EnhancerDB
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  3. vista25004[chr17:46080436-46080890]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25004[chr17:46080436-46080890]
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Tissue distribution of vista25004
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Transcription factor that possibly regulate vista25004[chr17:46080436-46080890]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46080340 46080563 GATA2 UCSC Txn Factor no Conserved 108267722
chr17 46080438 46080655 EP300 UCSC Txn Factor no Conserved 108267725
chr17 46080436 46080440 NFE TRANSFAC yes 21249213
chr17 46080436 46080440 NFE TRANSFAC yes 54551672
chr17 46080436 46080441 GATA1 TRANSFAC yes 21249214
chr17 46080436 46080441 GATA1 TRANSFAC yes 54551673
chr17 46080436 46080442 GATA3 JASPAR yes 21249215
chr17 46080436 46080442 GATA3 JASPAR yes 54551674
chr17 46080468 46080472 NFE TRANSFAC yes 21249216
chr17 46080468 46080472 NFE TRANSFAC yes 54551675
chr17 46080474 46080478 YY1 TRANSFAC yes 21249217
chr17 46080474 46080478 YY1 TRANSFAC yes 54551676
chr17 46080485 46080495 ZNF740 JASPAR yes 21249218
chr17 46080485 46080495 ZNF740 JASPAR yes 54551677
chr17 46080487 46080508 ZNF263 JASPAR yes 21249219
chr17 46080487 46080508 ZNF263 JASPAR yes 54551678
chr17 46080489 46080510 ZNF263 JASPAR yes 21249220
chr17 46080489 46080510 ZNF263 JASPAR yes 54551679
chr17 46080492 46080501 THAP1 JASPAR yes 21249221
chr17 46080492 46080501 THAP1 JASPAR yes 54551680
chr17 46080492 46080507 NR2C2 JASPAR yes 21249222
chr17 46080492 46080507 NR2C2 JASPAR yes 54551681
chr17 46080493 46080514 ZNF263 JASPAR yes 21249223
chr17 46080493 46080514 ZNF263 JASPAR yes 54551682
chr17 46080494 46080515 ZNF263 JASPAR yes 21249224
chr17 46080494 46080515 ZNF263 JASPAR yes 54551683
chr17 46080495 46080499 LFA1 TRANSFAC yes 21249225
chr17 46080495 46080499 LFA1 TRANSFAC yes 54551684
chr17 46080495 46080507 INSM1 JASPAR yes 21249226
chr17 46080495 46080507 INSM1 JASPAR yes 54551685
chr17 46080500 46080521 ZNF263 JASPAR yes 21249227
chr17 46080500 46080521 ZNF263 JASPAR yes 54551686
chr17 46080573 46080588 STAT1 JASPAR yes 21249228
chr17 46080573 46080588 STAT1 JASPAR yes 54551687
chr17 46080580 46080592 INSM1 JASPAR yes 21249229
chr17 46080580 46080592 INSM1 JASPAR yes 54551688
chr17 46080582 46080592 MZF1 JASPAR yes 21249230
chr17 46080582 46080592 MZF1 JASPAR yes 54551689
chr17 46080585 46080594 SP1 TRANSFAC yes 21249231
chr17 46080585 46080594 SP1 TRANSFAC yes 54551690
chr17 46080585 46080595 SP1 JASPAR yes 21249232
chr17 46080585 46080595 SP1 JASPAR yes 54551691
chr17 46080586 46080596 SP1 JASPAR yes 21249233
chr17 46080586 46080596 SP1 JASPAR yes 54551692
chr17 46080587 46080593 MAZ TRANSFAC yes 21249234
chr17 46080587 46080593 MAZ TRANSFAC yes 54551693
chr17 46080587 46080597 SP1 JASPAR yes 21249235
chr17 46080587 46080597 SP1 JASPAR yes 54551694
chr17 46080594 46080598 LFA1 TRANSFAC yes 21249236
chr17 46080594 46080598 LFA1 TRANSFAC yes 54551695
chr17 46080601 46080614 SMAD2 JASPAR yes 21249237
chr17 46080601 46080614 SMAD2 JASPAR yes 54551696
chr17 46080622 46080631 NFIX JASPAR yes 21249238
chr17 46080622 46080631 NFIX JASPAR yes 54551697
chr17 46080622 46080632 NFIA JASPAR yes 21249239
chr17 46080622 46080632 NFIA JASPAR yes 54551698
chr17 46080624 46080630 NFIC JASPAR yes 21249240
chr17 46080624 46080630 NFIC JASPAR yes 54551699
chr17 46080646 46080650 H4TF2 TRANSFAC yes 21249241
chr17 46080646 46080650 H4TF2 TRANSFAC yes 54551700
chr17 46080665 46080668 MYB TRANSFAC yes 21249242
chr17 46080665 46080668 MYB TRANSFAC yes 54551701
