EnhancerDB
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  3. vista25009[chr17:46101351-46101579]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25009[chr17:46101351-46101579]
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Tissue distribution of vista25009
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Transcription factor that possibly regulate vista25009[chr17:46101351-46101579]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46100703 46103103 POLR2A UCSC Txn Factor no Conserved 108267791
chr17 46100703 46103103 POLR2A UCSC Txn Factor no Conserved 108267792
chr17 46100755 46101592 CTCF UCSC Txn Factor no Conserved 108267795
chr17 46101338 46101352 SPIC JASPAR yes 21249471
chr17 46101338 46101352 SPIC JASPAR yes 54554610
chr17 46101353 46101359 PEA3 TRANSFAC yes 21249472
chr17 46101353 46101359 PEA3 TRANSFAC yes 54554611
chr17 46101353 46101364 FLI1 JASPAR yes 21249473
chr17 46101353 46101364 FLI1 JASPAR yes 54554612
chr17 46101365 46101377 INSM1 JASPAR yes 21249474
chr17 46101365 46101377 INSM1 JASPAR yes 54554613
chr17 46101372 46101376 LFA1 TRANSFAC yes 21249475
chr17 46101372 46101376 LFA1 TRANSFAC yes 54554614
chr17 46101383 46101394 E2F1 JASPAR yes 21249476
chr17 46101383 46101394 E2F1 JASPAR yes 54554615
chr17 46101384 46101389 SP1 TRANSFAC yes 21249477
chr17 46101384 46101389 SP1 TRANSFAC yes 54554616
chr17 46101432 46101442 MAX JASPAR yes 21249478
chr17 46101432 46101442 MAX JASPAR yes 54554617
chr17 46101433 46101443 HEY1 JASPAR yes 21249479
chr17 46101433 46101443 HEY2 JASPAR yes 21249480
chr17 46101433 46101443 MAX JASPAR yes 21249481
chr17 46101433 46101443 MNT JASPAR yes 21249482
chr17 46101433 46101443 HEY1 JASPAR yes 54554618
chr17 46101433 46101443 HEY2 JASPAR yes 54554619
chr17 46101433 46101443 MAX JASPAR yes 54554620
chr17 46101433 46101443 MNT JASPAR yes 54554621
chr17 46101434 46101441 USF1 JASPAR yes 21249483
chr17 46101434 46101441 USF1 JASPAR yes 54554622
chr17 46101435 46101440 MYC TRANSFAC yes 21249484
chr17 46101435 46101440 USF1 TRANSFAC yes 21249485
chr17 46101435 46101440 USF2 TRANSFAC yes 21249486
chr17 46101435 46101440 MYC TRANSFAC yes 54554623
chr17 46101435 46101440 USF1 TRANSFAC yes 54554624
chr17 46101435 46101440 USF2 TRANSFAC yes 54554625
chr17 46101435 46101442 USF1 JASPAR yes 21249487
chr17 46101435 46101442 USF1 JASPAR yes 54554626
chr17 46101449 46101453 LFA1 TRANSFAC yes 21249488
chr17 46101449 46101453 LFA1 TRANSFAC yes 54554627
chr17 46101463 46101472 SP1 TRANSFAC yes 21249489
chr17 46101463 46101472 SP1 TRANSFAC yes 54554628
chr17 46101464 46101479 NR2C2 JASPAR yes 21249490
chr17 46101464 46101479 NR2C2 JASPAR yes 54554629
chr17 46101472 46101486 GLIS2 JASPAR yes 21249491
chr17 46101472 46101486 GLIS2 JASPAR yes 54554630
chr17 46101476 46101490 ZIC1 JASPAR yes 21249492
chr17 46101476 46101490 ZIC1 JASPAR yes 54554631
chr17 46101487 46101495 SP1 TRANSFAC yes 21249493
chr17 46101487 46101495 SP1 TRANSFAC yes 54554632
chr17 46101495 46101509 GLIS3 JASPAR yes 21249494
chr17 46101495 46101509 GLIS3 JASPAR yes 54554633
chr17 46101502 46101508 ETS1 JASPAR yes 21249495
chr17 46101502 46101508 ETS1 JASPAR yes 54554634
chr17 46101527 46101531 H4TF2 TRANSFAC yes 21249496
chr17 46101527 46101531 H4TF2 TRANSFAC yes 54554635
chr17 46101534 46101546 INSM1 JASPAR yes 21249497
chr17 46101534 46101546 INSM1 JASPAR yes 54554636
chr17 46101540 46101544 LFA1 TRANSFAC yes 21249498
chr17 46101540 46101544 LFA1 TRANSFAC yes 54554637
chr17 46101549 46101557 EHF JASPAR yes 21249499
chr17 46101549 46101557 EHF JASPAR yes 54554638
chr17 46101551 46101556 ETS2 TRANSFAC yes 21249500
chr17 46101551 46101556 ETS2 TRANSFAC yes 54554639
chr17 46101559 46101578 REST JASPAR yes 21249501
chr17 46101559 46101578 REST JASPAR yes 54554640
chr17 46101570 46101574 H4TF2 TRANSFAC yes 21249502
chr17 46101570 46101574 H4TF2 TRANSFAC yes 54554641
SNP sites on vista25009[chr17:46101351-46101579]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46101460 rs112296021 G A
CTCF POLR2A
4907535
chr17 46101478 rs144304508 C A,G
CTCF GLIS2 NR2C2 POLR2A ZIC1
4907536
chr17 46101532 rs185181352 C A
CTCF POLR2A
4907537
Genes possibly regulated by vista25009[chr17:46101351-46101579]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 17521
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 33893
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 43825
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 86187
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 75888
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 22696
chr17 46180719 46200436 + SNX11 ENSG00000002919.10 46180719 0.63 1.0 15988 20860
Expression level of Genes
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miRNAs possibly regulated by vista25009[chr17:46101351-46101579]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results