EnhancerDB
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  3. vista24980[chr17:45725037-45725352]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24980[chr17:45725037-45725352]
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Tissue distribution of vista24980
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Transcription factor that possibly regulate vista24980[chr17:45725037-45725352]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 45725037 45725045 MGA JASPAR yes 21247909
chr17 45725060 45725064 YY1 TRANSFAC yes 21247910
chr17 45725078 45725084 TCF4 TRANSFAC yes 21247911
chr17 45725106 45725110 YY1 TRANSFAC yes 21247912
chr17 45725106 45725127 IRF1 JASPAR yes 21247913
chr17 45725109 45725122 ELF1 JASPAR yes 21247914
chr17 45725109 45725123 SPI1 JASPAR yes 21247915
chr17 45725109 45725123 SPIC JASPAR yes 21247916
chr17 45725112 45725119 SPIB JASPAR yes 21247917
chr17 45725121 45725124 MYB TRANSFAC yes 21247918
chr17 45725123 45725129 SOX10 JASPAR yes 21247919
chr17 45725135 45725139 H1TF2 TRANSFAC yes 21247920
chr17 45725135 45725139 NFE TRANSFAC yes 21247921
chr17 45725135 45725139 SRF TRANSFAC yes 21247922
chr17 45725151 45725157 SOX10 JASPAR yes 21247923
chr17 45725156 45725168 TGIF2 JASPAR yes 21247924
chr17 45725168 45725174 SOX10 JASPAR yes 21247925
chr17 45725177 45725188 ELF5 JASPAR yes 21247926
chr17 45725177 45725190 ELF1 JASPAR yes 21247927
chr17 45725178 45725185 SPI1 JASPAR yes 21247928
chr17 45725178 45725186 EHF JASPAR yes 21247929
chr17 45725213 45725217 LFA1 TRANSFAC yes 21247930
chr17 45725214 45725224 EN2 JASPAR yes 21247931
chr17 45725214 45725224 GBX1 JASPAR yes 21247932
chr17 45725214 45725224 GBX2 JASPAR yes 21247933
chr17 45725214 45725224 HOXA2 JASPAR yes 21247934
chr17 45725215 45725223 DLX6 JASPAR yes 21247935
chr17 45725215 45725223 MSX1 JASPAR yes 21247936
chr17 45725217 45725232 JUND JASPAR yes 21247937
chr17 45725218 45725231 JUN JASPAR yes 21247938
chr17 45725219 45725226 JUN TRANSFAC yes 21247939
chr17 45725235 45725246 USF1 JASPAR yes 21247940
chr17 45725270 45725280 ALX3 JASPAR yes 21247941
chr17 45725270 45725280 EN2 JASPAR yes 21247942
chr17 45725270 45725280 ESX1 JASPAR yes 21247943
chr17 45725271 45725275 H1TF2 TRANSFAC yes 21247944
chr17 45725271 45725275 NFE TRANSFAC yes 21247945
chr17 45725271 45725275 SRF TRANSFAC yes 21247946
chr17 45725271 45725279 BSX JASPAR yes 21247947
chr17 45725271 45725279 DLX6 JASPAR yes 21247948
chr17 45725271 45725279 MSX1 JASPAR yes 21247949
chr17 45725271 45725279 MSX2 JASPAR yes 21247950
chr17 45725275 45725285 MZF1 JASPAR yes 21247951
chr17 45725287 45725291 YY1 TRANSFAC yes 21247952
chr17 45725291 45725312 IRF1 JASPAR yes 21247953
chr17 45725293 45725308 IRF9 JASPAR yes 21247954
chr17 45725294 45725308 IRF7 JASPAR yes 21247955
chr17 45725294 45725308 IRF8 JASPAR yes 21247956
chr17 45725295 45725309 STAT1 JASPAR yes 21247957
chr17 45725295 45725310 STAT2 JASPAR yes 21247958
chr17 45725295 45725313 IRF2 JASPAR yes 21247959
chr17 45725296 45725308 IRF1 JASPAR yes 21247960
chr17 45725301 45725310 SRY JASPAR yes 21247961
chr17 45725320 45725326 LEF1 TRANSFAC yes 21247962
chr17 45725320 45725326 SOX10 JASPAR yes 21247963
chr17 45725324 45725345 IRF1 JASPAR yes 21247964
chr17 45725327 45725337 BARHL2 JASPAR yes 21247965
chr17 45725329 45725333 YY1 TRANSFAC yes 21247966
chr17 45725330 45725351 IRF1 JASPAR yes 21247967
chr17 45725332 45725347 PRDM1 JASPAR yes 21247968
chr17 45725333 45725337 YY1 TRANSFAC yes 21247969
SNP sites on vista24980[chr17:45725037-45725352]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 45725107 rs549838047 C T
IRF1 YY1
4905135
chr17 45725196 rs538903540 C T no 4905136
Genes possibly regulated by vista24980[chr17:45725037-45725352]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 45726842 45762871 + KPNB1 ENSG00000108424.5 45726842 0.73 0.99 15973 98510
chr17 45771447 45789416 + TBKBP1 ENSG00000198933.5 45771447 0.73 1.0 15974 53905
chr17 45810610 45823485 + TBX21 ENSG00000073861.2 45810610 0.94 1.0 15975 14742
Expression level of Genes
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miRNAs possibly regulated by vista24980[chr17:45725037-45725352]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results