EnhancerDB
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  3. vista25060[chr17:47290816-47291067]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25060[chr17:47290816-47291067]
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Tissue distribution of vista25060
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Transcription factor that possibly regulate vista25060[chr17:47290816-47291067]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47290819 47290834 NR2C2 JASPAR yes 21251704
chr17 47290829 47290838 ZEB1 JASPAR yes 21251705
chr17 47290830 47290840 TCF3 JASPAR yes 21251706
chr17 47290830 47290840 TCF4 JASPAR yes 21251707
chr17 47290831 47290840 SNAI2 JASPAR yes 21251708
chr17 47290832 47290837 USF2 TRANSFAC yes 21251709
chr17 47290841 47290862 ZNF263 JASPAR yes 21251710
chr17 47290849 47290855 MZF1 JASPAR yes 21251711
chr17 47290850 47290870 RREB1 JASPAR yes 21251712
chr17 47290858 47290871 ZBTB18 JASPAR yes 21251713
chr17 47290865 47290876 STAT1 JASPAR yes 21251714
chr17 47290865 47290876 STAT3 JASPAR yes 21251715
chr17 47290880 47290885 TFAP2A TRANSFAC yes 21251716
chr17 47290880 47290886 MZF1 JASPAR yes 21251717
chr17 47290889 47290909 ESR1 JASPAR yes 21251718
chr17 47290890 47290895 ETS2 TRANSFAC yes 21251719
chr17 47290897 47290915 ESR1 JASPAR yes 21251720
chr17 47290898 47290913 ESR2 JASPAR yes 21251721
chr17 47290898 47290918 ESR1 JASPAR yes 21251722
chr17 47290901 47290912 ESRRA JASPAR yes 21251723
chr17 47290901 47290914 NR2F1 JASPAR yes 21251724
chr17 47290905 47290909 ESR1 TRANSFAC yes 21251725
chr17 47290906 47290913 USF2 TRANSFAC yes 21251726
chr17 47290908 47290913 USF2 TRANSFAC yes 21251727
chr17 47290925 47290944 PAX5 JASPAR yes 21251728
chr17 47290953 47290966 POU2F2 JASPAR yes 21251729
chr17 47290953 47290967 POU1F1 JASPAR yes 21251730
chr17 47290954 47290966 POU3F1 JASPAR yes 21251731
chr17 47290954 47290966 POU3F2 JASPAR yes 21251732
chr17 47290954 47290967 POU3F3 JASPAR yes 21251733
chr17 47290955 47290967 POU2F1 JASPAR yes 21251734
chr17 47290956 47290963 POU2F1 TRANSFAC yes 21251735
chr17 47290956 47290963 POU2F2C TRANSFAC yes 21251736
chr17 47290956 47290963 POU2F2 TRANSFAC yes 21251737
chr17 47290956 47290965 POU3F4 JASPAR yes 21251738
chr17 47290956 47290965 POU5F1B JASPAR yes 21251739
chr17 47290957 47290969 PBX1 JASPAR yes 21251740
chr17 47290977 47290996 REST JASPAR yes 21251741
chr17 47290990 47291008 ESR1 JASPAR yes 21251742
chr17 47290998 47291010 PKNOX1 JASPAR yes 21251743
chr17 47290998 47291010 PKNOX2 JASPAR yes 21251744
chr17 47290998 47291010 TGIF1 JASPAR yes 21251745
chr17 47290998 47291010 TGIF2 JASPAR yes 21251746
chr17 47290999 47291009 HEY2 JASPAR yes 21251747
chr17 47290999 47291009 ID4 JASPAR yes 21251748
chr17 47290999 47291009 MSC JASPAR yes 21251749
chr17 47290999 47291009 MYF6 JASPAR yes 21251750
chr17 47291000 47291009 SNAI2 JASPAR yes 21251751
chr17 47291001 47291006 USF2 TRANSFAC yes 21251752
chr17 47291004 47291008 NFE TRANSFAC yes 21251753
chr17 47291010 47291022 HINFP JASPAR yes 21251754
chr17 47291012 47291022 HINFP JASPAR yes 21251755
chr17 47291019 47291022 MYB TRANSFAC yes 21251756
chr17 47291035 47291051 GLIS1 JASPAR yes 21251757
chr17 47291039 47291051 INSM1 JASPAR yes 21251758
SNP sites on vista25060[chr17:47290816-47291067]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47290886 rs623682 A T
MZF1
4914581
chr17 47290979 rs564186590 C T
REST
4914582
chr17 47290992 rs189693749 G A
ESR1 REST
4914583
Genes possibly regulated by vista25060[chr17:47290816-47291067]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47209822 47247351 + B4GALNT2 ENSG00000167080.4 47209822 0.95 0.85 16008 19006
chr17 47280153 47287936 - GNGT2 ENSG00000167083.2 47287936 0.94 0.9 16009 97120
chr17 47287589 47300587 + ABI3 ENSG00000108798.4 47287589 0.9 0.91 16010 96773
chr17 47300724 47308128 - PHOSPHO1 ENSG00000173868.7 47308128 0.93 1.0 16011 82939
Expression level of Genes
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miRNAs possibly regulated by vista25060[chr17:47290816-47291067]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results