EnhancerDB
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  3. vista25063[chr17:47337469-47337918]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25063[chr17:47337469-47337918]
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Tissue distribution of vista25063
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Transcription factor that possibly regulate vista25063[chr17:47337469-47337918]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47337180 47338451 POLR2A UCSC Txn Factor no Conserved 108269291
chr17 47337471 47337476 NFY TRANSFAC yes 21251854
chr17 47337471 47337476 NFY TRANSFAC yes 54627048
chr17 47337481 47337492 NFKB1 JASPAR yes 21251855
chr17 47337481 47337492 NFKB1 JASPAR yes 54627049
chr17 47337484 47337499 STAT1 JASPAR yes 21251856
chr17 47337484 47337499 STAT1 JASPAR yes 54627050
chr17 47337486 47337497 STAT3 JASPAR yes 21251857
chr17 47337486 47337497 STAT3 JASPAR yes 54627051
chr17 47337490 47337501 FOXP2 JASPAR yes 21251858
chr17 47337490 47337501 FOXP2 JASPAR yes 54627052
chr17 47337491 47337499 FOXO3 JASPAR yes 21251859
chr17 47337491 47337499 FOXO3 JASPAR yes 54627053
chr17 47337504 47337515 E2F4 JASPAR yes 21251860
chr17 47337504 47337515 E2F4 JASPAR yes 54627054
chr17 47337506 47337515 SP1 TRANSFAC yes 21251861
chr17 47337506 47337515 SP1 TRANSFAC yes 54627055
chr17 47337507 47337513 SP1 TRANSFAC yes 21251862
chr17 47337507 47337513 SP1 TRANSFAC yes 54627056
chr17 47337507 47337517 SP1 JASPAR yes 21251863
chr17 47337507 47337517 SP1 JASPAR yes 54627057
chr17 47337508 47337515 SP1 TRANSFAC yes 21251864
chr17 47337508 47337515 SP1 TRANSFAC yes 54627058
chr17 47337509 47337514 SP1 TRANSFAC yes 21251865
chr17 47337509 47337514 SP1 TRANSFAC yes 54627059
chr17 47337509 47337515 SP1 TRANSFAC yes 21251866
chr17 47337509 47337515 SP1 TRANSFAC yes 54627060
chr17 47337509 47337516 SP1 TRANSFAC yes 21251867
chr17 47337509 47337516 SP1 TRANSFAC yes 54627061
chr17 47337511 47337520 TFAP2A JASPAR yes 21251868
chr17 47337511 47337520 TFAP2A JASPAR yes 54627062
chr17 47337522 47337526 NFE TRANSFAC yes 21251869
chr17 47337522 47337526 NFE TRANSFAC yes 54627063
chr17 47337532 47337546 MTF1 JASPAR yes 21251870
chr17 47337532 47337546 MTF1 JASPAR yes 54627064
chr17 47337540 47337550 RELA JASPAR yes 21251871
chr17 47337540 47337550 REL JASPAR yes 21251872
chr17 47337540 47337550 RELA JASPAR yes 54627065
chr17 47337540 47337550 REL JASPAR yes 54627066
chr17 47337540 47337551 NFKB1 JASPAR yes 21251873
chr17 47337540 47337551 NFKB1 JASPAR yes 54627067
chr17 47337541 47337551 RELA JASPAR yes 21251874
chr17 47337541 47337551 REL JASPAR yes 21251875
chr17 47337541 47337551 RELA JASPAR yes 54627068
chr17 47337541 47337551 REL JASPAR yes 54627069
chr17 47337542 47337552 TEAD4 JASPAR yes 21251876
chr17 47337542 47337552 TEAD4 JASPAR yes 54627070
