EnhancerDB
  1. Home
  2. Enhancers
  3. vista25058[chr17:47270202-47270509]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25058[chr17:47270202-47270509]
Back to top
Tissue distribution of vista25058
Back to top
Transcription factor that possibly regulate vista25058[chr17:47270202-47270509]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47268921 47270800 POLR2A UCSC Txn Factor no Conserved 108269005
chr17 47269671 47270206 RPC155 UCSC Txn Factor no Conserved 108269008
chr17 47270125 47270493 NFYB UCSC Txn Factor no Conserved 108269026
chr17 47270149 47270529 CHD2 UCSC Txn Factor no Conserved 108269031
chr17 47270179 47270502 NFYA UCSC Txn Factor no Conserved 108269039
chr17 47270217 47270487 FOS UCSC Txn Factor no Conserved 108269052
chr17 47270222 47270558 SP1 UCSC Txn Factor no Conserved 108269055
chr17 47270198 47270204 ETS1 JASPAR yes 21251605
chr17 47270198 47270204 SPI1 JASPAR yes 21251606
chr17 47270198 47270204 ETS1 JASPAR yes 54623335
chr17 47270198 47270204 SPI1 JASPAR yes 54623336
chr17 47270231 47270242 TFAP2A JASPAR yes 21251607
chr17 47270231 47270242 TFAP2C JASPAR yes 21251608
chr17 47270231 47270242 TFAP2A JASPAR yes 54623337
chr17 47270231 47270242 TFAP2C JASPAR yes 54623338
chr17 47270237 47270242 SP1 TRANSFAC yes 21251609
chr17 47270237 47270242 SP1 TRANSFAC yes 54623339
chr17 47270238 47270243 SP1 TRANSFAC yes 21251610
chr17 47270238 47270243 SP1 TRANSFAC yes 54623340
chr17 47270238 47270244 SP1 TRANSFAC yes 21251611
chr17 47270238 47270244 SP1 TRANSFAC yes 54623341
chr17 47270242 47270246 LFA1 TRANSFAC yes 21251612
chr17 47270242 47270246 LFA1 TRANSFAC yes 54623342
chr17 47270258 47270276 ESR1 JASPAR yes 21251613
chr17 47270258 47270276 ESR1 JASPAR yes 54623343
chr17 47270270 47270274 H4TF2 TRANSFAC yes 21251614
chr17 47270270 47270274 H4TF2 TRANSFAC yes 54623344
chr17 47270273 47270292 RFX2 JASPAR yes 21251615
chr17 47270273 47270292 RFX2 JASPAR yes 54623345
chr17 47270286 47270300 ATF7 JASPAR yes 21251616
chr17 47270286 47270300 BATF3 JASPAR yes 21251617
chr17 47270286 47270300 ATF7 JASPAR yes 54623346
chr17 47270286 47270300 BATF3 JASPAR yes 54623347
chr17 47270287 47270299 JDP2 JASPAR yes 21251618
chr17 47270287 47270299 JDP2 JASPAR yes 54623348
chr17 47270296 47270314 NFYA JASPAR yes 21251619
chr17 47270296 47270314 NFYA JASPAR yes 54623349
chr17 47270299 47270315 NFYA JASPAR yes 21251620
chr17 47270299 47270315 NFYA JASPAR yes 54623350
chr17 47270302 47270317 NFYB JASPAR yes 21251621
chr17 47270302 47270317 NFYB JASPAR yes 54623351
chr17 47270349 47270353 H1TF2 TRANSFAC yes 21251622
chr17 47270349 47270353 NFE TRANSFAC yes 21251623
chr17 47270349 47270353 SRF TRANSFAC yes 21251624
chr17 47270349 47270353 H1TF2 TRANSFAC yes 54623352
chr17 47270349 47270353 NFE TRANSFAC yes 54623353
chr17 47270349 47270353 SRF TRANSFAC yes 54623354
chr17 47270350 47270364 CREB3 JASPAR yes 21251625
chr17 47270350 47270364 CREB3 JASPAR yes 54623355
chr17 47270356 47270369 ZBED1 JASPAR yes 21251626
chr17 47270356 47270369 ZBED1 JASPAR yes 54623356
chr17 47270374 47270384 SP1 JASPAR yes 21251627
chr17 47270374 47270384 SP1 JASPAR yes 54623357
chr17 47270375 47270383 SP1 TRANSFAC yes 21251628
chr17 47270375 47270383 SP1 TRANSFAC yes 54623358
chr17 47270375 47270384 SP1 TRANSFAC yes 21251629
chr17 47270375 47270384 SP1 TRANSFAC yes 54623359
chr17 47270375 47270385 SP1 JASPAR yes 21251630
chr17 47270375 47270385 SP1 JASPAR yes 54623360
chr17 47270376 47270381 SP1 TRANSFAC yes 21251631