chr17 46080710 46080727 BCL6B JASPAR yes 21249243
chr17 46080710 46080727 BCL6B JASPAR yes 54551702
chr17 46080740 46080745 SP1 TRANSFAC yes 21249244
chr17 46080740 46080745 SP1 TRANSFAC yes 54551703
chr17 46080741 46080755 CREB3L1 JASPAR yes 21249245
chr17 46080741 46080755 CREB3L1 JASPAR yes 54551704
chr17 46080761 46080765 ESR1 TRANSFAC yes 21249246
chr17 46080761 46080765 ESR1 TRANSFAC yes 54551705
chr17 46080768 46080788 RREB1 JASPAR yes 21249247
chr17 46080768 46080788 RREB1 JASPAR yes 54551706
chr17 46080772 46080792 RREB1 JASPAR yes 21249248
chr17 46080772 46080792 RREB1 JASPAR yes 54551707
chr17 46080773 46080785 ZBTB7B JASPAR yes 21249249
chr17 46080773 46080785 ZBTB7B JASPAR yes 54551708
chr17 46080776 46080781 SP1 TRANSFAC yes 21249250
chr17 46080776 46080781 SP1 TRANSFAC yes 54551709
chr17 46080778 46080798 RREB1 JASPAR yes 21249251
chr17 46080778 46080798 RREB1 JASPAR yes 54551710
chr17 46080779 46080800 ZNF263 JASPAR yes 21249252
chr17 46080779 46080800 ZNF263 JASPAR yes 54551711
chr17 46080782 46080802 RREB1 JASPAR yes 21249253
chr17 46080782 46080802 RREB1 JASPAR yes 54551712
chr17 46080783 46080804 ZNF263 JASPAR yes 21249254
chr17 46080783 46080804 ZNF263 JASPAR yes 54551713
chr17 46080786 46080791 SP1 TRANSFAC yes 21249255
chr17 46080786 46080791 SP1 TRANSFAC yes 54551714
chr17 46080788 46080793 TFAP2A TRANSFAC yes 21249256
chr17 46080788 46080793 TFAP2A TRANSFAC yes 54551715
chr17 46080788 46080794 MZF1 JASPAR yes 21249257
chr17 46080788 46080794 MZF1 JASPAR yes 54551716
chr17 46080788 46080809 ZNF263 JASPAR yes 21249258
chr17 46080788 46080809 ZNF263 JASPAR yes 54551717
chr17 46080797 46080802 TFAP2A TRANSFAC yes 21249259
chr17 46080797 46080802 TFAP2A TRANSFAC yes 54551718
chr17 46080797 46080803 MZF1 JASPAR yes 21249260
chr17 46080797 46080803 MZF1 JASPAR yes 54551719
chr17 46080800 46080821 ZNF263 JASPAR yes 21249261
chr17 46080800 46080821 ZNF263 JASPAR yes 54551720
chr17 46080803 46080824 ZNF263 JASPAR yes 21249262
chr17 46080803 46080824 ZNF263 JASPAR yes 54551721
chr17 46080804 46080815 NRF1 JASPAR yes 21249263
chr17 46080804 46080815 NRF1 JASPAR yes 54551722
chr17 46080814 46080824 SP1 JASPAR yes 21249264
chr17 46080814 46080824 SP1 JASPAR yes 54551723
chr17 46080817 46080822 SP1 TRANSFAC yes 21249265
chr17 46080817 46080822 SP1 TRANSFAC yes 54551724
chr17 46080864 46080869 ETS2 TRANSFAC yes 21249266
chr17 46080864 46080869 ETS2 TRANSFAC yes 54551725
chr17 46080871 46080888 ESR1 JASPAR yes 21249267
chr17 46080871 46080888 ESR1 JASPAR yes 54551726
chr17 46080880 46080886 NFIC JASPAR yes 21249268
chr17 46080880 46080886 NFIC JASPAR yes 54551727
SNP sites on vista25004[chr17:46080436-46080890]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46080586 rs886445 G C,T
EP300 INSM1 MZF1 SP1 STAT1
4907318
chr17 46080622 rs368368953 C T
EP300 NFIA NFIX
4907319
chr17 46080806 rs2525102 A G
NRF1 ZNF263
4907320
Genes possibly regulated by vista25004[chr17:46080436-46080890]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 38436
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 54808
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 64740
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 65498
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 55199
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 2007
chr17 46180719 46200436 + SNX11 ENSG00000002919.10 46180719 0.63 1.0 15988 171
Expression level of Genes
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miRNAs possibly regulated by vista25004[chr17:46080436-46080890]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results