EnhancerDB
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  3. vista24996[chr17:45980057-45980402]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24996[chr17:45980057-45980402]
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Tissue distribution of vista24996
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Transcription factor that possibly regulate vista24996[chr17:45980057-45980402]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 45980057 45980078 ZNF263 JASPAR yes 21248784
chr17 45980057 45980078 ZNF263 JASPAR yes 54547110
chr17 45980068 45980076 OTX2 JASPAR yes 21248785
chr17 45980068 45980076 OTX2 JASPAR yes 54547111
chr17 45980068 45980077 PITX3 JASPAR yes 21248786
chr17 45980068 45980077 PITX3 JASPAR yes 54547112
chr17 45980093 45980105 INSM1 JASPAR yes 21248787
chr17 45980093 45980105 INSM1 JASPAR yes 54547113
chr17 45980105 45980125 RREB1 JASPAR yes 21248788
chr17 45980105 45980125 RREB1 JASPAR yes 54547114
chr17 45980105 45980126 IRF1 JASPAR yes 21248789
chr17 45980105 45980126 IRF1 JASPAR yes 54547115
chr17 45980110 45980124 IRF7 JASPAR yes 21248790
chr17 45980110 45980124 IRF7 JASPAR yes 54547116
chr17 45980110 45980130 RREB1 JASPAR yes 21248791
chr17 45980110 45980130 RREB1 JASPAR yes 54547117
chr17 45980111 45980132 IRF1 JASPAR yes 21248792
chr17 45980111 45980132 IRF1 JASPAR yes 54547118
chr17 45980112 45980118 TCF4 TRANSFAC yes 21248793
chr17 45980112 45980118 TCF4 TRANSFAC yes 54547119
chr17 45980112 45980127 FOXP1 JASPAR yes 21248794
chr17 45980112 45980127 FOXP1 JASPAR yes 54547120
chr17 45980115 45980127 IRF1 JASPAR yes 21248795
chr17 45980115 45980127 IRF1 JASPAR yes 54547121
chr17 45980115 45980135 RREB1 JASPAR yes 21248796
chr17 45980115 45980135 RREB1 JASPAR yes 54547122
chr17 45980116 45980137 IRF1 JASPAR yes 21248797
chr17 45980116 45980137 IRF1 JASPAR yes 54547123
chr17 45980117 45980123 TCF4 TRANSFAC yes 21248798
chr17 45980117 45980123 TCF4 TRANSFAC yes 54547124
chr17 45980117 45980132 FOXP1 JASPAR yes 21248799
chr17 45980117 45980132 FOXP1 JASPAR yes 54547125
chr17 45980120 45980132 IRF1 JASPAR yes 21248800
chr17 45980120 45980132 IRF1 JASPAR yes 54547126
chr17 45980122 45980128 TCF4 TRANSFAC yes 21248801
chr17 45980122 45980128 TCF4 TRANSFAC yes 54547127
chr17 45980122 45980137 FOXP1 JASPAR yes 21248802
chr17 45980122 45980137 FOXP1 JASPAR yes 54547128
chr17 45980123 45980138 STAT2 JASPAR yes 21248803
chr17 45980123 45980138 STAT2 JASPAR yes 54547129
chr17 45980125 45980137 IRF1 JASPAR yes 21248804
chr17 45980125 45980137 IRF1 JASPAR yes 54547130
chr17 45980127 45980133 TCF4 TRANSFAC yes 21248805
chr17 45980127 45980133 TCF4 TRANSFAC yes 54547131
chr17 45980127 45980142 FOXP1 JASPAR yes 21248806
chr17 45980127 45980142 FOXP1 JASPAR yes 54547132
chr17 45980154 45980162 MEIS3 JASPAR yes 21248807
chr17 45980154 45980162 MEIS3 JASPAR yes 54547133
chr17 45980155 45980159 NFE TRANSFAC yes 21248808
chr17 45980155 45980159 NFE TRANSFAC yes 54547134
chr17 45980188 45980202 TLX1 JASPAR yes 21248809
chr17 45980188 45980202 TLX1 JASPAR yes 54547135
chr17 45980188 45980206 ESR2 JASPAR yes 21248810
chr17 45980188 45980206 ESR2 JASPAR yes 54547136
chr17 45980189 45980206 ESR1 JASPAR yes 21248811
chr17 45980189 45980206 ESR1 JASPAR yes 54547137
chr17 45980192 45980213 ZNF263 JASPAR yes 21248812
chr17 45980192 45980213 ZNF263 JASPAR yes 54547138
chr17 45980224 45980245 ZNF263 JASPAR yes 21248813
chr17 45980224 45980245 ZNF263 JASPAR yes 54547139
chr17 45980230 45980238 EHF JASPAR yes 21248814
chr17 45980230 45980238 EHF JASPAR yes 54547140
chr17 45980262 45980267 SP1 TRANSFAC yes 21248815
chr17 45980262 45980267 SP1 TRANSFAC yes 54547141
chr17 45980263 45980268 SP1 TRANSFAC yes 21248816
chr17 45980263 45980268 SP1 TRANSFAC yes 54547142
