EnhancerDB
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  3. vista24967[chr17:45277552-45277907]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24967[chr17:45277552-45277907]
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Tissue distribution of vista24967
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Transcription factor that possibly regulate vista24967[chr17:45277552-45277907]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 45277438 45277729 SPI1 UCSC Txn Factor no Conserved 108266556
chr17 45277552 45277569 BCL6B JASPAR yes 21247316
chr17 45277552 45277569 BCL6B JASPAR yes 54515526
chr17 45277555 45277568 ELF1 JASPAR yes 21247317
chr17 45277555 45277568 ELF1 JASPAR yes 54515527
chr17 45277558 45277565 SPIB JASPAR yes 21247318
chr17 45277558 45277565 SPIB JASPAR yes 54515528
chr17 45277558 45277569 FLI1 JASPAR yes 21247319
chr17 45277558 45277569 FLI1 JASPAR yes 54515529
chr17 45277559 45277567 EHF JASPAR yes 21247320
chr17 45277559 45277567 EHF JASPAR yes 54515530
chr17 45277560 45277567 SPI1 JASPAR yes 21247321
chr17 45277560 45277567 SPI1 JASPAR yes 54515531
chr17 45277569 45277583 SPI1 JASPAR yes 21247322
chr17 45277569 45277583 SPI1 JASPAR yes 54515532
chr17 45277571 45277592 IRF1 JASPAR yes 21247323
chr17 45277571 45277592 IRF1 JASPAR yes 54515533
chr17 45277575 45277590 PRDM1 JASPAR yes 21247324
chr17 45277575 45277590 PRDM1 JASPAR yes 54515534
chr17 45277577 45277598 IRF1 JASPAR yes 21247325
chr17 45277577 45277598 IRF1 JASPAR yes 54515535
chr17 45277581 45277595 SPI1 JASPAR yes 21247326
chr17 45277581 45277595 SPIC JASPAR yes 21247327
chr17 45277581 45277595 SPI1 JASPAR yes 54515536
chr17 45277581 45277595 SPIC JASPAR yes 54515537
chr17 45277582 45277595 ELF1 JASPAR yes 21247328
chr17 45277582 45277595 ELF1 JASPAR yes 54515538
chr17 45277583 45277595 EHF JASPAR yes 21247329
chr17 45277583 45277595 ELF1 JASPAR yes 21247330
chr17 45277583 45277595 ELF4 JASPAR yes 21247331
chr17 45277583 45277595 EHF JASPAR yes 54515539
chr17 45277583 45277595 ELF1 JASPAR yes 54515540
chr17 45277583 45277595 ELF4 JASPAR yes 54515541
chr17 45277584 45277595 ELF5 JASPAR yes 21247332
chr17 45277584 45277595 ELF5 JASPAR yes 54515542
chr17 45277585 45277592 SPIB JASPAR yes 21247333
chr17 45277585 45277592 SPIB JASPAR yes 54515543
chr17 45277585 45277596 FLI1 JASPAR yes 21247334
chr17 45277585 45277596 FLI1 JASPAR yes 54515544
chr17 45277585 45277606 ZNF263 JASPAR yes 21247335
chr17 45277585 45277606 ZNF263 JASPAR yes 54515545
chr17 45277586 45277594 EHF JASPAR yes 21247336
chr17 45277586 45277594 EHF JASPAR yes 54515546
chr17 45277587 45277594 SPI1 JASPAR yes 21247337
chr17 45277587 45277594 SPI1 JASPAR yes 54515547
chr17 45277594 45277615 IRF1 JASPAR yes 21247338
chr17 45277594 45277615 IRF1 JASPAR yes 54515548
chr17 45277597 45277611 IRF7 JASPAR yes 21247339
chr17 45277597 45277611 IRF7 JASPAR yes 54515549
chr17 45277598 45277612 STAT1 JASPAR yes 21247340
chr17 45277598 45277612 STAT1 JASPAR yes 54515550
chr17 45277598 45277613 PRDM1 JASPAR yes 21247341
chr17 45277598 45277613 STAT2 JASPAR yes 21247342
chr17 45277598 45277613 PRDM1 JASPAR yes 54515551
chr17 45277598 45277613 STAT2 JASPAR yes 54515552
chr17 45277598 45277616 IRF2 JASPAR yes 21247343
chr17 45277598 45277616 IRF2 JASPAR yes 54515553
chr17 45277600 45277621 IRF1 JASPAR yes 21247344
chr17 45277600 45277621 IRF1 JASPAR yes 54515554
chr17 45277626 45277638 POU3F1 JASPAR yes 21247345
chr17 45277626 45277638 POU3F2 JASPAR yes 21247346
chr17 45277626 45277638 POU3F1 JASPAR yes 54515555
chr17 45277626 45277638 POU3F2 JASPAR yes 54515556
chr17 45277631 45277647 POU4F3 JASPAR yes 21247347
chr17 45277631 45277647 POU4F3 JASPAR yes 54515557
chr17 45277632 45277642 HOXA13 JASPAR yes 21247348
chr17 45277632 45277642 HOXA13 JASPAR yes 54515558
chr17 45277633 45277637 YY1 TRANSFAC yes 21247349
chr17 45277633 45277637 YY1 TRANSFAC yes 54515559
chr17 45277633 45277647 POU4F1 JASPAR yes 21247350
chr17 45277633 45277647 POU4F1 JASPAR yes 54515560
chr17 45277634 45277646 MEF2A JASPAR yes 21247351
chr17 45277634 45277646 MEF2A JASPAR yes 54515561
chr17 45277635 45277645 MEF2A JASPAR yes 21247352
