EnhancerDB
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  3. vista25038[chr17:46664992-46665342]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25038[chr17:46664992-46665342]
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Tissue distribution of vista25038
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Transcription factor that possibly regulate vista25038[chr17:46664992-46665342]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 46664997 46665000 MYB TRANSFAC yes 21250871
chr17 46664997 46665000 MYB TRANSFAC yes 54594576
chr17 46665013 46665018 ETS2 TRANSFAC yes 21250872
chr17 46665013 46665018 ETS2 TRANSFAC yes 54594577
chr17 46665021 46665029 ISL2 JASPAR yes 21250873
chr17 46665021 46665029 ISL2 JASPAR yes 54594578
chr17 46665021 46665030 NKX3-2 JASPAR yes 21250874
chr17 46665021 46665030 NKX3-2 JASPAR yes 54594579
chr17 46665046 46665053 SPIB JASPAR yes 21250875
chr17 46665046 46665053 SPIB JASPAR yes 54594580
chr17 46665046 46665057 FLI1 JASPAR yes 21250876
chr17 46665046 46665057 FLI1 JASPAR yes 54594581
chr17 46665051 46665064 JUN JASPAR yes 21250877
chr17 46665051 46665064 JUN JASPAR yes 54594582
chr17 46665052 46665065 ATF4 JASPAR yes 21250878
chr17 46665052 46665065 ATF4 JASPAR yes 54594583
chr17 46665055 46665071 SRF JASPAR yes 21250879
chr17 46665055 46665071 SRF JASPAR yes 54594584
chr17 46665066 46665070 LFA1 TRANSFAC yes 21250880
chr17 46665066 46665070 LFA1 TRANSFAC yes 54594585
chr17 46665090 46665100 RELA JASPAR yes 21250881
chr17 46665090 46665100 RELA JASPAR yes 54594586
chr17 46665096 46665111 FOXA1 JASPAR yes 21250882
chr17 46665096 46665111 FOXA1 JASPAR yes 54594587
chr17 46665097 46665112 FOXP1 JASPAR yes 21250883
chr17 46665097 46665112 FOXP1 JASPAR yes 54594588
chr17 46665098 46665109 FOXP2 JASPAR yes 21250884
chr17 46665098 46665109 FOXP2 JASPAR yes 54594589
chr17 46665099 46665107 FOXD1 JASPAR yes 21250885
chr17 46665099 46665107 FOXO3 JASPAR yes 21250886
chr17 46665099 46665107 FOXD1 JASPAR yes 54594590
chr17 46665099 46665107 FOXO3 JASPAR yes 54594591
chr17 46665099 46665110 FOXB1 JASPAR yes 21250887
chr17 46665099 46665110 FOXB1 JASPAR yes 54594592
chr17 46665100 46665107 FOXD2 JASPAR yes 21250888
chr17 46665100 46665107 FOXI1 JASPAR yes 21250889
chr17 46665100 46665107 FOXL1 JASPAR yes 21250890
chr17 46665100 46665107 FOXO4 JASPAR yes 21250891
chr17 46665100 46665107 FOXO6 JASPAR yes 21250892
chr17 46665100 46665107 FOXP3 JASPAR yes 21250893
chr17 46665100 46665107 FOXD2 JASPAR yes 54594593
chr17 46665100 46665107 FOXI1 JASPAR yes 54594594
chr17 46665100 46665107 FOXL1 JASPAR yes 54594595
chr17 46665100 46665107 FOXO4 JASPAR yes 54594596
chr17 46665100 46665107 FOXO6 JASPAR yes 54594597
chr17 46665100 46665107 FOXP3 JASPAR yes 54594598
chr17 46665100 46665108 FOXO3 JASPAR yes 21250894
chr17 46665100 46665108 FOXO3 JASPAR yes 54594599
chr17 46665100 46665111 FOXA1 JASPAR yes 21250895
chr17 46665100 46665111 FOXA1 JASPAR yes 54594600