chr17 45980263 45980272 HIC2 JASPAR yes 21248817
chr17 45980263 45980272 HIC2 JASPAR yes 54547143
chr17 45980266 45980270 LFA1 TRANSFAC yes 21248818
chr17 45980266 45980270 LFA1 TRANSFAC yes 54547144
chr17 45980273 45980283 SP1 JASPAR yes 21248819
chr17 45980273 45980283 SP1 JASPAR yes 54547145
chr17 45980273 45980292 PAX5 JASPAR yes 21248820
chr17 45980273 45980292 PAX5 JASPAR yes 54547146
chr17 45980276 45980281 SP1 TRANSFAC yes 21248821
chr17 45980276 45980281 SP1 TRANSFAC yes 54547147
chr17 45980290 45980305 MEF2A JASPAR yes 21248822
chr17 45980290 45980305 MEF2A JASPAR yes 54547148
chr17 45980291 45980306 MEF2C JASPAR yes 21248823
chr17 45980291 45980306 MEF2C JASPAR yes 54547149
chr17 45980292 45980304 MEF2A JASPAR yes 21248824
chr17 45980292 45980304 MEF2B JASPAR yes 21248825
chr17 45980292 45980304 MEF2D JASPAR yes 21248826
chr17 45980292 45980304 MEF2A JASPAR yes 54547150
chr17 45980292 45980304 MEF2B JASPAR yes 54547151
chr17 45980292 45980304 MEF2D JASPAR yes 54547152
chr17 45980294 45980298 YY1 TRANSFAC yes 21248827
chr17 45980294 45980298 YY1 TRANSFAC yes 54547153
chr17 45980312 45980324 HLF JASPAR yes 21248828
chr17 45980312 45980324 HLF JASPAR yes 54547154
chr17 45980314 45980325 YY2 JASPAR yes 21248829
chr17 45980314 45980325 YY2 JASPAR yes 54547155
chr17 45980315 45980327 YY1 JASPAR yes 21248830
chr17 45980315 45980327 YY1 JASPAR yes 54547156
chr17 45980341 45980356 NR2C2 JASPAR yes 21248831
chr17 45980341 45980356 NR2C2 JASPAR yes 54547157
chr17 45980344 45980357 NR2F1 JASPAR yes 21248832
chr17 45980344 45980357 NR2F1 JASPAR yes 54547158
chr17 45980348 45980356 CREB1 JASPAR yes 21248833
chr17 45980348 45980356 CREB1 JASPAR yes 54547159
chr17 45980352 45980362 SREBF2 JASPAR yes 21248834
chr17 45980352 45980362 SREBF2 JASPAR yes 54547160
chr17 45980352 45980363 USF1 JASPAR yes 21248835
chr17 45980352 45980363 USF2 JASPAR yes 21248836
chr17 45980352 45980363 USF1 JASPAR yes 54547161
chr17 45980352 45980363 USF2 JASPAR yes 54547162
chr17 45980355 45980368 NFKB1 JASPAR yes 21248837
chr17 45980355 45980368 NFKB1 JASPAR yes 54547163
chr17 45980360 45980366 ZNF354C JASPAR yes 21248838
chr17 45980360 45980366 ZNF354C JASPAR yes 54547164
chr17 45980361 45980371 ID4 JASPAR yes 21248839
chr17 45980361 45980371 ID4 JASPAR yes 54547165
chr17 45980362 45980371 SNAI2 JASPAR yes 21248840
chr17 45980362 45980371 SNAI2 JASPAR yes 54547166
chr17 45980363 45980368 USF2 TRANSFAC yes 21248841
chr17 45980363 45980368 USF2 TRANSFAC yes 54547167
chr17 45980375 45980380 SP1 TRANSFAC yes 21248842
chr17 45980375 45980380 SP1 TRANSFAC yes 54547168
SNP sites on vista24996[chr17:45980057-45980402]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 45980105 rs538684782 A G
INSM1 IRF1 RREB1
4906692
chr17 45980260 rs188219038 T C no 4906693
chr17 45980401 rs193172303 C T no 4906694
Genes possibly regulated by vista24996[chr17:45980057-45980402]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 45884738 45899200 - OSBPL7 ENSG00000006025.7 45899200 0.7 1.0 15976 19143
chr17 45900638 45908900 - MRPL10 ENSG00000159111.8 45908900 0.56 1.0 15977 28843
chr17 45908993 45915079 + LRRC46 ENSG00000141294.5 45908993 0.87 1.0 15978 28936
chr17 45915058 45918699 - SCRN2 ENSG00000141295.9 45918699 0.71 1.0 15979 38642
chr17 45922279 45933240 - SP6 ENSG00000189120.3 45933240 0.85 1.0 15980 53183
chr17 45973516 46006323 + SP2 ENSG00000167182.11 45973516 0.62 1.0 15981 93459
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 61530
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 45158
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 35226
Expression level of Genes
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miRNAs possibly regulated by vista24996[chr17:45980057-45980402]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results