EnhancerDB
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  3. vista25059[chr17:47278932-47279253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25059[chr17:47278932-47279253]
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Tissue distribution of vista25059
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Transcription factor that possibly regulate vista25059[chr17:47278932-47279253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47278935 47278945 ELK1 JASPAR yes 21251654
chr17 47278939 47278945 ETS1 JASPAR yes 21251655
chr17 47278939 47278945 SPI1 JASPAR yes 21251656
chr17 47278942 47278956 PLAG1 JASPAR yes 21251657
chr17 47278949 47278961 GLI2 JASPAR yes 21251658
chr17 47278952 47278957 SP1 TRANSFAC yes 21251659
chr17 47278953 47278963 SP1 JASPAR yes 21251660
chr17 47278954 47278963 SP1 TRANSFAC yes 21251661
chr17 47278955 47278960 SP1 TRANSFAC yes 21251662
chr17 47278956 47278961 SP1 TRANSFAC yes 21251663
chr17 47278956 47278962 SP1 TRANSFAC yes 21251664
chr17 47278968 47278972 NFE TRANSFAC yes 21251665
chr17 47278973 47278976 MYB TRANSFAC yes 21251666
chr17 47278981 47278989 EHF JASPAR yes 21251667
chr17 47278988 47278993 H4TF1 TRANSFAC yes 21251668
chr17 47278990 47279005 HSF1 JASPAR yes 21251669
chr17 47279025 47279029 YY1 TRANSFAC yes 21251670
chr17 47279027 47279045 NFYA JASPAR yes 21251671
chr17 47279034 47279044 MSC JASPAR yes 21251672
chr17 47279034 47279044 TFAP4 JASPAR yes 21251673
chr17 47279042 47279052 MZF1 JASPAR yes 21251674
chr17 47279045 47279051 SP1 TRANSFAC yes 21251675
chr17 47279052 47279070 SRF JASPAR yes 21251676
chr17 47279077 47279092 HSF1 JASPAR yes 21251677
chr17 47279130 47279144 JUN JASPAR yes 21251678
chr17 47279132 47279150 NR3C1 JASPAR yes 21251679
chr17 47279133 47279144 FOSL2 JASPAR yes 21251680
chr17 47279133 47279144 JUNB JASPAR yes 21251681
chr17 47279134 47279145 FOS JASPAR yes 21251682
chr17 47279135 47279149 JUN JASPAR yes 21251683
chr17 47279136 47279147 BATF JASPAR yes 21251684
chr17 47279136 47279147 DUX4 JASPAR yes 21251685
chr17 47279156 47279169 ELF1 JASPAR yes 21251686
chr17 47279157 47279169 EHF JASPAR yes 21251687
chr17 47279157 47279169 ELF1 JASPAR yes 21251688
chr17 47279157 47279170 ELF3 JASPAR yes 21251689
chr17 47279158 47279169 ELF5 JASPAR yes 21251690
chr17 47279160 47279168 FEV JASPAR yes 21251691
chr17 47279174 47279189 HSF1 JASPAR yes 21251692
chr17 47279185 47279206 ZNF263 JASPAR yes 21251693
chr17 47279187 47279197 ETV6 JASPAR yes 21251694
chr17 47279187 47279197 GABPA JASPAR yes 21251695
chr17 47279187 47279199 ELF4 JASPAR yes 21251696
chr17 47279187 47279201 SPI1 JASPAR yes 21251697
chr17 47279189 47279195 ETS1 JASPAR yes 21251698
chr17 47279189 47279195 SPI1 JASPAR yes 21251699
chr17 47279203 47279216 ELF1 JASPAR yes 21251700
chr17 47279213 47279222 NFIX JASPAR yes 21251701
chr17 47279214 47279220 NFIC JASPAR yes 21251702
chr17 47279239 47279243 YY1 TRANSFAC yes 21251703
SNP sites on vista25059[chr17:47278932-47279253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47279042 rs537446824 G C
MSC MZF1 NFYA TFAP4
4914536
chr17 47279128 rs9904295 C A no 4914537
chr17 47279175 rs553972205 G A
HSF1
4914538
chr17 47279192 rs568347659 T C
ELF4 ETS1 ETV6 GABPA SPI1 ZNF263
4914539
Genes possibly regulated by vista25059[chr17:47278932-47279253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47209822 47247351 + B4GALNT2 ENSG00000167080.4 47209822 0.95 0.85 16008 30890
chr17 47280153 47287936 - GNGT2 ENSG00000167083.2 47287936 0.94 0.9 16009 91317
chr17 47287589 47300587 + ABI3 ENSG00000108798.4 47287589 0.9 0.91 16010 91664
chr17 47300724 47308128 - PHOSPHO1 ENSG00000173868.7 47308128 0.93 1.0 16011 71125
Expression level of Genes
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miRNAs possibly regulated by vista25059[chr17:47278932-47279253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results