chr17 45277635 45277645 MEF2A JASPAR yes 54515562
chr17 45277644 45277649 GATA2 JASPAR yes 21247353
chr17 45277644 45277649 GATA2 JASPAR yes 54515563
chr17 45277646 45277652 MZF1 JASPAR yes 21247354
chr17 45277646 45277652 MZF1 JASPAR yes 54515564
chr17 45277648 45277666 MAFF JASPAR yes 21247355
chr17 45277648 45277666 MAFF JASPAR yes 54515565
chr17 45277649 45277653 H1TF2 TRANSFAC yes 21247356
chr17 45277649 45277653 NFE TRANSFAC yes 21247357
chr17 45277649 45277653 SRF TRANSFAC yes 21247358
chr17 45277649 45277653 H1TF2 TRANSFAC yes 54515566
chr17 45277649 45277653 NFE TRANSFAC yes 54515567
chr17 45277649 45277653 SRF TRANSFAC yes 54515568
chr17 45277650 45277661 NRL JASPAR yes 21247359
chr17 45277650 45277661 NRL JASPAR yes 54515569
chr17 45277650 45277665 MAFK JASPAR yes 21247360
chr17 45277650 45277665 MAFK JASPAR yes 54515570
chr17 45277650 45277671 MAFG JASPAR yes 21247361
chr17 45277650 45277671 MAFG JASPAR yes 54515571
chr17 45277653 45277664 STAT3 JASPAR yes 21247362
chr17 45277653 45277664 STAT3 JASPAR yes 54515572
chr17 45277674 45277692 MAFF JASPAR yes 21247363
chr17 45277674 45277692 MAFF JASPAR yes 54515573
chr17 45277676 45277687 NRL JASPAR yes 21247364
chr17 45277676 45277687 NRL JASPAR yes 54515574
chr17 45277676 45277691 MAFK JASPAR yes 21247365
chr17 45277676 45277691 MAFK JASPAR yes 54515575
chr17 45277737 45277756 PAX5 JASPAR yes 21247366
chr17 45277737 45277756 PAX5 JASPAR yes 54515576
chr17 45277744 45277749 ETS2 TRANSFAC yes 21247367
chr17 45277744 45277749 ETS2 TRANSFAC yes 54515577
chr17 45277752 45277763 EBF1 JASPAR yes 21247368
chr17 45277752 45277763 EBF1 JASPAR yes 54515578
chr17 45277752 45277765 TFAP2A JASPAR yes 21247369
chr17 45277752 45277765 TFAP2B JASPAR yes 21247370
chr17 45277752 45277765 TFAP2C JASPAR yes 21247371
chr17 45277752 45277765 TFAP2A JASPAR yes 54515579
chr17 45277752 45277765 TFAP2B JASPAR yes 54515580
chr17 45277752 45277765 TFAP2C JASPAR yes 54515581
chr17 45277812 45277828 RFX2 JASPAR yes 21247372
chr17 45277812 45277828 RFX3 JASPAR yes 21247373
chr17 45277812 45277828 RFX4 JASPAR yes 21247374
chr17 45277812 45277828 RFX5 JASPAR yes 21247375
chr17 45277812 45277828 RFX2 JASPAR yes 54515582
chr17 45277812 45277828 RFX3 JASPAR yes 54515583
chr17 45277812 45277828 RFX4 JASPAR yes 54515584
chr17 45277812 45277828 RFX5 JASPAR yes 54515585
chr17 45277828 45277840 TEAD1 JASPAR yes 21247376
chr17 45277828 45277840 TEAD1 JASPAR yes 54515586
chr17 45277847 45277851 ESR1 TRANSFAC yes 21247377
chr17 45277847 45277851 ESR1 TRANSFAC yes 54515587
chr17 45277852 45277855 MYB TRANSFAC yes 21247378
chr17 45277852 45277855 MYB TRANSFAC yes 54515588
chr17 45277862 45277867 ATF1 TRANSFAC yes 21247379
chr17 45277862 45277867 ATF1 TRANSFAC yes 54515589
chr17 45277869 45277873 LFA1 TRANSFAC yes 21247380
chr17 45277869 45277873 LFA1 TRANSFAC yes 54515590
chr17 45277879 45277900 ZNF263 JASPAR yes 21247381
chr17 45277879 45277900 ZNF263 JASPAR yes 54515591
chr17 45277892 45277906 NR2F1 JASPAR yes 21247382
chr17 45277892 45277906 NR2F1 JASPAR yes 54515592
SNP sites on vista24967[chr17:45277552-45277907]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 45277596 rs547561065 A G
FLI1 IRF1 SPI1 ZNF263
4903248
chr17 45277671 rs58260762 A G
MAFG SPI1
4903249
chr17 45277767 rs61255112 A G no 4903250
chr17 45277776 rs59764111 G A no 4903251
chr17 45277797 rs536077778 T C no 4903252
chr17 45277807 rs140840840 T C no 4903253
chr17 45277812 rs57661742 T C
RFX2 RFX3 RFX4 RFX5
4903254
Genes possibly regulated by vista24967[chr17:45277552-45277907]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 45195069 45266788 - CDC27 ENSG00000004897.7 45266788 0.71 0.99 15967 89236
chr17 45277812 45301045 + MYL4 ENSG00000198336.5 45277812 0.99 1.0 15968 0
chr17 45331212 45421658 + ITGB3 ENSG00000259207.3 45331212 0.89 0.97 15969 46695
chr17 45331263 45421658 + ITGB3 ENSG00000259753.1 45331263 0.99 1.0 15970 46644
Expression level of Genes
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miRNAs possibly regulated by vista24967[chr17:45277552-45277907]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results