EnhancerDB
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  3. vista25026[chr17:46531085-46531211]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25026[chr17:46531085-46531211]
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Tissue distribution of vista25026
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Transcription factor that possibly regulate vista25026[chr17:46531085-46531211]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46531083 46531091 HOXA5 JASPAR yes 21250175
chr17 46531083 46531091 HOXA5 JASPAR yes 54583796
chr17 46531084 46531094 NOTO JASPAR yes 21250176
chr17 46531084 46531094 NOTO JASPAR yes 54583797
chr17 46531090 46531093 MYB TRANSFAC yes 21250177
chr17 46531090 46531093 MYB TRANSFAC yes 54583798
chr17 46531094 46531100 HiNF-A TRANSFAC yes 21250178
chr17 46531094 46531100 HiNF-A TRANSFAC yes 54583799
chr17 46531105 46531116 ESRRB JASPAR yes 21250179
chr17 46531105 46531116 ESRRB JASPAR yes 54583800
chr17 46531106 46531121 LEF1 JASPAR yes 21250180
chr17 46531106 46531121 LEF1 JASPAR yes 54583801
chr17 46531125 46531136 FLI1 JASPAR yes 21250181
chr17 46531125 46531136 FLI1 JASPAR yes 54583802
chr17 46531126 46531136 ERF JASPAR yes 21250182
chr17 46531126 46531136 ETV6 JASPAR yes 21250183
chr17 46531126 46531136 ERF JASPAR yes 54583803
chr17 46531126 46531136 ETV6 JASPAR yes 54583804
chr17 46531126 46531138 EHF JASPAR yes 21250184
chr17 46531126 46531138 EHF JASPAR yes 54583805
chr17 46531126 46531139 ELF1 JASPAR yes 21250185
chr17 46531126 46531139 ELF1 JASPAR yes 54583806
chr17 46531127 46531134 SPI1 JASPAR yes 21250186
chr17 46531127 46531134 SPI1 JASPAR yes 54583807
chr17 46531127 46531135 EHF JASPAR yes 21250187
chr17 46531127 46531135 FEV JASPAR yes 21250188
chr17 46531127 46531135 EHF JASPAR yes 54583808
chr17 46531127 46531135 FEV JASPAR yes 54583809
chr17 46531142 46531149 SPI1 JASPAR yes 21250189
chr17 46531142 46531149 SPI1 JASPAR yes 54583810
chr17 46531143 46531158 RUNX2 JASPAR yes 21250190
chr17 46531143 46531158 RUNX2 JASPAR yes 54583811
chr17 46531147 46531157 RUNX3 JASPAR yes 21250191
chr17 46531147 46531157 RUNX3 JASPAR yes 54583812
chr17 46531148 46531157 RUNX2 JASPAR yes 21250192
chr17 46531148 46531157 RUNX2 JASPAR yes 54583813
chr17 46531166 46531177 RUNX1 JASPAR yes 21250193
chr17 46531166 46531177 RUNX1 JASPAR yes 54583814
chr17 46531182 46531194 YY1 JASPAR yes 21250194
chr17 46531182 46531194 YY1 JASPAR yes 54583815
chr17 46531194 46531209 FOXP1 JASPAR yes 21250195
chr17 46531194 46531209 FOXP1 JASPAR yes 54583816
SNP sites on vista25026[chr17:46531085-46531211]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46531171 rs546272703 C T
RUNX1
4909610
chr17 46531175 rs55751709 G C
RUNX1
4909611
Genes possibly regulated by vista25026[chr17:46531085-46531211]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46210802 46507637 - SKAP1 ENSG00000141293.11 46507637 0.93 1.0 15989 76552
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 22852
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 7770
Expression level of Genes
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miRNAs possibly regulated by vista25026[chr17:46531085-46531211]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results