EnhancerDB
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  3. vista25010[chr17:46102426-46102830]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25010[chr17:46102426-46102830]
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Tissue distribution of vista25010
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Transcription factor that possibly regulate vista25010[chr17:46102426-46102830]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46100703 46103103 POLR2A UCSC Txn Factor no Conserved 108267791
chr17 46100703 46103103 POLR2A UCSC Txn Factor no Conserved 108267792
chr17 46102255 46102691 MXI1 UCSC Txn Factor no Conserved 108267903
chr17 46102282 46102666 USF1 UCSC Txn Factor no Conserved 108267909
chr17 46102325 46102655 BHLHE40 UCSC Txn Factor no Conserved 108267919
chr17 46102430 46102778 CTCF UCSC Txn Factor no Conserved 108267962
chr17 46102460 46102763 SMC3 UCSC Txn Factor no Conserved 108267978
chr17 46102474 46102745 RAD21 UCSC Txn Factor no Conserved 108267983
chr17 46102411 46102426 PRDM1 JASPAR yes 21249503
chr17 46102411 46102426 PRDM1 JASPAR yes 54554765
chr17 46102439 46102448 HIC2 JASPAR yes 21249504
chr17 46102439 46102448 HIC2 JASPAR yes 54554767
chr17 46102439 46102451 GLI2 JASPAR yes 21249505
chr17 46102439 46102451 GLI2 JASPAR yes 54554768
chr17 46102445 46102456 NRF1 JASPAR yes 21249506
chr17 46102445 46102456 NRF1 JASPAR yes 54554769
chr17 46102465 46102476 FOSL2 JASPAR yes 21249507
chr17 46102465 46102476 FOSL2 JASPAR yes 54554770
chr17 46102466 46102471 SP1 TRANSFAC yes 21249508
chr17 46102466 46102471 SP1 TRANSFAC yes 54554771
chr17 46102468 46102474 ESR1 TRANSFAC yes 21249509
chr17 46102468 46102474 ESR1 TRANSFAC yes 54554772
chr17 46102470 46102474 ESR1 TRANSFAC yes 21249510
chr17 46102470 46102474 ESR1 TRANSFAC yes 54554773
chr17 46102479 46102498 RFX2 JASPAR yes 21249511
chr17 46102479 46102498 RFX2 JASPAR yes 54554774
chr17 46102481 46102496 RFX5 JASPAR yes 21249512
chr17 46102481 46102496 RFX5 JASPAR yes 54554775
chr17 46102483 46102499 RFX2 JASPAR yes 21249513
chr17 46102483 46102499 RFX3 JASPAR yes 21249514
chr17 46102483 46102499 RFX4 JASPAR yes 21249515
chr17 46102483 46102499 RFX5 JASPAR yes 21249516
chr17 46102483 46102499 RFX2 JASPAR yes 54554776
chr17 46102483 46102499 RFX3 JASPAR yes 54554777
chr17 46102483 46102499 RFX4 JASPAR yes 54554778
chr17 46102483 46102499 RFX5 JASPAR yes 54554779
chr17 46102484 46102503 RFX2 JASPAR yes 21249517
chr17 46102484 46102503 RFX2 JASPAR yes 54554780
chr17 46102491 46102495 LFA1 TRANSFAC yes 21249518
chr17 46102491 46102495 LFA1 TRANSFAC yes 54554781
chr17 46102501 46102505 NFE TRANSFAC yes 21249519
chr17 46102501 46102505 NFE TRANSFAC yes 54554782
chr17 46102514 46102520 ETS1 JASPAR yes 21249520
chr17 46102514 46102520 ETS1 JASPAR yes 54554783
chr17 46102528 46102531 MYB TRANSFAC yes 21249521
chr17 46102528 46102531 MYB TRANSFAC yes 54554784
chr17 46102550 46102554 H4TF2 TRANSFAC yes 21249522
chr17 46102550 46102554 H4TF2 TRANSFAC yes 54554785
chr17 46102553 46102558 SP1 TRANSFAC yes 21249523
chr17 46102553 46102558 SP1 TRANSFAC yes 54554786
chr17 46102554 46102567 TFAP2A JASPAR yes 21249524
chr17 46102554 46102567 TFAP2B JASPAR yes 21249525
chr17 46102554 46102567 TFAP2C JASPAR yes 21249526
chr17 46102554 46102567 TFAP2A JASPAR yes 54554787
chr17 46102554 46102567 TFAP2B JASPAR yes 54554788
chr17 46102554 46102567 TFAP2C JASPAR yes 54554789
chr17 46102554 46102569 TFAP2C JASPAR yes 21249527
