EnhancerDB
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  3. vista24955[chr17:44342171-44342447]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24955[chr17:44342171-44342447]
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Tissue distribution of vista24955
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Transcription factor that possibly regulate vista24955[chr17:44342171-44342447]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 44342167 44342171 YY1 TRANSFAC yes 21246762
chr17 44342167 44342171 YY1 TRANSFAC yes 54493126
chr17 44342175 44342187 IRF1 JASPAR yes 21246763
chr17 44342175 44342187 IRF1 JASPAR yes 54493127
chr17 44342188 44342192 LFA1 TRANSFAC yes 21246764
chr17 44342188 44342192 LFA1 TRANSFAC yes 54493128
chr17 44342198 44342208 TEAD1 JASPAR yes 21246765
chr17 44342198 44342208 TEAD4 JASPAR yes 21246766
chr17 44342198 44342208 TEAD1 JASPAR yes 54493129
chr17 44342198 44342208 TEAD4 JASPAR yes 54493130
chr17 44342199 44342207 TEAD3 JASPAR yes 21246767
chr17 44342199 44342207 TEAD3 JASPAR yes 54493131
chr17 44342224 44342234 NFKB1 JASPAR yes 21246768
chr17 44342224 44342234 NFKB1 JASPAR yes 54493132
chr17 44342224 44342235 NFKB1 JASPAR yes 21246769
chr17 44342224 44342235 NFKB1 JASPAR yes 54493133
chr17 44342232 44342246 ZIC1 JASPAR yes 21246770
chr17 44342232 44342246 ZIC1 JASPAR yes 54493134
chr17 44342235 44342246 SPDEF JASPAR yes 21246771
chr17 44342235 44342246 SPDEF JASPAR yes 54493135
chr17 44342236 44342247 FLI1 JASPAR yes 21246772
chr17 44342236 44342247 FLI1 JASPAR yes 54493136
chr17 44342237 44342244 PEA3 TRANSFAC yes 21246773
chr17 44342237 44342244 PEA3 TRANSFAC yes 54493137
chr17 44342240 44342250 GCM2 JASPAR yes 21246774
chr17 44342240 44342250 GCM2 JASPAR yes 54493138
chr17 44342253 44342267 RORA JASPAR yes 21246775
chr17 44342253 44342267 RORA JASPAR yes 54493139
chr17 44342278 44342281 MYB TRANSFAC yes 21246776
chr17 44342278 44342281 MYB TRANSFAC yes 54493140
chr17 44342311 44342321 NKX2-3 JASPAR yes 21246777
chr17 44342311 44342321 NKX2-3 JASPAR yes 54493141
chr17 44342312 44342321 NKX2-8 JASPAR yes 21246778
chr17 44342312 44342321 NKX2-8 JASPAR yes 54493142
chr17 44342316 44342330 RORA JASPAR yes 21246779
chr17 44342316 44342330 RORA JASPAR yes 54493143
chr17 44342329 44342350 ZNF263 JASPAR yes 21246780
chr17 44342329 44342350 ZNF263 JASPAR yes 54493144
chr17 44342330 44342340 MAX JASPAR yes 21246781
chr17 44342330 44342340 MAX JASPAR yes 54493145
chr17 44342331 44342341 BHLHE40 JASPAR yes 21246782
chr17 44342331 44342341 BHLHE41 JASPAR yes 21246783
chr17 44342331 44342341 MAX JASPAR yes 21246784
chr17 44342331 44342341 MLXIPL JASPAR yes 21246785
chr17 44342331 44342341 MLX JASPAR yes 21246786
chr17 44342331 44342341 MNT JASPAR yes 21246787
chr17 44342331 44342341 TFE3 JASPAR yes 21246788
chr17 44342331 44342341 BHLHE40 JASPAR yes 54493146
chr17 44342331 44342341 BHLHE41 JASPAR yes 54493147
chr17 44342331 44342341 MAX JASPAR yes 54493148
chr17 44342331 44342341 MLXIPL JASPAR yes 54493149
chr17 44342331 44342341 MLX JASPAR yes 54493150
chr17 44342331 44342341 MNT JASPAR yes 54493151
chr17 44342331 44342341 TFE3 JASPAR yes 54493152
chr17 44342333 44342338 MYC TRANSFAC yes 21246789
chr17 44342333 44342338 USF1 TRANSFAC yes 21246790
chr17 44342333 44342338 USF2 TRANSFAC yes 21246791