chr17 46665115 46665126 FLI1 JASPAR yes 21250896
chr17 46665115 46665126 FLI1 JASPAR yes 54594601
chr17 46665116 46665126 ETV6 JASPAR yes 21250897
chr17 46665116 46665126 ETV6 JASPAR yes 54594602
chr17 46665116 46665129 ELF1 JASPAR yes 21250898
chr17 46665116 46665129 ELF1 JASPAR yes 54594603
chr17 46665117 46665124 SPI1 JASPAR yes 21250899
chr17 46665117 46665124 SPI1 JASPAR yes 54594604
chr17 46665117 46665125 EHF JASPAR yes 21250900
chr17 46665117 46665125 EHF JASPAR yes 54594605
chr17 46665120 46665131 E2F6 JASPAR yes 21250901
chr17 46665120 46665131 E2F6 JASPAR yes 54594606
chr17 46665126 46665140 PLAG1 JASPAR yes 21250902
chr17 46665126 46665140 PLAG1 JASPAR yes 54594607
chr17 46665141 46665156 STAT2 JASPAR yes 21250903
chr17 46665141 46665156 STAT2 JASPAR yes 54594608
chr17 46665142 46665157 FOXP1 JASPAR yes 21250904
chr17 46665142 46665157 FOXP1 JASPAR yes 54594609
chr17 46665142 46665163 IRF1 JASPAR yes 21250905
chr17 46665142 46665163 IRF1 JASPAR yes 54594610
chr17 46665144 46665164 RREB1 JASPAR yes 21250906
chr17 46665144 46665164 RREB1 JASPAR yes 54594611
chr17 46665147 46665159 IRF1 JASPAR yes 21250907
chr17 46665147 46665159 IRF1 JASPAR yes 54594612
chr17 46665147 46665162 FOXP1 JASPAR yes 21250908
chr17 46665147 46665162 FOXP1 JASPAR yes 54594613
chr17 46665149 46665169 RREB1 JASPAR yes 21250909
chr17 46665149 46665169 RREB1 JASPAR yes 54594614
chr17 46665154 46665166 FOXI1 JASPAR yes 21250910
chr17 46665154 46665166 FOXI1 JASPAR yes 54594615
chr17 46665154 46665174 RREB1 JASPAR yes 21250911
chr17 46665154 46665174 RREB1 JASPAR yes 54594616
chr17 46665161 46665164 MYB TRANSFAC yes 21250912
chr17 46665161 46665164 MYB TRANSFAC yes 54594617
chr17 46665162 46665174 FOXI1 JASPAR yes 21250913
chr17 46665162 46665174 FOXI1 JASPAR yes 54594618
chr17 46665162 46665182 RREB1 JASPAR yes 21250914
chr17 46665162 46665182 RREB1 JASPAR yes 54594619
chr17 46665165 46665175 HOXB13 JASPAR yes 21250915
chr17 46665165 46665175 HOXB13 JASPAR yes 54594620
chr17 46665166 46665186 RREB1 JASPAR yes 21250916
chr17 46665166 46665186 RREB1 JASPAR yes 54594621
chr17 46665169 46665184 FOXP1 JASPAR yes 21250917
chr17 46665169 46665184 FOXP1 JASPAR yes 54594622
chr17 46665170 46665191 IRF1 JASPAR yes 21250918
chr17 46665170 46665191 IRF1 JASPAR yes 54594623
chr17 46665171 46665191 RREB1 JASPAR yes 21250919
chr17 46665171 46665191 RREB1 JASPAR yes 54594624
chr17 46665182 46665196 ONECUT1 JASPAR yes 21250920
chr17 46665182 46665196 ONECUT2 JASPAR yes 21250921
chr17 46665182 46665196 ONECUT3 JASPAR yes 21250922
chr17 46665182 46665196 ONECUT1 JASPAR yes 54594625
chr17 46665182 46665196 ONECUT2 JASPAR yes 54594626
chr17 46665182 46665196 ONECUT3 JASPAR yes 54594627
chr17 46665183 46665195 IRF1 JASPAR yes 21250923
chr17 46665183 46665195 IRF1 JASPAR yes 54594628
chr17 46665191 46665202 PHOX2A JASPAR yes 21250924
chr17 46665191 46665202 PHOX2A JASPAR yes 54594629
chr17 46665193 46665198 MYB TRANSFAC yes 21250925