chr17 46102554 46102569 TFAP2C JASPAR yes 54554790
chr17 46102555 46102564 TFAP2A JASPAR yes 21249528
chr17 46102555 46102564 TFAP2A JASPAR yes 54554791
chr17 46102555 46102566 EBF1 JASPAR yes 21249529
chr17 46102555 46102566 EBF1 JASPAR yes 54554792
chr17 46102560 46102567 SP1 TRANSFAC yes 21249530
chr17 46102560 46102567 SP1 TRANSFAC yes 54554793
chr17 46102560 46102570 SP1 JASPAR yes 21249531
chr17 46102560 46102570 SP1 JASPAR yes 54554794
chr17 46102562 46102567 SP1 TRANSFAC yes 21249532
chr17 46102562 46102567 SP1 TRANSFAC yes 54554795
chr17 46102573 46102584 NRL JASPAR yes 21249533
chr17 46102573 46102584 NRL JASPAR yes 54554796
chr17 46102584 46102588 H4TF2 TRANSFAC yes 21249534
chr17 46102584 46102588 H4TF2 TRANSFAC yes 54554797
chr17 46102588 46102599 E2F4 JASPAR yes 21249535
chr17 46102588 46102599 E2F4 JASPAR yes 54554798
chr17 46102589 46102594 SP1 TRANSFAC yes 21249536
chr17 46102589 46102594 SP1 TRANSFAC yes 54554799
chr17 46102598 46102609 FLI1 JASPAR yes 21249537
chr17 46102598 46102609 FLI1 JASPAR yes 54554800
chr17 46102610 46102614 H4TF2 TRANSFAC yes 21249538
chr17 46102610 46102614 H4TF2 TRANSFAC yes 54554801
chr17 46102611 46102630 CTCF JASPAR yes 21249539
chr17 46102611 46102630 CTCF JASPAR yes 54554802
chr17 46102612 46102627 ZIC3 JASPAR yes 21249540
chr17 46102612 46102627 ZIC4 JASPAR yes 21249541
chr17 46102612 46102627 ZIC3 JASPAR yes 54554803
chr17 46102612 46102627 ZIC4 JASPAR yes 54554804
chr17 46102613 46102627 ZIC1 JASPAR yes 21249542
chr17 46102613 46102627 ZIC1 JASPAR yes 54554805
chr17 46102616 46102625 SNAI2 JASPAR yes 21249543
chr17 46102616 46102625 SNAI2 JASPAR yes 54554806
chr17 46102650 46102660 SP1 JASPAR yes 21249544
chr17 46102650 46102660 SP1 JASPAR yes 54554807
chr17 46102651 46102659 SP1 TRANSFAC yes 21249545
chr17 46102651 46102659 SP1 TRANSFAC yes 54554808
chr17 46102651 46102660 SP1 TRANSFAC yes 21249546
chr17 46102651 46102660 SP1 TRANSFAC yes 54554809
chr17 46102652 46102657 SP1 TRANSFAC yes 21249547
chr17 46102652 46102657 SP1 TRANSFAC yes 54554810
chr17 46102653 46102658 SP1 TRANSFAC yes 21249548
chr17 46102653 46102658 SP1 TRANSFAC yes 54554811
chr17 46102653 46102659 SP1 TRANSFAC yes 21249549
chr17 46102653 46102659 SP1 TRANSFAC yes 54554812
chr17 46102656 46102666 NFKB1 JASPAR yes 21249550
chr17 46102656 46102666 RELA JASPAR yes 21249551
chr17 46102656 46102666 REL JASPAR yes 21249552
chr17 46102656 46102666 NFKB1 JASPAR yes 54554813
chr17 46102656 46102666 RELA JASPAR yes 54554814
chr17 46102656 46102666 REL JASPAR yes 54554815
chr17 46102656 46102667 NFKB1 JASPAR yes 21249553
chr17 46102656 46102667 NFKB1 JASPAR yes 54554816
chr17 46102666 46102676 SP1 JASPAR yes 21249554
chr17 46102666 46102676 SP1 JASPAR yes 54554817
chr17 46102667 46102675 SP1 TRANSFAC yes 21249555
chr17 46102667 46102675 SP1 TRANSFAC yes 54554818
chr17 46102667 46102676 SP1 TRANSFAC yes 21249556
chr17 46102667 46102676 SP1 TRANSFAC yes 54554819
chr17 46102668 46102673 SP1 TRANSFAC yes 21249557
chr17 46102668 46102673 SP1 TRANSFAC yes 54554820
chr17 46102669 46102674 SP1 TRANSFAC yes 21249558
chr17 46102669 46102674 SP1 TRANSFAC yes 54554821
chr17 46102669 46102675 SP1 TRANSFAC yes 21249559
chr17 46102669 46102675 SP1 TRANSFAC yes 54554822
chr17 46102671 46102682 NFKB1 JASPAR yes 21249560
chr17 46102671 46102682 NFKB1 JASPAR yes 54554823
chr17 46102672 46102682 NFKB1 JASPAR yes 21249561
chr17 46102672 46102682 RELA JASPAR yes 21249562
chr17 46102672 46102682 NFKB1 JASPAR yes 54554824