chr17 44342333 44342338 MYC TRANSFAC yes 54493153
chr17 44342333 44342338 USF1 TRANSFAC yes 54493154
chr17 44342333 44342338 USF2 TRANSFAC yes 54493155
chr17 44342369 44342384 TFAP2A JASPAR yes 21246792
chr17 44342369 44342384 TFAP2C JASPAR yes 21246793
chr17 44342369 44342384 TFAP2A JASPAR yes 54493156
chr17 44342369 44342384 TFAP2C JASPAR yes 54493157
chr17 44342371 44342384 TFAP2A JASPAR yes 21246794
chr17 44342371 44342384 TFAP2B JASPAR yes 21246795
chr17 44342371 44342384 TFAP2C JASPAR yes 21246796
chr17 44342371 44342384 TFAP2A JASPAR yes 54493158
chr17 44342371 44342384 TFAP2B JASPAR yes 54493159
chr17 44342371 44342384 TFAP2C JASPAR yes 54493160
chr17 44342371 44342386 TFAP2A JASPAR yes 21246797
chr17 44342371 44342386 TFAP2C JASPAR yes 21246798
chr17 44342371 44342386 TFAP2A JASPAR yes 54493161
chr17 44342371 44342386 TFAP2C JASPAR yes 54493162
chr17 44342372 44342384 TFAP2B JASPAR yes 21246799
chr17 44342372 44342384 TFAP2C JASPAR yes 21246800
chr17 44342372 44342384 TFAP2B JASPAR yes 54493163
chr17 44342372 44342384 TFAP2C JASPAR yes 54493164
chr17 44342379 44342383 LFA1 TRANSFAC yes 21246801
chr17 44342379 44342383 LFA1 TRANSFAC yes 54493165
chr17 44342393 44342405 FOXI1 JASPAR yes 21246802
chr17 44342393 44342405 FOXI1 JASPAR yes 54493166
chr17 44342394 44342405 FOXP2 JASPAR yes 21246803
chr17 44342394 44342405 FOXP2 JASPAR yes 54493167
chr17 44342395 44342403 FOXG1 JASPAR yes 21246804
chr17 44342395 44342403 FOXG1 JASPAR yes 54493168
chr17 44342408 44342423 FOXP1 JASPAR yes 21246805
chr17 44342408 44342423 FOXP1 JASPAR yes 54493169
chr17 44342409 44342420 FOXP2 JASPAR yes 21246806
chr17 44342409 44342420 FOXP2 JASPAR yes 54493170
chr17 44342409 44342423 FOXF2 JASPAR yes 21246807
chr17 44342409 44342423 FOXF2 JASPAR yes 54493171
chr17 44342410 44342418 FOXG1 JASPAR yes 21246808
chr17 44342410 44342418 FOXG1 JASPAR yes 54493172
chr17 44342412 44342420 GATA3 JASPAR yes 21246809
chr17 44342412 44342420 GATA3 JASPAR yes 54493173
chr17 44342424 44342428 NFE TRANSFAC yes 21246810
chr17 44342424 44342428 NFE TRANSFAC yes 54493174
chr17 44342425 44342435 SMAD3 JASPAR yes 21246811
chr17 44342425 44342435 SMAD3 JASPAR yes 54493175
chr17 44342433 44342451 ESR2 JASPAR yes 21246812
chr17 44342433 44342451 ESR2 JASPAR yes 54493176
chr17 44342442 44342449 JUN TRANSFAC yes 21246813
chr17 44342442 44342449 JUN TRANSFAC yes 54493177
SNP sites on vista24955[chr17:44342171-44342447]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 44342216 rs545160014 A T no 4900549
chr17 44342327 rs2696437 T G
RORA
4900550
chr17 44342357 rs375113909 G A no 4900551
chr17 44342378 rs4988900 G A
TFAP2A TFAP2B TFAP2C
4900552
chr17 44342404 rs2732676 A C
FOXI1 FOXP2
4900553
chr17 44342444 rs560499732 T C
ESR2 JUN
4900554
Genes possibly regulated by vista24955[chr17:44342171-44342447]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 44107282 44302733 - KANSL1 ENSG00000120071.8 44302733 0.73 0.99 15956 60562
chr17 44352150 44439130 - ARL17B ENSG00000228696.4 44439130 0.82 0.87 15957 3317
chr17 44370099 44415160 + LRRC37A ENSG00000176681.10 44370099 0.86 0.96 15958 72348
Expression level of Genes
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miRNAs possibly regulated by vista24955[chr17:44342171-44342447]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results