EnhancerDB
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  3. vista25028[chr17:46583139-46583523]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25028[chr17:46583139-46583523]
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Tissue distribution of vista25028
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Transcription factor that possibly regulate vista25028[chr17:46583139-46583523]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46583200 46583563 JUN UCSC Txn Factor no Conserved 108268275
chr17 46583211 46583449 RUNX3 UCSC Txn Factor no Conserved 108268277
chr17 46583214 46583541 JUND UCSC Txn Factor no Conserved 108268280
chr17 46583241 46583517 FOS UCSC Txn Factor no Conserved 108268284
chr17 46583256 46583500 FOSL2 UCSC Txn Factor no Conserved 108268291
chr17 46583169 46583183 SPIC JASPAR yes 21250244
chr17 46583169 46583183 SPIC JASPAR yes 54591472
chr17 46583174 46583179 ETS2 TRANSFAC yes 21250245
chr17 46583174 46583179 ETS2 TRANSFAC yes 54591473
chr17 46583182 46583197 FOXP1 JASPAR yes 21250246
chr17 46583182 46583197 FOXP1 JASPAR yes 54591474
chr17 46583183 46583194 FOXA1 JASPAR yes 21250247
chr17 46583183 46583194 FOXA1 JASPAR yes 54591475
chr17 46583183 46583198 FOXA1 JASPAR yes 21250248
chr17 46583183 46583198 FOXA1 JASPAR yes 54591476
chr17 46583184 46583192 FOXL1 JASPAR yes 21250249
chr17 46583184 46583192 FOXL1 JASPAR yes 54591477
chr17 46583184 46583195 FOXB1 JASPAR yes 21250250
chr17 46583184 46583195 FOXC1 JASPAR yes 21250251
chr17 46583184 46583195 FOXB1 JASPAR yes 54591478
chr17 46583184 46583195 FOXC1 JASPAR yes 54591479
chr17 46583184 46583196 FOXC2 JASPAR yes 21250252
chr17 46583184 46583196 FOXC2 JASPAR yes 54591480
chr17 46583185 46583196 FOXP2 JASPAR yes 21250253
chr17 46583185 46583196 FOXP2 JASPAR yes 54591481
chr17 46583186 46583194 FOXO3 JASPAR yes 21250254
chr17 46583186 46583194 FOXO3 JASPAR yes 54591482
chr17 46583187 46583194 FOXD2 JASPAR yes 21250255
chr17 46583187 46583194 FOXI1 JASPAR yes 21250256
chr17 46583187 46583194 FOXL1 JASPAR yes 21250257
chr17 46583187 46583194 FOXO4 JASPAR yes 21250258
chr17 46583187 46583194 FOXO6 JASPAR yes 21250259
chr17 46583187 46583194 FOXP3 JASPAR yes 21250260
chr17 46583187 46583194 FOXD2 JASPAR yes 54591483
chr17 46583187 46583194 FOXI1 JASPAR yes 54591484
chr17 46583187 46583194 FOXL1 JASPAR yes 54591485
chr17 46583187 46583194 FOXO4 JASPAR yes 54591486
chr17 46583187 46583194 FOXO6 JASPAR yes 54591487
chr17 46583187 46583194 FOXP3 JASPAR yes 54591488
chr17 46583187 46583195 FOXD1 JASPAR yes 21250261
chr17 46583187 46583195 FOXG1 JASPAR yes 21250262
chr17 46583187 46583195 FOXO3 JASPAR yes 21250263
chr17 46583187 46583195 FOXD1 JASPAR yes 54591489
chr17 46583187 46583195 FOXG1 JASPAR yes 54591490
chr17 46583187 46583195 FOXO3 JASPAR yes 54591491
chr17 46583190 46583200 FIGLA JASPAR yes 21250264
chr17 46583190 46583200 ID4 JASPAR yes 21250265
chr17 46583190 46583200 MSC JASPAR yes 21250266
chr17 46583190 46583200 TCF3 JASPAR yes 21250267
chr17 46583190 46583200 TCF4 JASPAR yes 21250268
chr17 46583190 46583200 FIGLA JASPAR yes 54591492
chr17 46583190 46583200 ID4 JASPAR yes 54591493
chr17 46583190 46583200 MSC JASPAR yes 54591494
chr17 46583190 46583200 TCF3 JASPAR yes 54591495
chr17 46583190 46583200 TCF4 JASPAR yes 54591496
chr17 46583191 46583200 SNAI2 JASPAR yes 21250269
chr17 46583191 46583200 SNAI2 JASPAR yes 54591497
chr17 46583192 46583197 USF2 TRANSFAC yes 21250270
chr17 46583192 46583197 USF2 TRANSFAC yes 54591498
chr17 46583212 46583222 FIGLA JASPAR yes 21250271
chr17 46583212 46583222 ID4 JASPAR yes 21250272
chr17 46583212 46583222 TCF3 JASPAR yes 21250273
chr17 46583212 46583222 TCF4 JASPAR yes 21250274
