EnhancerDB
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  3. vista25001[chr17:46073519-46073818]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25001[chr17:46073519-46073818]
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Tissue distribution of vista25001
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Transcription factor that possibly regulate vista25001[chr17:46073519-46073818]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46073612 46074022 GATA2 UCSC Txn Factor no Conserved 108267645
chr17 46073532 46073546 EBF1 JASPAR yes 21249020
chr17 46073532 46073546 EBF1 JASPAR yes 54550491
chr17 46073533 46073548 TFAP2C JASPAR yes 21249021
chr17 46073533 46073548 TFAP2C JASPAR yes 54550492
chr17 46073534 46073545 EBF1 JASPAR yes 21249022
chr17 46073534 46073545 EBF1 JASPAR yes 54550493
chr17 46073538 46073543 TFAP2A TRANSFAC yes 21249023
chr17 46073538 46073543 TFAP2A TRANSFAC yes 54550494
chr17 46073538 46073544 MZF1 JASPAR yes 21249024
chr17 46073538 46073544 MZF1 JASPAR yes 54550495
chr17 46073562 46073583 REST JASPAR yes 21249025
chr17 46073562 46073583 REST JASPAR yes 54550496
chr17 46073563 46073573 SP1 JASPAR yes 21249026
chr17 46073563 46073573 SP1 JASPAR yes 54550497
chr17 46073563 46073582 REST JASPAR yes 21249027
chr17 46073563 46073582 REST JASPAR yes 54550498
chr17 46073570 46073580 ID4 JASPAR yes 21249028
chr17 46073570 46073580 TCF3 JASPAR yes 21249029
chr17 46073570 46073580 TCF4 JASPAR yes 21249030
chr17 46073570 46073580 ID4 JASPAR yes 54550499
chr17 46073570 46073580 TCF3 JASPAR yes 54550500
chr17 46073570 46073580 TCF4 JASPAR yes 54550501
chr17 46073582 46073590 HOXA5 JASPAR yes 21249031
chr17 46073582 46073590 HOXA5 JASPAR yes 54550502
chr17 46073630 46073641 E2F4 JASPAR yes 21249032
chr17 46073630 46073641 E2F6 JASPAR yes 21249033
chr17 46073630 46073641 E2F4 JASPAR yes 54550503
chr17 46073630 46073641 E2F6 JASPAR yes 54550504
chr17 46073631 46073642 E2F1 JASPAR yes 21249034
chr17 46073631 46073642 E2F1 JASPAR yes 54550505
chr17 46073652 46073667 HNF4A JASPAR yes 21249035
chr17 46073652 46073667 HNF4A JASPAR yes 54550506
chr17 46073653 46073667 NR2F1 JASPAR yes 21249036
chr17 46073653 46073667 RXRB JASPAR yes 21249037
chr17 46073653 46073667 RXRG JASPAR yes 21249038
chr17 46073653 46073667 NR2F1 JASPAR yes 54550507
chr17 46073653 46073667 RXRB JASPAR yes 54550508
chr17 46073653 46073667 RXRG JASPAR yes 54550509
chr17 46073653 46073668 HNF4G JASPAR yes 21249039
chr17 46073653 46073668 NR2C2 JASPAR yes 21249040
chr17 46073653 46073668 HNF4G JASPAR yes 54550510
chr17 46073653 46073668 NR2C2 JASPAR yes 54550511
chr17 46073659 46073674 HNF4A JASPAR yes 21249041
chr17 46073659 46073674 HNF4A JASPAR yes 54550512
chr17 46073660 46073674 RXRB JASPAR yes 21249042
chr17 46073660 46073674 RXRG JASPAR yes 21249043
chr17 46073660 46073674 RXRB JASPAR yes 54550513
chr17 46073660 46073674 RXRG JASPAR yes 54550514
chr17 46073660 46073675 HNF4G JASPAR yes 21249044
chr17 46073660 46073675 NR2C2 JASPAR yes 21249045
chr17 46073660 46073675 HNF4G JASPAR yes 54550515
chr17 46073660 46073675 NR2C2 JASPAR yes 54550516
chr17 46073664 46073683 CTCF JASPAR yes 21249046
chr17 46073664 46073683 CTCF JASPAR yes 54550517
chr17 46073678 46073690 MYBL1 JASPAR yes 21249047
chr17 46073678 46073690 MYBL1 JASPAR yes 54550518
chr17 46073680 46073684 YY1 TRANSFAC yes 21249048
chr17 46073680 46073684 YY1 TRANSFAC yes 54550519
chr17 46073683 46073686 MYB TRANSFAC yes 21249049
chr17 46073683 46073686 MYB TRANSFAC yes 54550520
chr17 46073686 46073705 CTCF JASPAR yes 21249050