chr17 47270376 47270381 SP1 TRANSFAC yes 54623361
chr17 47270376 47270387 E2F4 JASPAR yes 21251632
chr17 47270376 47270387 E2F4 JASPAR yes 54623362
chr17 47270377 47270382 SP1 TRANSFAC yes 21251633
chr17 47270377 47270382 SP1 TRANSFAC yes 54623363
chr17 47270377 47270383 SP1 TRANSFAC yes 21251634
chr17 47270377 47270383 SP1 TRANSFAC yes 54623364
chr17 47270388 47270399 NRF1 JASPAR yes 21251635
chr17 47270388 47270399 NRF1 JASPAR yes 54623365
chr17 47270400 47270416 NFYA JASPAR yes 21251636
chr17 47270400 47270416 NFYA JASPAR yes 54623366
chr17 47270403 47270407 H1TF2 TRANSFAC yes 21251637
chr17 47270403 47270407 NFE TRANSFAC yes 21251638
chr17 47270403 47270407 SRF TRANSFAC yes 21251639
chr17 47270403 47270407 H1TF2 TRANSFAC yes 54623367
chr17 47270403 47270407 NFE TRANSFAC yes 54623368
chr17 47270403 47270407 SRF TRANSFAC yes 54623369
chr17 47270409 47270413 ESR1 TRANSFAC yes 21251640
chr17 47270409 47270413 ESR1 TRANSFAC yes 54623370
chr17 47270421 47270424 MYB TRANSFAC yes 21251641
chr17 47270421 47270424 MYB TRANSFAC yes 54623371
chr17 47270434 47270445 EBF1 JASPAR yes 21251642
chr17 47270434 47270445 EBF1 JASPAR yes 54623372
chr17 47270435 47270441 MZF1 JASPAR yes 21251643
chr17 47270435 47270441 MZF1 JASPAR yes 54623373
chr17 47270435 47270448 TFAP2A JASPAR yes 21251644
chr17 47270435 47270448 TFAP2C JASPAR yes 21251645
chr17 47270435 47270448 TFAP2A JASPAR yes 54623374
chr17 47270435 47270448 TFAP2C JASPAR yes 54623375
chr17 47270439 47270459 RREB1 JASPAR yes 21251646
chr17 47270439 47270459 RREB1 JASPAR yes 54623376
chr17 47270440 47270460 RREB1 JASPAR yes 21251647
chr17 47270440 47270460 RREB1 JASPAR yes 54623377
chr17 47270441 47270461 RREB1 JASPAR yes 21251648
chr17 47270441 47270461 RREB1 JASPAR yes 54623378
chr17 47270445 47270465 RREB1 JASPAR yes 21251649
chr17 47270445 47270465 RREB1 JASPAR yes 54623379
chr17 47270451 47270463 INSM1 JASPAR yes 21251650
chr17 47270451 47270463 INSM1 JASPAR yes 54623380
chr17 47270473 47270493 RREB1 JASPAR yes 21251651
chr17 47270473 47270493 RREB1 JASPAR yes 54623381
chr17 47270476 47270488 FOXI1 JASPAR yes 21251652
chr17 47270476 47270488 FOXI1 JASPAR yes 54623382
chr17 47270479 47270490 FOXA1 JASPAR yes 21251653
chr17 47270479 47270490 FOXA1 JASPAR yes 54623383
SNP sites on vista25058[chr17:47270202-47270509]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47270222 rs375633374 A G
CHD2 FOS NFYA NFYB POLR2A SP1
4914405
chr17 47270223 rs572796540 G A
CHD2 FOS NFYA NFYB POLR2A SP1
4914406
chr17 47270236 rs145975161 TC T
CHD2 FOS NFYA NFYB POLR2A SP1 TFAP2A TFAP2C
4914407
chr17 47270238 rs541810684 G C
CHD2 FOS NFYA NFYB POLR2A SP1 TFAP2A TFAP2C
4914408
chr17 47270294 rs73338358 G T
ATF7 BATF3 CHD2 FOS JDP2 NFYA NFYB POLR2A SP1
4914409
chr17 47270426 rs546828478 G A
CHD2 FOS NFYA NFYB POLR2A SP1
4914410
chr17 47270447 rs113739769 G C,T
CHD2 FOS NFYA NFYB POLR2A RREB1 SP1 TFAP2A TFAP2C
4914411
Genes possibly regulated by vista25058[chr17:47270202-47270509]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47209822 47247351 + B4GALNT2 ENSG00000167080.4 47209822 0.95 0.85 16008 39620
chr17 47280153 47287936 - GNGT2 ENSG00000167083.2 47287936 0.94 0.9 16009 82573
chr17 47287589 47300587 + ABI3 ENSG00000108798.4 47287589 0.9 0.91 16010 82920
chr17 47300724 47308128 - PHOSPHO1 ENSG00000173868.7 47308128 0.93 1.0 16011 62381
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25058[chr17:47270202-47270509]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results