EnhancerDB
  1. Home
  2. Enhancers
  3. vista25002[chr17:46078613-46078939]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25002[chr17:46078613-46078939]
Back to top
Tissue distribution of vista25002
Back to top
Transcription factor that possibly regulate vista25002[chr17:46078613-46078939]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46078634 46078639 TFAP2A TRANSFAC yes 21249078
chr17 46078634 46078639 TFAP2A TRANSFAC yes 54551377
chr17 46078634 46078640 MZF1 JASPAR yes 21249079
chr17 46078634 46078640 MZF1 JASPAR yes 54551378
chr17 46078634 46078644 SP1 JASPAR yes 21249080
chr17 46078634 46078644 SP1 JASPAR yes 54551379
chr17 46078636 46078642 MAZ TRANSFAC yes 21249081
chr17 46078636 46078642 MAZ TRANSFAC yes 54551380
chr17 46078673 46078686 NR2F1 JASPAR yes 21249082
chr17 46078673 46078686 NR2F1 JASPAR yes 54551381
chr17 46078685 46078699 ZIC1 JASPAR yes 21249083
chr17 46078685 46078699 ZIC1 JASPAR yes 54551382
chr17 46078701 46078720 CTCF JASPAR yes 21249084
chr17 46078701 46078720 CTCF JASPAR yes 54551383
chr17 46078702 46078714 ZBTB7C JASPAR yes 21249085
chr17 46078702 46078714 ZBTB7C JASPAR yes 54551384
chr17 46078708 46078718 TFAP4 JASPAR yes 21249086
chr17 46078708 46078718 TFAP4 JASPAR yes 54551385
chr17 46078725 46078740 HNF4G JASPAR yes 21249087
chr17 46078725 46078740 HNF4G JASPAR yes 54551386
chr17 46078729 46078735 SOX10 JASPAR yes 21249088
chr17 46078729 46078735 SOX10 JASPAR yes 54551387
chr17 46078733 46078754 IRF1 JASPAR yes 21249089
chr17 46078733 46078754 IRF1 JASPAR yes 54551388
chr17 46078735 46078750 STAT2 JASPAR yes 21249090
chr17 46078735 46078750 STAT2 JASPAR yes 54551389
chr17 46078736 46078750 SPIC JASPAR yes 21249091
chr17 46078736 46078750 STAT1 JASPAR yes 21249092
chr17 46078736 46078750 SPIC JASPAR yes 54551390
chr17 46078736 46078750 STAT1 JASPAR yes 54551391
chr17 46078737 46078751 IRF7 JASPAR yes 21249093
chr17 46078737 46078751 IRF8 JASPAR yes 21249094
chr17 46078737 46078751 IRF7 JASPAR yes 54551392
chr17 46078737 46078751 IRF8 JASPAR yes 54551393
chr17 46078737 46078752 IRF9 JASPAR yes 21249095
chr17 46078737 46078752 IRF9 JASPAR yes 54551394
chr17 46078756 46078761 H4TF1 TRANSFAC yes 21249096
chr17 46078756 46078761 H4TF1 TRANSFAC yes 54551395
chr17 46078756 46078770 SPIC JASPAR yes 21249097
chr17 46078756 46078770 SPIC JASPAR yes 54551396
chr17 46078757 46078765 FEV JASPAR yes 21249098
chr17 46078757 46078765 FEV JASPAR yes 54551397
chr17 46078757 46078770 JUN JASPAR yes 21249099
chr17 46078757 46078770 JUN JASPAR yes 54551398
chr17 46078763 46078778 PRDM1 JASPAR yes 21249100
chr17 46078763 46078778 PRDM1 JASPAR yes 54551399
chr17 46078764 46078768 YY1 TRANSFAC yes 21249101
chr17 46078764 46078768 YY1 TRANSFAC yes 54551400
chr17 46078772 46078787 FOXA1 JASPAR yes 21249102
chr17 46078772 46078787 FOXA1 JASPAR yes 54551401
chr17 46078783 46078794 NFKB1 JASPAR yes 21249103
chr17 46078783 46078794 NFKB1 JASPAR yes 54551402
chr17 46078784 46078794 REL JASPAR yes 21249104
chr17 46078784 46078794 REL JASPAR yes 54551403
chr17 46078786 46078801 LEF1 JASPAR yes 21249105
chr17 46078786 46078801 LEF1 JASPAR yes 54551404
chr17 46078787 46078802 RUNX2 JASPAR yes 21249106
chr17 46078787 46078802 RUNX2 JASPAR yes 54551405
chr17 46078788 46078803 MEF2C JASPAR yes 21249107
chr17 46078788 46078803 MEF2C JASPAR yes 54551406
chr17 46078788 46078809 IRF1 JASPAR yes 21249108
chr17 46078788 46078809 IRF1 JASPAR yes 54551407
chr17 46078791 46078806 FOXP1 JASPAR yes 21249109
chr17 46078791 46078806 FOXP1 JASPAR yes 54551408
chr17 46078792 46078807 FOXP1 JASPAR yes 21249110
chr17 46078792 46078807 FOXP1 JASPAR yes 54551409
chr17 46078792 46078813 IRF1 JASPAR yes 21249111
chr17 46078792 46078813 IRF1 JASPAR yes 54551410
chr17 46078793 46078808 FOXP1 JASPAR yes 21249112
chr17 46078793 46078808 FOXP1 JASPAR yes 54551411
chr17 46078793 46078814 IRF1 JASPAR yes 21249113
chr17 46078793 46078814 IRF1 JASPAR yes 54551412
chr17 46078794 46078809 FOXP1 JASPAR yes 21249114
chr17 46078794 46078809 FOXP1 JASPAR yes 54551413
chr17 46078794 46078815 IRF1 JASPAR yes 21249115