chr17 47337572 47337581 SRY JASPAR yes 21251877
chr17 47337572 47337581 SRY JASPAR yes 54627071
chr17 47337574 47337583 SOX9 JASPAR yes 21251878
chr17 47337574 47337583 SOX9 JASPAR yes 54627072
chr17 47337615 47337630 NR2C2 JASPAR yes 21251879
chr17 47337615 47337630 NR2C2 JASPAR yes 54627073
chr17 47337616 47337623 SP1 TRANSFAC yes 21251880
chr17 47337616 47337623 SP1 TRANSFAC yes 54627074
chr17 47337616 47337626 SP1 JASPAR yes 21251881
chr17 47337616 47337626 SP1 JASPAR yes 54627075
chr17 47337617 47337625 SP1 TRANSFAC yes 21251882
chr17 47337617 47337625 SP1 TRANSFAC yes 54627076
chr17 47337618 47337623 SP1 TRANSFAC yes 21251883
chr17 47337618 47337623 SP1 TRANSFAC yes 54627077
chr17 47337619 47337624 SP1 TRANSFAC yes 21251884
chr17 47337619 47337624 SP1 TRANSFAC yes 54627078
chr17 47337619 47337625 SP1 TRANSFAC yes 21251885
chr17 47337619 47337625 SP1 TRANSFAC yes 54627079
chr17 47337623 47337628 SP1 TRANSFAC yes 21251886
chr17 47337623 47337628 SP1 TRANSFAC yes 54627080
chr17 47337623 47337630 SP1 TRANSFAC yes 21251887
chr17 47337623 47337630 SP1 TRANSFAC yes 54627081
chr17 47337623 47337632 SP1 TRANSFAC yes 21251888
chr17 47337623 47337632 SP1 TRANSFAC yes 54627082
chr17 47337654 47337659 SP1 TRANSFAC yes 21251889
chr17 47337654 47337659 SP1 TRANSFAC yes 54627083
chr17 47337660 47337679 CTCF JASPAR yes 21251890
chr17 47337660 47337679 CTCF JASPAR yes 54627084
chr17 47337666 47337672 SP1 TRANSFAC yes 21251891
chr17 47337666 47337672 SP1 TRANSFAC yes 54627085
chr17 47337681 47337692 NRF1 JASPAR yes 21251892
chr17 47337681 47337692 NRF1 JASPAR yes 54627086
chr17 47337685 47337691 NFE2 TRANSFAC yes 21251893
chr17 47337685 47337691 NFE2 TRANSFAC yes 54627087
chr17 47337694 47337699 SP1 TRANSFAC yes 21251894
chr17 47337694 47337699 SP1 TRANSFAC yes 54627088
chr17 47337697 47337711 ZIC1 JASPAR yes 21251895
chr17 47337697 47337711 ZIC1 JASPAR yes 54627089
chr17 47337697 47337712 ZIC3 JASPAR yes 21251896
chr17 47337697 47337712 ZIC4 JASPAR yes 21251897
chr17 47337697 47337712 ZIC3 JASPAR yes 54627090
chr17 47337697 47337712 ZIC4 JASPAR yes 54627091
chr17 47337734 47337747 TFAP2A JASPAR yes 21251898
chr17 47337734 47337747 TFAP2B JASPAR yes 21251899
chr17 47337734 47337747 TFAP2C JASPAR yes 21251900
chr17 47337734 47337747 TFAP2A JASPAR yes 54627092
chr17 47337734 47337747 TFAP2B JASPAR yes 54627093
chr17 47337734 47337747 TFAP2C JASPAR yes 54627094
chr17 47337754 47337765 ELF5 JASPAR yes 21251901
chr17 47337754 47337765 ELF5 JASPAR yes 54627095
chr17 47337757 47337762 ETS2 TRANSFAC yes 21251902
chr17 47337757 47337762 ETS2 TRANSFAC yes 54627096
chr17 47337798 47337806 EHF JASPAR yes 21251903
chr17 47337798 47337806 EHF JASPAR yes 54627097
chr17 47337809 47337825 GLIS1 JASPAR yes 21251904
chr17 47337809 47337825 GLIS1 JASPAR yes 54627098
chr17 47337812 47337824 TFAP2A JASPAR yes 21251905