chr17 46583212 46583222 FIGLA JASPAR yes 54591499
chr17 46583212 46583222 ID4 JASPAR yes 54591500
chr17 46583212 46583222 TCF3 JASPAR yes 54591501
chr17 46583212 46583222 TCF4 JASPAR yes 54591502
chr17 46583214 46583223 ZEB1 JASPAR yes 21250275
chr17 46583214 46583223 ZEB1 JASPAR yes 54591503
chr17 46583215 46583223 TBX5 JASPAR yes 21250276
chr17 46583215 46583223 TBX5 JASPAR yes 54591504
chr17 46583225 46583237 FOXI1 JASPAR yes 21250277
chr17 46583225 46583237 FOXI1 JASPAR yes 54591505
chr17 46583232 46583236 YY1 TRANSFAC yes 21250278
chr17 46583232 46583236 YY1 TRANSFAC yes 54591506
chr17 46583236 46583247 RUNX1 JASPAR yes 21250279
chr17 46583236 46583247 RUNX1 JASPAR yes 54591507
chr17 46583246 46583255 SRY JASPAR yes 21250280
chr17 46583246 46583255 SRY JASPAR yes 54591508
chr17 46583249 46583261 HNF1B JASPAR yes 21250281
chr17 46583249 46583261 HNF1B JASPAR yes 54591509
chr17 46583251 46583258 NKX3-1 JASPAR yes 21250282
chr17 46583251 46583258 NKX3-1 JASPAR yes 54591510
chr17 46583255 46583265 RORA JASPAR yes 21250283
chr17 46583255 46583265 RORA JASPAR yes 54591511
chr17 46583255 46583270 JUND JASPAR yes 21250284
chr17 46583255 46583270 JUND JASPAR yes 54591512
chr17 46583260 46583264 ESR1 TRANSFAC yes 21250285
chr17 46583260 46583264 ESR1 TRANSFAC yes 54591513
chr17 46583263 46583273 NFIA JASPAR yes 21250286
chr17 46583263 46583273 NFIA JASPAR yes 54591514
chr17 46583264 46583279 MEF2C JASPAR yes 21250287
chr17 46583264 46583279 MEF2C JASPAR yes 54591515
chr17 46583264 46583285 IRF1 JASPAR yes 21250288
chr17 46583264 46583285 IRF1 JASPAR yes 54591516
chr17 46583265 46583271 NFIC JASPAR yes 21250289
chr17 46583265 46583271 NFIC JASPAR yes 54591517
chr17 46583267 46583282 FOXP1 JASPAR yes 21250290
chr17 46583267 46583282 FOXP1 JASPAR yes 54591518
chr17 46583269 46583284 FOXP1 JASPAR yes 21250291
chr17 46583269 46583284 FOXP1 JASPAR yes 54591519
chr17 46583270 46583291 IRF1 JASPAR yes 21250292
chr17 46583270 46583291 IRF1 JASPAR yes 54591520
chr17 46583304 46583315 CEBPB JASPAR yes 21250293
chr17 46583304 46583315 CEBPB JASPAR yes 54591521
chr17 46583304 46583316 HLF JASPAR yes 21250294
chr17 46583304 46583316 HLF JASPAR yes 54591522
chr17 46583305 46583316 CEBPA JASPAR yes 21250295
chr17 46583305 46583316 CEBPA JASPAR yes 54591523
chr17 46583337 46583348 RUNX1 JASPAR yes 21250296
chr17 46583337 46583348 RUNX1 JASPAR yes 54591524
chr17 46583337 46583349 GLI2 JASPAR yes 21250297
chr17 46583337 46583349 GLI2 JASPAR yes 54591525
chr17 46583339 46583358 RFX2 JASPAR yes 21250298
chr17 46583339 46583358 RFX2 JASPAR yes 54591526
chr17 46583343 46583347 ESR1 TRANSFAC yes 21250299
chr17 46583343 46583347 ESR1 TRANSFAC yes 54591527
chr17 46583343 46583359 RFX2 JASPAR yes 21250300
chr17 46583343 46583359 RFX3 JASPAR yes 21250301
chr17 46583343 46583359 RFX4 JASPAR yes 21250302
chr17 46583343 46583359 RFX5 JASPAR yes 21250303
chr17 46583343 46583359 RFX2 JASPAR yes 54591528
chr17 46583343 46583359 RFX3 JASPAR yes 54591529
chr17 46583343 46583359 RFX4 JASPAR yes 54591530
chr17 46583343 46583359 RFX5 JASPAR yes 54591531
chr17 46583344 46583363 RFX2 JASPAR yes 21250304
chr17 46583344 46583363 RFX2 JASPAR yes 54591532
chr17 46583370 46583384 JUN JASPAR yes 21250305
chr17 46583370 46583384 JUN JASPAR yes 54591533
chr17 46583372 46583383 BATF JASPAR yes 21250306
chr17 46583372 46583383 BATF JASPAR yes 54591534
chr17 46583373 46583384 FOSL2 JASPAR yes 21250307
chr17 46583373 46583384 JUNB JASPAR yes 21250308
chr17 46583373 46583384 FOSL2 JASPAR yes 54591535
chr17 46583373 46583384 JUNB JASPAR yes 54591536
chr17 46583374 46583383 NFE2 TRANSFAC yes 21250309
chr17 46583374 46583383 NFE2 TRANSFAC yes 54591537
