EnhancerDB
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  3. vista24953[chr17:44271977-44272219]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24953[chr17:44271977-44272219]
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Tissue distribution of vista24953
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Transcription factor that possibly regulate vista24953[chr17:44271977-44272219]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 44269706 44272493 POLR2A UCSC Txn Factor no Conserved 108265813
chr17 44271971 44272323 RUNX3 UCSC Txn Factor no Conserved 108265823
chr17 44272032 44272248 SPI1 UCSC Txn Factor no Conserved 108265838
chr17 44272041 44272725 CTCF UCSC Txn Factor no Conserved 108265841
chr17 44272003 44272014 BATF JASPAR yes 21246689
chr17 44272003 44272014 BATF JASPAR yes 54489844
chr17 44272013 44272031 NR3C1 JASPAR yes 21246690
chr17 44272013 44272031 NR3C1 JASPAR yes 54489845
chr17 44272016 44272030 ONECUT2 JASPAR yes 21246691
chr17 44272016 44272030 ONECUT2 JASPAR yes 54489846
chr17 44272029 44272040 HOXC11 JASPAR yes 21246692
chr17 44272029 44272040 HOXD12 JASPAR yes 21246693
chr17 44272029 44272040 HOXC11 JASPAR yes 54489847
chr17 44272029 44272040 HOXD12 JASPAR yes 54489848
chr17 44272030 44272040 HOXC10 JASPAR yes 21246694
chr17 44272030 44272040 HOXD11 JASPAR yes 21246695
chr17 44272030 44272040 HOXC10 JASPAR yes 54489849
chr17 44272030 44272040 HOXD11 JASPAR yes 54489850
chr17 44272032 44272036 YY1 TRANSFAC yes 21246696
chr17 44272032 44272036 YY1 TRANSFAC yes 54489851
chr17 44272033 44272051 MAFF JASPAR yes 21246697
chr17 44272033 44272051 MAFF JASPAR yes 54489852
chr17 44272034 44272049 MAFK JASPAR yes 21246698
chr17 44272034 44272049 MAFK JASPAR yes 54489853
chr17 44272051 44272065 GATA2 JASPAR yes 21246699
chr17 44272051 44272065 GATA2 JASPAR yes 54489854
chr17 44272053 44272061 GATA3 JASPAR yes 21246700
chr17 44272053 44272061 GATA5 JASPAR yes 21246701
chr17 44272053 44272061 GATA3 JASPAR yes 54489855
chr17 44272053 44272061 GATA5 JASPAR yes 54489856
chr17 44272081 44272095 SPIC JASPAR yes 21246702
chr17 44272081 44272095 SPIC JASPAR yes 54489857
chr17 44272085 44272095 GABPA JASPAR yes 21246703
chr17 44272085 44272095 GABPA JASPAR yes 54489858
chr17 44272086 44272091 ETS2 TRANSFAC yes 21246704
chr17 44272086 44272091 ETS2 TRANSFAC yes 54489859
chr17 44272101 44272114 EOMES JASPAR yes 21246705
chr17 44272101 44272114 EOMES JASPAR yes 54489860
chr17 44272103 44272113 TBR1 JASPAR yes 21246706
chr17 44272103 44272113 TBR1 JASPAR yes 54489861
chr17 44272103 44272114 TBX20 JASPAR yes 21246707
chr17 44272103 44272114 TBX2 JASPAR yes 21246708
chr17 44272103 44272114 TBX20 JASPAR yes 54489862
chr17 44272103 44272114 TBX2 JASPAR yes 54489863
chr17 44272103 44272123 TBX19 JASPAR yes 21246709
chr17 44272103 44272123 TBX19 JASPAR yes 54489864
chr17 44272104 44272114 TBX21 JASPAR yes 21246710
chr17 44272104 44272114 TBX21 JASPAR yes 54489865
chr17 44272105 44272113 MGA JASPAR yes 21246711
chr17 44272105 44272113 TBX15 JASPAR yes 21246712
chr17 44272105 44272113 TBX1 JASPAR yes 21246713
chr17 44272105 44272113 TBX4 JASPAR yes 21246714
chr17 44272105 44272113 TBX5 JASPAR yes 21246715
chr17 44272105 44272113 MGA JASPAR yes 54489866
chr17 44272105 44272113 TBX15 JASPAR yes 54489867
chr17 44272105 44272113 TBX1 JASPAR yes 54489868
chr17 44272105 44272113 TBX4 JASPAR yes 54489869
chr17 44272105 44272113 TBX5 JASPAR yes 54489870
chr17 44272105 44272121 T JASPAR yes 21246716
chr17 44272105 44272121 T JASPAR yes 54489871
chr17 44272110 44272125 RUNX2 JASPAR yes 21246717
chr17 44272110 44272125 RUNX2 JASPAR yes 54489872
chr17 44272121 44272132 STAT1 JASPAR yes 21246718
chr17 44272121 44272132 STAT1 JASPAR yes 54489873
chr17 44272131 44272135 H1TF2 TRANSFAC yes 21246719
chr17 44272131 44272135 NFE TRANSFAC yes 21246720
chr17 44272131 44272135 SRF TRANSFAC yes 21246721
chr17 44272131 44272135 H1TF2 TRANSFAC yes 54489874
chr17 44272131 44272135 NFE TRANSFAC yes 54489875
chr17 44272131 44272135 SRF TRANSFAC yes 54489876
chr17 44272133 44272144 SPDEF JASPAR yes 21246722
chr17 44272133 44272144 SPDEF JASPAR yes 54489877
chr17 44272135 44272140 GATA2 JASPAR yes 21246723
chr17 44272135 44272140 GATA2 JASPAR yes 54489878
chr17 44272142 44272146 YY1 TRANSFAC yes 21246724
chr17 44272142 44272146 YY1 TRANSFAC yes 54489879
chr17 44272148 44272153 ATF1 TRANSFAC yes 21246725
chr17 44272148 44272153 ATF1 TRANSFAC yes 54489880
chr17 44272152 44272166 SPI1 JASPAR yes 21246726
chr17 44272152 44272166 SPI1 JASPAR yes 54489881
chr17 44272210 44272216 SOX10 JASPAR yes 21246727
chr17 44272210 44272216 SOX10 JASPAR yes 54489882
SNP sites on vista24953[chr17:44271977-44272219]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 44272000 rs2532235 G A
POLR2A RUNX3
4900222
Genes possibly regulated by vista24953[chr17:44271977-44272219]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 44107282 44302733 - KANSL1 ENSG00000120071.8 44302733 0.73 0.99 15956 69486
chr17 44370099 44415160 + LRRC37A ENSG00000176681.10 44370099 0.86 0.96 15958 2120
Expression level of Genes
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miRNAs possibly regulated by vista24953[chr17:44271977-44272219]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results