chr17 46073686 46073705 CTCF JASPAR yes 54550521
chr17 46073687 46073695 MEIS3 JASPAR yes 21249051
chr17 46073687 46073695 MEIS3 JASPAR yes 54550522
chr17 46073688 46073692 NFE TRANSFAC yes 21249052
chr17 46073688 46073692 NFE TRANSFAC yes 54550523
chr17 46073689 46073700 USF2 JASPAR yes 21249053
chr17 46073689 46073700 USF2 JASPAR yes 54550524
chr17 46073689 46073701 PKNOX1 JASPAR yes 21249054
chr17 46073689 46073701 TGIF2 JASPAR yes 21249055
chr17 46073689 46073701 PKNOX1 JASPAR yes 54550525
chr17 46073689 46073701 TGIF2 JASPAR yes 54550526
chr17 46073690 46073697 USF2 TRANSFAC yes 21249056
chr17 46073690 46073697 USF2 TRANSFAC yes 54550527
chr17 46073692 46073697 USF2 TRANSFAC yes 21249057
chr17 46073692 46073697 USF2 TRANSFAC yes 54550528
chr17 46073705 46073720 TFAP2C JASPAR yes 21249058
chr17 46073705 46073720 TFAP2C JASPAR yes 54550529
chr17 46073721 46073738 PAX1 JASPAR yes 21249059
chr17 46073721 46073738 PAX9 JASPAR yes 21249060
chr17 46073721 46073738 PAX1 JASPAR yes 54550530
chr17 46073721 46073738 PAX9 JASPAR yes 54550531
chr17 46073723 46073727 NFE TRANSFAC yes 21249061
chr17 46073723 46073727 NFE TRANSFAC yes 54550532
chr17 46073731 46073749 SRF JASPAR yes 21249062
chr17 46073731 46073749 SRF JASPAR yes 54550533
chr17 46073738 46073750 YY1 JASPAR yes 21249063
chr17 46073738 46073750 YY1 JASPAR yes 54550534
chr17 46073749 46073756 SP1 TRANSFAC yes 21249064
chr17 46073749 46073756 SP1 TRANSFAC yes 54550535
chr17 46073751 46073756 SP1 TRANSFAC yes 21249065
chr17 46073751 46073756 SP1 TRANSFAC yes 54550536
chr17 46073759 46073764 ETS2 TRANSFAC yes 21249066
chr17 46073759 46073764 ETS2 TRANSFAC yes 54550537
chr17 46073774 46073786 INSM1 JASPAR yes 21249067
chr17 46073774 46073786 INSM1 JASPAR yes 54550538
chr17 46073781 46073789 NKX6-1 JASPAR yes 21249068
chr17 46073781 46073789 NKX6-2 JASPAR yes 21249069
chr17 46073781 46073789 NKX6-1 JASPAR yes 54550539
chr17 46073781 46073789 NKX6-2 JASPAR yes 54550540
chr17 46073781 46073791 POU6F2 JASPAR yes 21249070
chr17 46073781 46073791 POU6F2 JASPAR yes 54550541
chr17 46073789 46073803 E2F7 JASPAR yes 21249071
chr17 46073789 46073803 E2F7 JASPAR yes 54550542
chr17 46073793 46073798 SP1 TRANSFAC yes 21249072
chr17 46073793 46073798 SP1 TRANSFAC yes 54550543
chr17 46073793 46073799 SP1 TRANSFAC yes 21249073
chr17 46073793 46073799 SP1 TRANSFAC yes 54550544
chr17 46073796 46073806 SP1 JASPAR yes 21249074
chr17 46073796 46073806 SP1 JASPAR yes 54550545
chr17 46073798 46073804 MAZ TRANSFAC yes 21249075
chr17 46073798 46073804 MAZ TRANSFAC yes 54550546
chr17 46073812 46073816 NFE TRANSFAC yes 21249076
chr17 46073812 46073816 NFE TRANSFAC yes 54550547
chr17 46073818 46073839 REST JASPAR yes 21249077
chr17 46073818 46073839 REST JASPAR yes 54550548
SNP sites on vista25001[chr17:46073519-46073818]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46073626 rs184615444 G C
GATA2
4907212
chr17 46073645 rs149637911 T C
GATA2
4907213
chr17 46073748 rs567833446 TG T
GATA2 SRF YY1
4907214
Genes possibly regulated by vista25001[chr17:46073519-46073818]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 45353
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 61725
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 71657
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 58426
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 48127
Expression level of Genes
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miRNAs possibly regulated by vista25001[chr17:46073519-46073818]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results