EnhancerDB
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  3. vista24958[chr17:44848199-44848613]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24958[chr17:44848199-44848613]
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Tissue distribution of vista24958
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Transcription factor that possibly regulate vista24958[chr17:44848199-44848613]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 44848214 44850144 POLR2A UCSC Txn Factor no Conserved 108266026
chr17 44848214 44850144 POLR2A UCSC Txn Factor no Conserved 108266027
chr17 44848214 44850144 POLR2A UCSC Txn Factor no Conserved 108266028
chr17 44848485 44849234 PHF8 UCSC Txn Factor no Conserved 108266050
chr17 44848485 44849234 PHF8 UCSC Txn Factor no Conserved 108266051
chr17 44848189 44848199 MAX JASPAR yes 21246875
chr17 44848189 44848199 MAX JASPAR yes 54498646
chr17 44848200 44848210 MAX JASPAR yes 21246876
chr17 44848200 44848210 MAX JASPAR yes 54498647
chr17 44848205 44848215 NFATC3 JASPAR yes 21246877
chr17 44848205 44848215 NFATC3 JASPAR yes 54498648
chr17 44848216 44848227 BATF JASPAR yes 21246878
chr17 44848216 44848227 BATF JASPAR yes 54498649
chr17 44848221 44848225 YY1 TRANSFAC yes 21246879
chr17 44848221 44848225 YY1 TRANSFAC yes 54498650
chr17 44848228 44848243 FOXA1 JASPAR yes 21246880
chr17 44848228 44848243 FOXA1 JASPAR yes 54498651
chr17 44848254 44848274 ESR1 JASPAR yes 21246881
chr17 44848254 44848274 ESR1 JASPAR yes 54498652
chr17 44848326 44848338 PKNOX2 JASPAR yes 21246882
chr17 44848326 44848338 PKNOX2 JASPAR yes 54498653
chr17 44848329 44848334 USF2 TRANSFAC yes 21246883
chr17 44848329 44848334 USF2 TRANSFAC yes 54498654
chr17 44848376 44848387 CDX2 JASPAR yes 21246884
chr17 44848376 44848387 CDX2 JASPAR yes 54498655
chr17 44848377 44848381 ESR1 TRANSFAC yes 21246885
chr17 44848377 44848381 ESR1 TRANSFAC yes 54498656
chr17 44848377 44848388 HOXC11 JASPAR yes 21246886
chr17 44848377 44848388 HOXD12 JASPAR yes 21246887
chr17 44848377 44848388 HOXC11 JASPAR yes 54498657
chr17 44848377 44848388 HOXD12 JASPAR yes 54498658
chr17 44848378 44848387 CDX1 JASPAR yes 21246888
chr17 44848378 44848387 CDX1 JASPAR yes 54498659
chr17 44848378 44848388 HOXC10 JASPAR yes 21246889
chr17 44848378 44848388 HOXC10 JASPAR yes 54498660
chr17 44848387 44848401 RORA JASPAR yes 21246890
chr17 44848387 44848401 RORA JASPAR yes 54498661
chr17 44848393 44848404 PROP1 JASPAR yes 21246891
chr17 44848393 44848404 PROP1 JASPAR yes 54498662
chr17 44848398 44848402 YY1 TRANSFAC yes 21246892
chr17 44848398 44848402 YY1 TRANSFAC yes 54498663
chr17 44848422 44848428 SP1 TRANSFAC yes 21246893
chr17 44848422 44848428 SP1 TRANSFAC yes 54498664
chr17 44848437 44848451 MTF1 JASPAR yes 21246894
chr17 44848437 44848451 MTF1 JASPAR yes 54498665
chr17 44848454 44848459 ETS2 TRANSFAC yes 21246895
chr17 44848454 44848459 ETS2 TRANSFAC yes 54498666
chr17 44848468 44848482 PLAG1 JASPAR yes 21246896
chr17 44848468 44848482 PLAG1 JASPAR yes 54498667
chr17 44848476 44848487 E2F4 JASPAR yes 21246897
chr17 44848476 44848487 E2F4 JASPAR yes 54498668
chr17 44848478 44848493 ZBTB33 JASPAR yes 21246898
chr17 44848478 44848493 ZBTB33 JASPAR yes 54498669
chr17 44848486 44848507 REST JASPAR yes 21246899
chr17 44848486 44848507 REST JASPAR yes 54498670
chr17 44848504 44848519 ZIC3 JASPAR yes 21246900
chr17 44848504 44848519 ZIC3 JASPAR yes 54498671
chr17 44848505 44848510 SP1 TRANSFAC yes 21246901
chr17 44848505 44848510 SP1 TRANSFAC yes 54498672
chr17 44848513 44848532 CTCF JASPAR yes 21246902
chr17 44848513 44848532 CTCF JASPAR yes 54498673
chr17 44848529 44848534 SP1 TRANSFAC yes 21246903
chr17 44848529 44848534 SP1 TRANSFAC yes 54498674
chr17 44848529 44848547 ESR1 JASPAR yes 21246904
chr17 44848529 44848547 ESR1 JASPAR yes 54498675
chr17 44848547 44848561 ZIC1 JASPAR yes 21246905
chr17 44848547 44848561 ZIC1 JASPAR yes 54498676
chr17 44848553 44848559 MAZ TRANSFAC yes 21246906
chr17 44848553 44848559 MAZ TRANSFAC yes 54498677
chr17 44848559 44848573 MTF1 JASPAR yes 21246907
chr17 44848559 44848573 MTF1 JASPAR yes 54498678
chr17 44848576 44848580 H4TF2 TRANSFAC yes 21246908
chr17 44848576 44848580 H4TF2 TRANSFAC yes 54498679
chr17 44848580 44848585 SP1 TRANSFAC yes 21246909
chr17 44848580 44848585 SP1 TRANSFAC yes 54498680
chr17 44848580 44848591 NRF1 JASPAR yes 21246910
chr17 44848580 44848591 NRF1 JASPAR yes 54498681
chr17 44848592 44848603 NRF1 JASPAR yes 21246911
chr17 44848592 44848603 NRF1 JASPAR yes 54498682
SNP sites on vista24958[chr17:44848199-44848613]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 44848240 rs140532481 A G
FOXA1 POLR2A
4901122
chr17 44848310 rs191231033 G A
POLR2A
4901123
chr17 44848314 rs3809857 G T
POLR2A
4901124
chr17 44848430 rs115060764 T G
POLR2A
4901125
chr17 44848438 rs199524 G T
MTF1 POLR2A
4901126
chr17 44848461 rs377121492 GC G
POLR2A
4901127
chr17 44848461 rs546481402 GC G
POLR2A
4901128
chr17 44848509 rs373634057 C A
PHF8 POLR2A SP1 ZIC3
4901129
chr17 44848517 rs199523 C A
CTCF PHF8 POLR2A ZIC3
4901130
chr17 44848593 rs558395766 C G
NRF1 PHF8 POLR2A
4901131
Genes possibly regulated by vista24958[chr17:44848199-44848613]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 44839872 44910520 - WNT3 ENSG00000108379.5 44910520 0.9 1.0 15962 38093
chr17 44910567 44964096 + WNT9B ENSG00000158955.6 44910567 0.97 0.95 15963 38046
Expression level of Genes
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miRNAs possibly regulated by vista24958[chr17:44848199-44848613]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results