chr17 46102672 46102682 RELA JASPAR yes 54554825
chr17 46102672 46102683 NFKB1 JASPAR yes 21249563
chr17 46102672 46102683 NFKB1 JASPAR yes 54554826
chr17 46102674 46102688 ZIC1 JASPAR yes 21249564
chr17 46102674 46102688 ZIC1 JASPAR yes 54554827
chr17 46102674 46102689 ZIC3 JASPAR yes 21249565
chr17 46102674 46102689 ZIC4 JASPAR yes 21249566
chr17 46102674 46102689 ZIC3 JASPAR yes 54554828
chr17 46102674 46102689 ZIC4 JASPAR yes 54554829
chr17 46102676 46102685 THAP1 JASPAR yes 21249567
chr17 46102676 46102685 THAP1 JASPAR yes 54554830
chr17 46102677 46102693 ZNF143 JASPAR yes 21249568
chr17 46102677 46102693 ZNF143 JASPAR yes 54554831
chr17 46102701 46102711 SP1 JASPAR yes 21249569
chr17 46102701 46102711 SP1 JASPAR yes 54554832
chr17 46102702 46102710 SP1 TRANSFAC yes 21249570
chr17 46102702 46102710 SP1 TRANSFAC yes 54554833
chr17 46102702 46102711 SP1 TRANSFAC yes 21249571
chr17 46102702 46102711 SP1 TRANSFAC yes 54554834
chr17 46102703 46102708 SP1 TRANSFAC yes 21249572
chr17 46102703 46102708 SP1 TRANSFAC yes 54554835
chr17 46102704 46102709 SP1 TRANSFAC yes 21249573
chr17 46102704 46102709 SP1 TRANSFAC yes 54554836
chr17 46102704 46102710 SP1 TRANSFAC yes 21249574
chr17 46102704 46102710 SP1 TRANSFAC yes 54554837
chr17 46102707 46102712 SP1 TRANSFAC yes 21249575
chr17 46102707 46102712 SP1 TRANSFAC yes 54554838
chr17 46102707 46102714 SP1 TRANSFAC yes 21249576
chr17 46102707 46102714 SP1 TRANSFAC yes 54554839
chr17 46102707 46102717 SP1 JASPAR yes 21249577
chr17 46102707 46102717 SP1 JASPAR yes 54554840
chr17 46102734 46102745 FOSL2 JASPAR yes 21249578
chr17 46102734 46102745 FOSL2 JASPAR yes 54554841
chr17 46102756 46102772 ZNF143 JASPAR yes 21249579
chr17 46102756 46102772 ZNF143 JASPAR yes 54554842
chr17 46102777 46102781 NFE TRANSFAC yes 21249580
chr17 46102777 46102781 NFE TRANSFAC yes 54554843
chr17 46102814 46102818 YY1 TRANSFAC yes 21249581
chr17 46102814 46102818 YY1 TRANSFAC yes 54554844
SNP sites on vista25010[chr17:46102426-46102830]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46102509 rs530514977 C T
BHLHE40 CTCF MXI1 POLR2A RAD21 SMC3 USF1
4907555
chr17 46102571 rs550309037 T G
BHLHE40 CTCF MXI1 POLR2A RAD21 SMC3 USF1
4907556
chr17 46102671 rs570665622 G C
CTCF MXI1 NFKB1 POLR2A RAD21 SMC3 SP1
4907557
chr17 46102692 rs533582650 A C,G
CTCF POLR2A RAD21 SMC3 ZNF143
4907558
chr17 46102693 rs546945131 G C
CTCF POLR2A RAD21 SMC3 ZNF143
4907559
chr17 46102699 rs34737931 T C
CTCF POLR2A RAD21 SMC3
4907560
chr17 46102728 rs79541578 G A
CTCF POLR2A RAD21 SMC3
4907561
chr17 46102814 rs373716829 G T
POLR2A YY1
4907562
Genes possibly regulated by vista25010[chr17:46102426-46102830]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46018872 46025654 + PNPO ENSG00000108439.5 46018872 0.82 0.99 15982 16446
chr17 46029333 46035244 - PRR15L ENSG00000167183.2 46035244 0.86 0.98 15983 32818
chr17 46045176 46059140 + CDK5RAP3 ENSG00000108465.10 46045176 0.76 1.0 15984 42750
chr17 46103533 46115392 - COPZ2 ENSG00000005243.5 46115392 0.68 0.88 15985 87438
chr17 46125691 46138849 + NFE2L1 ENSG00000082641.11 46125691 0.7 1.0 15986 77139
chr17 46147414 46178883 - CBX1 ENSG00000108468.10 46178883 0.73 0.99 15987 23947
chr17 46180719 46200436 + SNX11 ENSG00000002919.10 46180719 0.63 1.0 15988 22111
Expression level of Genes
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miRNAs possibly regulated by vista25010[chr17:46102426-46102830]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results