485518
chr17 44234358 44234361 MYB TRANSFAC yes 21246492
chr17 44234358 44234361 MYB TRANSFAC yes 54485519
chr17 44234376 44234381 ETS2 TRANSFAC yes 21246493
chr17 44234376 44234381 ETS2 TRANSFAC yes 54485520
chr17 44234378 44234397 CTCF JASPAR yes 21246494
chr17 44234378 44234397 CTCF JASPAR yes 54485521
chr17 44234410 44234420 BARHL2 JASPAR yes 21246495
chr17 44234410 44234420 BARHL2 JASPAR yes 54485522
chr17 44234439 44234449 HOXB2 JASPAR yes 21246496
chr17 44234439 44234449 HOXB3 JASPAR yes 21246497
chr17 44234439 44234449 MNX1 JASPAR yes 21246498
chr17 44234439 44234449 HOXB2 JASPAR yes 54485523
chr17 44234439 44234449 HOXB3 JASPAR yes 54485524
chr17 44234439 44234449 MNX1 JASPAR yes 54485525
chr17 44234440 44234448 LBX1 JASPAR yes 21246499
chr17 44234440 44234448 PDX1 JASPAR yes 21246500
chr17 44234440 44234448 VAX1 JASPAR yes 21246501
chr17 44234440 44234448 VAX2 JASPAR yes 21246502
chr17 44234440 44234448 VSX1 JASPAR yes 21246503
chr17 44234440 44234448 VSX2 JASPAR yes 21246504
chr17 44234440 44234448 LBX1 JASPAR yes 54485526
chr17 44234440 44234448 PDX1 JASPAR yes 54485527
chr17 44234440 44234448 VAX1 JASPAR yes 54485528
chr17 44234440 44234448 VAX2 JASPAR yes 54485529
chr17 44234440 44234448 VSX1 JASPAR yes 54485530
chr17 44234440 44234448 VSX2 JASPAR yes 54485531
chr17 44234448 44234464 SOX4 JASPAR yes 21246505
chr17 44234448 44234464 SOX8 JASPAR yes 21246506
chr17 44234448 44234464 SOX4 JASPAR yes 54485532
chr17 44234448 44234464 SOX8 JASPAR yes 54485533
chr17 44234455 44234470 FOXA1 JASPAR yes 21246507
chr17 44234455 44234470 FOXA1 JASPAR yes 54485534
chr17 44234456 44234468 FOXI1 JASPAR yes 21246508
chr17 44234456 44234468 FOXI1 JASPAR yes 54485535
chr17 44234457 44234469 FOXC2 JASPAR yes 21246509
chr17 44234457 44234469 FOXC2 JASPAR yes 54485536
chr17 44234458 44234466 FOXG1 JASPAR yes 21246510
chr17 44234458 44234466 FOXG1 JASPAR yes 54485537
chr17 44234458 44234469 FOXB1 JASPAR yes 21246511
chr17 44234458 44234469 FOXC1 JASPAR yes 21246512
chr17 44234458 44234469 FOXB1 JASPAR yes 54485538
chr17 44234458 44234469 FOXC1 JASPAR yes 54485539
chr17 44234459 44234470 FOXA1 JASPAR yes 21246513
chr17 44234459 44234470 FOXA1 JASPAR yes 54485540
chr17 44234465 44234469 YY1 TRANSFAC yes 21246514
chr17 44234465 44234469 YY1 TRANSFAC yes 54485541
chr17 44234476 44234487 HOXC13 JASPAR yes 21246515
chr17 44234476 44234487 HOXC13 JASPAR yes 54485542
chr17 44234479 44234485 ETS1 JASPAR yes 21246516
chr17 44234479 44234485 ETS1 JASPAR yes 54485543
chr17 44234480 44234495 HSF1 JASPAR yes 21246517
chr17 44234480 44234495 HSF1 JASPAR yes 54485544
chr17 44234481 44234494 HSF1 JASPAR yes 21246518
chr17 44234481 44234494 HSF2 JASPAR yes 21246519
chr17 44234481 44234494 HSF4 JASPAR yes 21246520
chr17 44234481 44234494 HSF1 JASPAR yes 54485545
chr17 44234481 44234494 HSF2 JASPAR yes 54485546
chr17 44234481 44234494 HSF4 JASPAR yes 54485547
chr17 44234529 44234533 NFE TRANSFAC yes 21246521
chr17 44234529 44234533 NFE TRANSFAC yes 54485548
chr17 44234530 44234535 GATA2 JASPAR yes 21246522
chr17 44234530 44234535 GATA2 JASPAR yes 54485549
chr17 44234535 44234548 JUN JASPAR yes 21246523
chr17 44234535 44234548 JUN JASPAR yes 54485550
