EnhancerDB
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  3. vista25036[chr17:46662223-46662405]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25036[chr17:46662223-46662405]
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Tissue distribution of vista25036
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Transcription factor that possibly regulate vista25036[chr17:46662223-46662405]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46662252 46662263 TBX20 JASPAR yes 21250759
chr17 46662252 46662263 TBX20 JASPAR yes 54594234
chr17 46662267 46662277 SP1 TRANSFAC yes 21250760
chr17 46662267 46662277 SP1 TRANSFAC yes 54594235
chr17 46662267 46662288 ZNF263 JASPAR yes 21250761
chr17 46662267 46662288 ZNF263 JASPAR yes 54594236
chr17 46662268 46662278 SP1 JASPAR yes 21250762
chr17 46662268 46662278 SP1 JASPAR yes 54594237
chr17 46662269 46662275 SP1 TRANSFAC yes 21250763
chr17 46662269 46662275 SP1 TRANSFAC yes 54594238
chr17 46662269 46662279 SP1 JASPAR yes 21250764
chr17 46662269 46662279 SP1 JASPAR yes 54594239
chr17 46662270 46662290 RREB1 JASPAR yes 21250765
chr17 46662270 46662290 RREB1 JASPAR yes 54594240
chr17 46662271 46662281 ZNF740 JASPAR yes 21250766
chr17 46662271 46662281 ZNF740 JASPAR yes 54594241
chr17 46662273 46662287 PLAG1 JASPAR yes 21250767
chr17 46662273 46662287 PLAG1 JASPAR yes 54594242
chr17 46662273 46662293 RREB1 JASPAR yes 21250768
chr17 46662273 46662293 RREB1 JASPAR yes 54594243
chr17 46662274 46662294 RREB1 JASPAR yes 21250769
chr17 46662274 46662294 RREB1 JASPAR yes 54594244
chr17 46662278 46662298 RREB1 JASPAR yes 21250770
chr17 46662278 46662298 RREB1 JASPAR yes 54594245
chr17 46662280 46662285 SP1 TRANSFAC yes 21250771
chr17 46662280 46662285 SP1 TRANSFAC yes 54594246
chr17 46662280 46662286 SP1 TRANSFAC yes 21250772
chr17 46662280 46662286 SP1 TRANSFAC yes 54594247
chr17 46662282 46662291 SP1 TRANSFAC yes 21250773
chr17 46662282 46662291 SP1 TRANSFAC yes 54594248
chr17 46662283 46662303 RREB1 JASPAR yes 21250774
chr17 46662283 46662303 RREB1 JASPAR yes 54594249
chr17 46662287 46662295 SP1 TRANSFAC yes 21250775
chr17 46662287 46662295 SP1 TRANSFAC yes 54594250
chr17 46662287 46662297 SP1 JASPAR yes 21250776
chr17 46662287 46662297 SP1 JASPAR yes 54594251
chr17 46662288 46662294 SP1 TRANSFAC yes 21250777
chr17 46662288 46662294 SP1 TRANSFAC yes 54594252
chr17 46662288 46662298 SP1 JASPAR yes 21250778
chr17 46662288 46662298 SP1 JASPAR yes 54594253
chr17 46662289 46662296 SP1 TRANSFAC yes 21250779
chr17 46662289 46662296 SP1 TRANSFAC yes 54594254
chr17 46662290 46662295 SP1 TRANSFAC yes 21250780
chr17 46662290 46662295 SP1 TRANSFAC yes 54594255
chr17 46662290 46662296 SP1 TRANSFAC yes 21250781
chr17 46662290 46662296 SP1 TRANSFAC yes 54594256
chr17 46662290 46662297 SP1 TRANSFAC yes 21250782
chr17 46662290 46662297 SP1 TRANSFAC yes 54594257
chr17 46662291 46662299 WT1 TRANSFAC yes 21250783
chr17 46662291 46662299 WT1 TRANSFAC yes 54594258
chr17 46662294 46662300 SP1 TRANSFAC yes 21250784
chr17 46662294 46662300 SP1 TRANSFAC yes 54594259
chr17 46662324 46662338 PAX6 JASPAR yes 21250785
chr17 46662324 46662338 PAX6 JASPAR yes 54594260
chr17 46662334 46662352 RARA JASPAR yes 21250786
chr17 46662334 46662352 RARA JASPAR yes 54594261
chr17 46662341 46662354 NR2F1 JASPAR yes 21250787
chr17 46662341 46662354 NR2F1 JASPAR yes 54594262
chr17 46662345 46662359 RXRB JASPAR yes 21250788
chr17 46662345 46662359 RXRG JASPAR yes 21250789
chr17 46662345 46662359 RXRB JASPAR yes 54594263
chr17 46662345 46662359 RXRG JASPAR yes 54594264
chr17 46662345 46662360 NR2C2 JASPAR yes 21250790
chr17 46662345 46662360 NR2C2 JASPAR yes 54594265
chr17 46662363 46662375 TFAP2A JASPAR yes 21250791
chr17 46662363 46662375 TFAP2A JASPAR yes 54594266
chr17 46662364 46662370 SP1 TRANSFAC yes 21250792
chr17 46662364 46662370 SP1 TRANSFAC yes 54594267
chr17 46662364 46662375 TFAP2A JASPAR yes 21250793
chr17 46662364 46662375 TFAP2B JASPAR yes 21250794
chr17 46662364 46662375 TFAP2A JASPAR yes 54594268
chr17 46662364 46662375 TFAP2B JASPAR yes 54594269
chr17 46662376 46662379 MYB TRANSFAC yes 21250795
chr17 46662376 46662379 MYB TRANSFAC yes 54594270
SNP sites on vista25036[chr17:46662223-46662405]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46662280 rs529251303 A C
PLAG1 RREB1 SP1 ZNF263 ZNF740
4910828
chr17 46662283 rs138488005 G A,C
PLAG1 RREB1 SP1 ZNF263
4910829
chr17 46662302 rs551215569 G A
RREB1
4910830
Genes possibly regulated by vista25036[chr17:46662223-46662405]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 46136
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 61218
chr17 46626232 46682274 - HOXB3 ENSG00000120093.7 46682274 0.96 1.0 15992 80131
chr17 46652875 46657473 - HOXB4 ENSG00000182742.5 46657473 0.87 0.99 15993 95250
chr17 46668619 46671323 - HOXB5 ENSG00000120075.5 46671323 0.95 1.0 15994 91082
chr17 46671639 46682354 - HOXB6 ENSG00000108511.8 46682354 0.99 1.0 15995 80051
chr17 46684594 46710934 - HOXB7 ENSG00000260027.3 46710934 0.95 1.0 15996 51471
chr17 46688739 46692478 - HOXB8 ENSG00000120068.5 46692478 0.99 1.0 15997 69927
chr17 46698518 46703839 - HOXB9 ENSG00000170689.8 46703839 0.99 1.0 15998 58566
Expression level of Genes
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miRNAs possibly regulated by vista25036[chr17:46662223-46662405]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results