chr17 47337812 47337824 TFAP2B JASPAR yes 21251906
chr17 47337812 47337824 TFAP2A JASPAR yes 54627099
chr17 47337812 47337824 TFAP2B JASPAR yes 54627100
chr17 47337820 47337825 SP1 TRANSFAC yes 21251907
chr17 47337820 47337825 SP1 TRANSFAC yes 54627101
chr17 47337820 47337826 SP1 TRANSFAC yes 21251908
chr17 47337820 47337826 SP1 TRANSFAC yes 54627102
chr17 47337846 47337866 RREB1 JASPAR yes 21251909
chr17 47337846 47337866 RREB1 JASPAR yes 54627103
chr17 47337853 47337873 TP53 JASPAR yes 21251910
chr17 47337853 47337873 TP53 JASPAR yes 54627104
chr17 47337861 47337878 PAX9 JASPAR yes 21251911
chr17 47337861 47337878 PAX9 JASPAR yes 54627105
chr17 47337862 47337881 PAX5 JASPAR yes 21251912
chr17 47337862 47337881 PAX5 JASPAR yes 54627106
chr17 47337873 47337885 E2F1 JASPAR yes 21251913
chr17 47337873 47337885 E2F1 JASPAR yes 54627107
chr17 47337877 47337891 CREB3L1 JASPAR yes 21251914
chr17 47337877 47337891 CREB3L1 JASPAR yes 54627108
chr17 47337878 47337890 HES7 JASPAR yes 21251915
chr17 47337878 47337890 HES7 JASPAR yes 54627109
chr17 47337898 47337918 ESR1 JASPAR yes 21251916
chr17 47337898 47337918 ESR1 JASPAR yes 54627110
chr17 47337899 47337908 TFAP2A JASPAR yes 21251917
chr17 47337899 47337908 TFAP2A JASPAR yes 54627111
chr17 47337901 47337919 ESR2 JASPAR yes 21251918
chr17 47337901 47337919 ESR2 JASPAR yes 54627112
chr17 47337902 47337920 ESR2 JASPAR yes 21251919
chr17 47337902 47337920 ESR2 JASPAR yes 54627113
chr17 47337903 47337918 ESR2 JASPAR yes 21251920
chr17 47337903 47337918 ESR2 JASPAR yes 54627114
chr17 47337912 47337925 TFAP2A JASPAR yes 21251921
chr17 47337912 47337925 TFAP2B JASPAR yes 21251922
chr17 47337912 47337925 TFAP2C JASPAR yes 21251923
chr17 47337912 47337925 TFAP2A JASPAR yes 54627115
chr17 47337912 47337925 TFAP2B JASPAR yes 54627116
chr17 47337912 47337925 TFAP2C JASPAR yes 54627117
chr17 47337914 47337920 SP1 TRANSFAC yes 21251924
chr17 47337914 47337920 SP1 TRANSFAC yes 54627118
SNP sites on vista25063[chr17:47337469-47337918]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47337653 rs138765259 T G
POLR2A
4914980
chr17 47337664 rs371989990 C T
CTCF POLR2A
4914981
chr17 47337712 rs202048654 C T
POLR2A ZIC3 ZIC4
4914982
chr17 47337742 rs9895214 C T
POLR2A TFAP2A TFAP2B TFAP2C
4914983
Genes possibly regulated by vista25063[chr17:47337469-47337918]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47280153 47287936 - GNGT2 ENSG00000167083.2 47287936 0.94 0.9 16009 50467
chr17 47287589 47300587 + ABI3 ENSG00000108798.4 47287589 0.9 0.91 16010 50120
chr17 47300724 47308128 - PHOSPHO1 ENSG00000173868.7 47308128 0.93 1.0 16011 70659
Expression level of Genes
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miRNAs possibly regulated by vista25063[chr17:47337469-47337918]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results