chr17 46583374 46583385 FOS JASPAR yes 21250310
chr17 46583374 46583385 FOSL1 JASPAR yes 21250311
chr17 46583374 46583385 JUND JASPAR yes 21250312
chr17 46583374 46583385 NFE2 JASPAR yes 21250313
chr17 46583374 46583385 FOS JASPAR yes 54591538
chr17 46583374 46583385 FOSL1 JASPAR yes 54591539
chr17 46583374 46583385 JUND JASPAR yes 54591540
chr17 46583374 46583385 NFE2 JASPAR yes 54591541
chr17 46583375 46583384 JDP2 JASPAR yes 21250314
chr17 46583375 46583384 JDP2 JASPAR yes 54591542
chr17 46583375 46583386 FOSL2 JASPAR yes 21250315
chr17 46583375 46583386 JUNB JASPAR yes 21250316
chr17 46583375 46583386 FOSL2 JASPAR yes 54591543
chr17 46583375 46583386 JUNB JASPAR yes 54591544
chr17 46583375 46583389 JUN JASPAR yes 21250317
chr17 46583375 46583389 JUN JASPAR yes 54591545
chr17 46583376 46583387 BATF JASPAR yes 21250318
chr17 46583376 46583387 BATF JASPAR yes 54591546
chr17 46583399 46583408 POU3F4 JASPAR yes 21250319
chr17 46583399 46583408 POU3F4 JASPAR yes 54591547
chr17 46583402 46583413 FLI1 JASPAR yes 21250320
chr17 46583402 46583413 FLI1 JASPAR yes 54591548
chr17 46583403 46583413 ERF JASPAR yes 21250321
chr17 46583403 46583413 ERG JASPAR yes 21250322
chr17 46583403 46583413 ETS1 JASPAR yes 21250323
chr17 46583403 46583413 ERF JASPAR yes 54591549
chr17 46583403 46583413 ERG JASPAR yes 54591550
chr17 46583403 46583413 ETS1 JASPAR yes 54591551
chr17 46583403 46583414 ETV2 JASPAR yes 21250324
chr17 46583403 46583414 SPDEF JASPAR yes 21250325
chr17 46583403 46583414 ETV2 JASPAR yes 54591552
chr17 46583403 46583414 SPDEF JASPAR yes 54591553
chr17 46583414 46583418 H4TF2 TRANSFAC yes 21250326
chr17 46583414 46583418 H4TF2 TRANSFAC yes 54591554
chr17 46583436 46583446 MAX JASPAR yes 21250327
chr17 46583436 46583446 MAX JASPAR yes 54591555
chr17 46583437 46583447 NEUROG2 JASPAR yes 21250328
chr17 46583437 46583447 NEUROG2 JASPAR yes 54591556
chr17 46583458 46583475 BCL6B JASPAR yes 21250329
chr17 46583458 46583475 BCL6B JASPAR yes 54591557
chr17 46583464 46583474 NFATC3 JASPAR yes 21250330
chr17 46583464 46583474 NFATC3 JASPAR yes 54591558
chr17 46583466 46583473 NFATC2 JASPAR yes 21250331
chr17 46583466 46583473 NFATC2 JASPAR yes 54591559
chr17 46583469 46583487 TP53 JASPAR yes 21250332
chr17 46583469 46583487 TP63 JASPAR yes 21250333
chr17 46583469 46583487 TP53 JASPAR yes 54591560
chr17 46583469 46583487 TP63 JASPAR yes 54591561
SNP sites on vista25028[chr17:46583139-46583523]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46583221 rs538199868 T C
FIGLA ID4 JUN JUND RUNX3 TBX5 TCF3 TCF4 ZEB1
4910283
chr17 46583299 rs145161713 A G
FOS FOSL2 JUN JUND RUNX3
4910284
chr17 46583385 rs554890250 C T
BATF FOS FOSL1 FOSL2 JUN JUNB JUND NFE2 RUNX3
4910285
chr17 46583398 rs115963610 A G
FOS FOSL2 JUN JUND RUNX3
4910286
chr17 46583520 rs8066613 T A
JUN JUND
4910287
Genes possibly regulated by vista25028[chr17:46583139-46583523]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46210802 46507637 - SKAP1 ENSG00000141293.11 46507637 0.93 1.0 15989 24498
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 75164
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 60082
chr17 46626232 46682274 - HOXB3 ENSG00000120093.7 46682274 0.96 1.0 15992 1249
chr17 46652875 46657473 - HOXB4 ENSG00000182742.5 46657473 0.87 0.99 15993 26050
chr17 46668619 46671323 - HOXB5 ENSG00000120075.5 46671323 0.95 1.0 15994 12200
chr17 46671639 46682354 - HOXB6 ENSG00000108511.8 46682354 0.99 1.0 15995 1169
Expression level of Genes
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miRNAs possibly regulated by vista25028[chr17:46583139-46583523]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results