chr17 46078794 46078815 IRF1 JASPAR yes 54551414
chr17 46078795 46078810 FOXP1 JASPAR yes 21249116
chr17 46078795 46078810 FOXP1 JASPAR yes 54551415
chr17 46078795 46078816 IRF1 JASPAR yes 21249117
chr17 46078795 46078816 IRF1 JASPAR yes 54551416
chr17 46078796 46078811 FOXP1 JASPAR yes 21249118
chr17 46078796 46078811 FOXP1 JASPAR yes 54551417
chr17 46078796 46078817 IRF1 JASPAR yes 21249119
chr17 46078796 46078817 IRF1 JASPAR yes 54551418
chr17 46078797 46078812 FOXP1 JASPAR yes 21249120
chr17 46078797 46078812 FOXP1 JASPAR yes 54551419
chr17 46078797 46078818 IRF1 JASPAR yes 21249121
chr17 46078797 46078818 IRF1 JASPAR yes 54551420
chr17 46078798 46078813 FOXP1 JASPAR yes 21249122
chr17 46078798 46078813 FOXP1 JASPAR yes 54551421
chr17 46078798 46078819 IRF1 JASPAR yes 21249123
chr17 46078798 46078819 IRF1 JASPAR yes 54551422
chr17 46078799 46078814 FOXP1 JASPAR yes 21249124
chr17 46078799 46078814 FOXP1 JASPAR yes 54551423
chr17 46078799 46078820 IRF1 JASPAR yes 21249125
chr17 46078799 46078820 IRF1 JASPAR yes 54551424
chr17 46078800 46078815 FOXP1 JASPAR yes 21249126
chr17 46078800 46078815 FOXP1 JASPAR yes 54551425
chr17 46078802 46078817 FOXP1 JASPAR yes 21249127
chr17 46078802 46078817 FOXP1 JASPAR yes 54551426
chr17 46078831 46078834 MYB TRANSFAC yes 21249128
chr17 46078831 46078834 MYB TRANSFAC yes 54551427
chr17 46078849 46078853 YY1 TRANSFAC yes 21249129
chr17 46078849 46078853 YY1 TRANSFAC yes 54551428
chr17 46078862 46078876 POU1F1 JASPAR yes 21249130
chr17 46078862 46078876 POU1F1 JASPAR yes 54551429
chr17 46078863 46078875 POU3F1 JASPAR yes 21249131
chr17 46078863 46078875 POU3F2 JASPAR yes 21249132
chr17 46078863 46078875 POU3F1 JASPAR yes 54551430
chr17 46078863 46078875 POU3F2 JASPAR yes 54551431
chr17 46078863 46078876 POU3F3 JASPAR yes 21249133
chr17 46078863 46078876 POU3F3 JASPAR yes 54551432
chr17 46078864 46078876 POU2F1 JASPAR yes 21249134
chr17 46078864 46078876 POU2F1 JASPAR yes 54551433
chr17 46078865 46078874 POU3F4 JASPAR yes 21249135
chr17 46078865 46078874 POU5F1B JASPAR yes 21249136
chr17 46078865 46078874 POU3F4 JASPAR yes 54551434
chr17 46078865 46078874 POU5F1B JASPAR yes 54551435
chr17 46078867 46078883 POU4F2 JASPAR yes 21249137
chr17 46078867 46078883 POU4F2 JASPAR yes 54551436
chr17 46078875 46078878 MYB TRANSFAC yes 21249138
chr17 46078875 46078878 MYB TRANSFAC yes 54551437
chr17 46078879 46078893 PAX6 JASPAR yes 21249139
chr17 46078879 46078893 PAX6 JASPAR yes 54551438
chr17 46078888 46078893 H4TF1 TRANSFAC yes 21249140
chr17 46078888 46078893 H4TF1 TRANSFAC yes 54551439
chr17 46078915 46078928 HSF1 JASPAR yes 21249141
chr17 46078915 46078928 HSF1 JASPAR yes 54551440
chr17 46078917 46078931 NR2F1 JASPAR yes 21249142
chr17 46078917 46078931 NR2F1 JASPAR yes 54551441
chr17 46078929 46078933 YY1 TRANSFAC yes 21249143
chr17 46078929 46078933 YY1 TRANSFAC yes 54551442
chr17 46078929 46078940 CEBPB JASPAR yes 21249144
chr17 46078929 46078940 CEBPB JASPAR yes 54551443
chr17 46078939 46078950 HOXA10 JASPAR yes 21249145
chr17 46078939 46078950 HOXA10 JASPAR yes 54551444
SNP sites on vista25002[chr17:46078613-46078939]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46078662 rs2525101 A T no 4907294
chr17 46078793 rs561053043 CA C
FOXP1 IRF1 LEF1 MEF2C NFKB1 REL RUNX2
4907295
chr17 46078793 rs5820676 CA C
FOXP1 IRF1 LEF1 MEF2C NFKB1 REL RUNX2
4907296
chr17 46078793 rs761754910 CA C
FOXP1 IRF1 LEF1 MEF2C NFKB1 REL RUNX2
4907297
chr17 46078825 rs180703179 C T no 4907298
Genes possibly regulated by vista25002[chr17:46078613-46078939]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 40259
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 56631
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 66563
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 63547
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 53248
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 56
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25002[chr17:46078613-46078939]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results