chr17 46665193 46665198 MYB TRANSFAC yes 54594630
chr17 46665210 46665225 RFX5 JASPAR yes 21250926
chr17 46665210 46665225 RFX5 JASPAR yes 54594631
chr17 46665214 46665229 ESR2 JASPAR yes 21250927
chr17 46665214 46665229 ESR2 JASPAR yes 54594632
chr17 46665214 46665234 ESR1 JASPAR yes 21250928
chr17 46665214 46665234 ESR1 JASPAR yes 54594633
chr17 46665231 46665252 IRF1 JASPAR yes 21250929
chr17 46665231 46665252 IRF1 JASPAR yes 54594634
chr17 46665235 46665249 STAT1 JASPAR yes 21250930
chr17 46665235 46665249 STAT1 JASPAR yes 54594635
chr17 46665235 46665250 PRDM1 JASPAR yes 21250931
chr17 46665235 46665250 STAT2 JASPAR yes 21250932
chr17 46665235 46665250 PRDM1 JASPAR yes 54594636
chr17 46665235 46665250 STAT2 JASPAR yes 54594637
chr17 46665264 46665272 MEIS2 JASPAR yes 21250933
chr17 46665264 46665272 MEIS3 JASPAR yes 21250934
chr17 46665264 46665272 MEIS2 JASPAR yes 54594638
chr17 46665264 46665272 MEIS3 JASPAR yes 54594639
chr17 46665265 46665269 NFE TRANSFAC yes 21250935
chr17 46665265 46665269 NFE TRANSFAC yes 54594640
chr17 46665270 46665281 EBF1 JASPAR yes 21250936
chr17 46665270 46665281 EBF1 JASPAR yes 54594641
chr17 46665277 46665282 SP1 TRANSFAC yes 21250937
chr17 46665277 46665282 SP1 TRANSFAC yes 54594642
chr17 46665282 46665288 NFE2 TRANSFAC yes 21250938
chr17 46665282 46665288 NFE2 TRANSFAC yes 54594643
chr17 46665329 46665342 SCRT2 JASPAR yes 21250939
chr17 46665329 46665342 SCRT2 JASPAR yes 54594644
SNP sites on vista25038[chr17:46664992-46665342]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 46665020 rs74551329 G T no 4910860
chr17 46665085 rs536576966 GC G no 4910861
chr17 46665118 rs184186486 A G
EHF ELF1 ETV6 FLI1 SPI1
4910862
chr17 46665190 rs550108902 C A
IRF1 ONECUT1 ONECUT2 ONECUT3 RREB1
4910863
chr17 46665211 rs538682260 G A
RFX5
4910864
chr17 46665229 rs4793938 T G
ESR1 ESR2
4910865
chr17 46665235 rs4793939 G A
IRF1 PRDM1 STAT1 STAT2
4910866
Genes possibly regulated by vista25038[chr17:46664992-46665342]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 46605888 46608359 - HOXB1 ENSG00000120094.6 46608359 0.98 1.0 15990 43367
chr17 46618256 46623441 - HOXB2 ENSG00000173917.9 46623441 0.8 0.98 15991 58449
chr17 46626232 46682274 - HOXB3 ENSG00000120093.7 46682274 0.96 1.0 15992 83068
chr17 46652875 46657473 - HOXB4 ENSG00000182742.5 46657473 0.87 0.99 15993 92481
chr17 46668619 46671323 - HOXB5 ENSG00000120075.5 46671323 0.95 1.0 15994 94019
chr17 46671639 46682354 - HOXB6 ENSG00000108511.8 46682354 0.99 1.0 15995 82988
chr17 46684594 46710934 - HOXB7 ENSG00000260027.3 46710934 0.95 1.0 15996 54408
chr17 46688739 46692478 - HOXB8 ENSG00000120068.5 46692478 0.99 1.0 15997 72864
chr17 46698518 46703839 - HOXB9 ENSG00000170689.8 46703839 0.99 1.0 15998 61503
Expression level of Genes
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miRNAs possibly regulated by vista25038[chr17:46664992-46665342]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results