EnhancerDB
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  3. vista25027[chr17:46569094-46569227]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25027[chr17:46569094-46569227]
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Tissue distribution of vista25027
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Transcription factor that possibly regulate vista25027[chr17:46569094-46569227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46569077 46569098 REST JASPAR yes 21250196
chr17 46569077 46569098 REST JASPAR yes 54589443
chr17 46569090 46569108 NFYA JASPAR yes 21250197
chr17 46569090 46569108 NFYA JASPAR yes 54589444
chr17 46569101 46569116 MEF2A JASPAR yes 21250198
chr17 46569101 46569116 MEF2A JASPAR yes 54589445
chr17 46569102 46569117 MEF2C JASPAR yes 21250199
chr17 46569102 46569117 MEF2C JASPAR yes 54589446
chr17 46569103 46569115 MEF2A JASPAR yes 21250200
chr17 46569103 46569115 MEF2A JASPAR yes 54589447
chr17 46569105 46569109 YY1 TRANSFAC yes 21250201
chr17 46569105 46569109 YY1 TRANSFAC yes 54589448
chr17 46569107 46569118 HOXC12 JASPAR yes 21250202
chr17 46569107 46569118 HOXD12 JASPAR yes 21250203
chr17 46569107 46569118 HOXC12 JASPAR yes 54589449
chr17 46569107 46569118 HOXD12 JASPAR yes 54589450
chr17 46569114 46569126 FOXI1 JASPAR yes 21250204
chr17 46569114 46569126 FOXI1 JASPAR yes 54589451
chr17 46569115 46569126 FOXP2 JASPAR yes 21250205
chr17 46569115 46569126 FOXP2 JASPAR yes 54589452
chr17 46569115 46569129 FOXF2 JASPAR yes 21250206
chr17 46569115 46569129 FOXF2 JASPAR yes 54589453
chr17 46569116 46569124 FOXG1 JASPAR yes 21250207
chr17 46569116 46569124 FOXO3 JASPAR yes 21250208
chr17 46569116 46569124 FOXG1 JASPAR yes 54589454
chr17 46569116 46569124 FOXO3 JASPAR yes 54589455
chr17 46569117 46569127 HOXA13 JASPAR yes 21250209
chr17 46569117 46569127 HOXB13 JASPAR yes 21250210
chr17 46569117 46569127 HOXD13 JASPAR yes 21250211
chr17 46569117 46569127 HOXA13 JASPAR yes 54589456
chr17 46569117 46569127 HOXB13 JASPAR yes 54589457
chr17 46569117 46569127 HOXD13 JASPAR yes 54589458
chr17 46569117 46569128 FOXH1 JASPAR yes 21250212
chr17 46569117 46569128 FOXH1 JASPAR yes 54589459
chr17 46569125 46569129 ESR1 TRANSFAC yes 21250213
chr17 46569125 46569129 ESR1 TRANSFAC yes 54589460
chr17 46569132 46569147 HSF1 JASPAR yes 21250214
chr17 46569132 46569147 HSF1 JASPAR yes 54589461
chr17 46569133 46569146 HSF1 JASPAR yes 21250215
chr17 46569133 46569146 HSF1 JASPAR yes 54589462
chr17 46569135 46569145 NFATC3 JASPAR yes 21250216
chr17 46569135 46569145 NFATC3 JASPAR yes 54589463
chr17 46569135 46569150 STAT1 JASPAR yes 21250217
chr17 46569135 46569150 STAT1 JASPAR yes 54589464
chr17 46569136 46569143 NFATC2 JASPAR yes 21250218
chr17 46569136 46569143 NFATC2 JASPAR yes 54589465
chr17 46569137 46569148 STAT1 JASPAR yes 21250219
chr17 46569137 46569148 STAT3 JASPAR yes 21250220
chr17 46569137 46569148 STAT1 JASPAR yes 54589466
chr17 46569137 46569148 STAT3 JASPAR yes 54589467
chr17 46569150 46569155 SP1 TRANSFAC yes 21250221
chr17 46569150 46569155 SP1 TRANSFAC yes 54589468