chr17 44234540 44234551 NFE2 JASPAR yes 21246524
chr17 44234540 44234551 NFE2 JASPAR yes 54485551
chr17 44234541 44234550 JDP2 JASPAR yes 21246525
chr17 44234541 44234550 JDP2 JASPAR yes 54485552
chr17 44234547 44234551 YY1 TRANSFAC yes 21246526
chr17 44234547 44234551 YY1 TRANSFAC yes 54485553
chr17 44234551 44234566 STAT2 JASPAR yes 21246527
chr17 44234551 44234566 STAT2 JASPAR yes 54485554
chr17 44234553 44234563 NFATC3 JASPAR yes 21246528
chr17 44234553 44234563 NFATC3 JASPAR yes 54485555
chr17 44234565 44234583 SRF JASPAR yes 21246529
chr17 44234565 44234583 SRF JASPAR yes 54485556
chr17 44234567 44234583 SRF JASPAR yes 21246530
chr17 44234567 44234583 SRF JASPAR yes 54485557
chr17 44234567 44234585 SRF JASPAR yes 21246531
chr17 44234567 44234585 SRF JASPAR yes 54485558
chr17 44234569 44234579 GBX2 JASPAR yes 21246532
chr17 44234569 44234579 GBX2 JASPAR yes 54485559
chr17 44234570 44234574 H1TF2 TRANSFAC yes 21246533
chr17 44234570 44234574 NFE TRANSFAC yes 21246534
chr17 44234570 44234574 SRF TRANSFAC yes 21246535
chr17 44234570 44234574 H1TF2 TRANSFAC yes 54485560
chr17 44234570 44234574 NFE TRANSFAC yes 54485561
chr17 44234570 44234574 SRF TRANSFAC yes 54485562
chr17 44234570 44234578 DLX6 JASPAR yes 21246536
chr17 44234570 44234578 MSX2 JASPAR yes 21246537
chr17 44234570 44234578 DLX6 JASPAR yes 54485563
chr17 44234570 44234578 MSX2 JASPAR yes 54485564
chr17 44234570 44234582 SRF JASPAR yes 21246538
chr17 44234570 44234582 SRF JASPAR yes 54485565
chr17 44234572 44234583 RUNX1 JASPAR yes 21246539
chr17 44234572 44234583 RUNX1 JASPAR yes 54485566
chr17 44234577 44234590 NFKB1 JASPAR yes 21246540
chr17 44234577 44234590 NFKB1 JASPAR yes 54485567
chr17 44234580 44234583 MYB TRANSFAC yes 21246541
chr17 44234580 44234583 MYB TRANSFAC yes 54485568
chr17 44234600 44234607 NKX3-1 JASPAR yes 21246542
chr17 44234600 44234607 NKX3-1 JASPAR yes 54485569
chr17 44234616 44234621 ETS2 TRANSFAC yes 21246543
chr17 44234616 44234621 ETS2 TRANSFAC yes 54485570
chr17 44234626 44234630 YY1 TRANSFAC yes 21246544
chr17 44234626 44234630 YY1 TRANSFAC yes 54485571
chr17 44234655 44234666 STAT1 JASPAR yes 21246545
chr17 44234655 44234666 STAT3 JASPAR yes 21246546
chr17 44234655 44234666 STAT1 JASPAR yes 54485572
chr17 44234655 44234666 STAT3 JASPAR yes 54485573
chr17 44234661 44234671 REL JASPAR yes 21246547
chr17 44234661 44234671 REL JASPAR yes 54485574
chr17 44234689 44234694 GATA2 JASPAR yes 21246548
chr17 44234689 44234694 GATA2 JASPAR yes 54485575
SNP sites on vista24949[chr17:44234299-44234706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 44234392 rs572732608 T C
CTCF
4899806
chr17 44234480 rs191675372 C T
ETS1 HOXC13 HSF1
4899807
chr17 44234526 rs1406068 C T no 4899808
chr17 44234584 rs183454645 C T
NFKB1 SRF
4899809
Genes possibly regulated by vista24949[chr17:44234299-44234706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 44107282 44302733 - KANSL1 ENSG00000120071.8 44302733 0.73 0.99 15956 31973
Expression level of Genes
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miRNAs possibly regulated by vista24949[chr17:44234299-44234706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results