chr17 46569153 46569166 NFKB1 JASPAR yes 21250222
chr17 46569153 46569166 NFKB2 JASPAR yes 21250223
chr17 46569153 46569166 NFKB1 JASPAR yes 54589469
chr17 46569153 46569166 NFKB2 JASPAR yes 54589470
chr17 46569154 46569164 NFKB1 JASPAR yes 21250224
chr17 46569154 46569164 RELA JASPAR yes 21250225
chr17 46569154 46569164 REL JASPAR yes 21250226
chr17 46569154 46569164 NFKB1 JASPAR yes 54589471
chr17 46569154 46569164 RELA JASPAR yes 54589472
chr17 46569154 46569164 REL JASPAR yes 54589473
chr17 46569154 46569165 NFKB1 JASPAR yes 21250227
chr17 46569154 46569165 NFKB1 JASPAR yes 54589474
chr17 46569155 46569165 NFKB1 JASPAR yes 21250228
chr17 46569155 46569165 RELA JASPAR yes 21250229
chr17 46569155 46569165 NFKB1 JASPAR yes 54589475
chr17 46569155 46569165 RELA JASPAR yes 54589476
chr17 46569155 46569166 NFKB1 JASPAR yes 21250230
chr17 46569155 46569166 NFKB1 JASPAR yes 54589477
chr17 46569156 46569166 RELA JASPAR yes 21250231
chr17 46569156 46569166 REL JASPAR yes 21250232
chr17 46569156 46569166 RELA JASPAR yes 54589478
chr17 46569156 46569166 REL JASPAR yes 54589479
chr17 46569157 46569172 STAT1 JASPAR yes 21250233
chr17 46569157 46569172 STAT1 JASPAR yes 54589480
chr17 46569159 46569170 STAT1 JASPAR yes 21250234
chr17 46569159 46569170 STAT3 JASPAR yes 21250235
chr17 46569159 46569170 STAT1 JASPAR yes 54589481
chr17 46569159 46569170 STAT3 JASPAR yes 54589482
chr17 46569174 46569195 IRF1 JASPAR yes 21250236
chr17 46569174 46569195 IRF1 JASPAR yes 54589483
chr17 46569176 46569181 ETS2 TRANSFAC yes 21250237
chr17 46569176 46569181 ETS2 TRANSFAC yes 54589484
chr17 46569177 46569191 SPI1 JASPAR yes 21250238
chr17 46569177 46569191 SPIC JASPAR yes 21250239
chr17 46569177 46569191 SPI1 JASPAR yes 54589485
chr17 46569177 46569191 SPIC JASPAR yes 54589486
chr17 46569178 46569186 EHF JASPAR yes 21250240
chr17 46569178 46569186 EHF JASPAR yes 54589487
chr17 46569180 46569187 SPIB JASPAR yes 21250241
chr17 46569180 46569187 SPIB JASPAR yes 54589488
chr17 46569201 46569216 HSF1 JASPAR yes 21250242
chr17 46569201 46569216 HSF1 JASPAR yes 54589489
chr17 46569222 46569234 FOXI1 JASPAR yes 21250243
chr17 46569222 46569234 FOXI1 JASPAR yes 54589490
SNP sites on vista25027[chr17:46569094-46569227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46569114 rs149458045 C T
FOXI1 HOXC12 HOXD12 MEF2A MEF2C
4910087
chr17 46569115 rs73330022 G A
FOXF2 FOXI1 FOXP2 HOXC12 HOXD12 MEF2A MEF2C
4910088
chr17 46569216 rs8072250 A G
HSF1
4910089
Genes possibly regulated by vista25027[chr17:46569094-46569227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46210802 46507637 - SKAP1 ENSG00000141293.11 46507637 0.93 1.0 15989 38543
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 60868
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 45786
chr17 46652875 46657473 - HOXB4 ENSG00000182742.5 46657473 0.87 0.99 15993 11754
Expression level of Genes
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miRNAs possibly regulated by vista25027[chr17:46569094-46569227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results