EnhancerDB
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  3. vista25070[chr17:47647130-47647802]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25070[chr17:47647130-47647802]
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Tissue distribution of vista25070
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Transcription factor that possibly regulate vista25070[chr17:47647130-47647802]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47647193 47647891 POLR2A UCSC Txn Factor no Conserved 108269415
chr17 47647213 47647668 E2F1 UCSC Txn Factor no Conserved 108269417
chr17 47647335 47647778 MAX UCSC Txn Factor no Conserved 108269447
chr17 47647338 47647810 MYC UCSC Txn Factor no Conserved 108269450
chr17 47647352 47647792 CTCF UCSC Txn Factor no Conserved 108269457
chr17 47647393 47647697 EGR1 UCSC Txn Factor no Conserved 108269478
chr17 47647410 47647688 SMC3 UCSC Txn Factor no Conserved 108269488
chr17 47647418 47647718 ZNF143 UCSC Txn Factor no Conserved 108269502
chr17 47647427 47647722 RUNX3 UCSC Txn Factor no Conserved 108269508
chr17 47647434 47647701 RAD21 UCSC Txn Factor no Conserved 108269513
chr17 47647144 47647161 ESR1 JASPAR yes 21252170
chr17 47647144 47647161 ESR1 JASPAR yes 54646539
chr17 47647193 47647207 GLIS2 JASPAR yes 21252171
chr17 47647193 47647207 GLIS2 JASPAR yes 54646540
chr17 47647194 47647205 E2F4 JASPAR yes 21252172
chr17 47647194 47647205 E2F6 JASPAR yes 21252173
chr17 47647194 47647205 E2F4 JASPAR yes 54646541
chr17 47647194 47647205 E2F6 JASPAR yes 54646542
chr17 47647195 47647206 E2F1 JASPAR yes 21252174
chr17 47647195 47647206 E2F1 JASPAR yes 54646543
chr17 47647218 47647229 NRF1 JASPAR yes 21252175
chr17 47647218 47647229 NRF1 JASPAR yes 54646544
chr17 47647228 47647247 PAX5 JASPAR yes 21252176
chr17 47647228 47647247 PAX5 JASPAR yes 54646545
chr17 47647231 47647236 SP1 TRANSFAC yes 21252177
chr17 47647231 47647236 SP1 TRANSFAC yes 54646546
chr17 47647245 47647260 MEF2A JASPAR yes 21252178
chr17 47647245 47647260 MEF2A JASPAR yes 54646547
chr17 47647246 47647261 MEF2C JASPAR yes 21252179
chr17 47647246 47647261 MEF2C JASPAR yes 54646548
chr17 47647247 47647259 MEF2A JASPAR yes 21252180
chr17 47647247 47647259 MEF2B JASPAR yes 21252181
chr17 47647247 47647259 MEF2D JASPAR yes 21252182
chr17 47647247 47647259 MEF2A JASPAR yes 54646549
chr17 47647247 47647259 MEF2B JASPAR yes 54646550
chr17 47647247 47647259 MEF2D JASPAR yes 54646551
chr17 47647249 47647253 YY1 TRANSFAC yes 21252183
chr17 47647249 47647253 YY1 TRANSFAC yes 54646552
chr17 47647267 47647279 HLF JASPAR yes 21252184
chr17 47647267 47647279 HLF JASPAR yes 54646553
chr17 47647269 47647280 YY2 JASPAR yes 21252185
chr17 47647269 47647280 YY2 JASPAR yes 54646554
chr17 47647270 47647282 YY1 JASPAR yes 21252186
chr17 47647270 47647282 YY1 JASPAR yes 54646555
chr17 47647273 47647279 YY1 JASPAR yes 21252187
chr17 47647273 47647279 YY1 JASPAR yes 54646556
chr17 47647290 47647294 H4TF2 TRANSFAC yes 21252188
chr17 47647290 47647294 H4TF2 TRANSFAC yes 54646557
chr17 47647292 47647310 RARA JASPAR yes 21252189
chr17 47647292 47647310 RARA JASPAR yes 54646558
chr17 47647299 47647312 NR2F1 JASPAR yes 21252190
chr17 47647299 47647312 NR2F1 JASPAR yes 54646559
chr17 47647303 47647311 CREB1 JASPAR yes 21252191
chr17 47647303 47647311 CREB1 JASPAR yes 54646560
chr17 47647307 47647317 SREBF2 JASPAR yes 21252192
chr17 47647307 47647317 SREBF2 JASPAR yes 54646561
chr17 47647307 47647318 USF1 JASPAR yes 21252193
chr17 47647307 47647318 USF2 JASPAR yes 21252194
chr17 47647307 47647318 USF1 JASPAR yes 54646562
chr17 47647307 47647318 USF2 JASPAR yes 54646563
chr17 47647316 47647328 ZBTB7A JASPAR yes 21252195
chr17 47647316 47647328 ZBTB7A JASPAR yes 54646564
chr17 47647317 47647322 SP1 TRANSFAC yes 21252196
chr17 47647317 47647322 SP1 TRANSFAC yes 54646565
chr17 47647320 47647334 PLAG1 JASPAR yes 21252197
chr17 47647320 47647334 PLAG1 JASPAR yes 54646566
chr17 47647356 47647367 FOSL2 JASPAR yes 21252198
chr17 47647356 47647367 FOSL2 JASPAR yes 54646567
chr17 47647373 47647384 YY2 JASPAR yes 21252199
chr17 47647373 47647384 YY2 JASPAR yes 54646568
chr17 47647434 47647440 ETS1 JASPAR yes 21252200
chr17 47647434 47647440 ETS1 JASPAR yes 54646569
chr17 47647477 47647482 SP1 TRANSFAC yes 21252201
chr17 47647477 47647482 SP1 TRANSFAC yes 54646570
chr17 47647486 47647491 SP1 TRANSFAC yes 21252202
chr17 47647486 47647491 SP1 TRANSFAC yes 54646571
chr17 47647486 47647492 SP1 TRANSFAC yes 21252203
chr17 47647486 47647492 SP1 TRANSFAC yes 54646572
chr17 47647489 47647494 SP1 TRANSFAC yes 21252204
chr17 47647489 47647494 SP1 TRANSFAC yes 54646573
chr17 47647513 47647525 ZBTB7A JASPAR yes 21252205
chr17 47647513 47647525 ZBTB7A JASPAR yes 54646574
chr17 47647536 47647545 HIC2 JASPAR yes 21252206
chr17 47647536 47647545 HIC2 JASPAR yes 54646575
chr17 47647537 47647556 CTCF JASPAR yes 21252207
chr17 47647537 47647556 CTCF JASPAR yes 54646576
chr17 47647538 47647553 ZIC3 JASPAR yes 21252208
chr17 47647538 47647553 ZIC4 JASPAR yes 21252209
chr17 47647538 47647553 ZIC3 JASPAR yes 54646577
chr17 47647538 47647553 ZIC4 JASPAR yes 54646578
chr17 47647539 47647553 ZIC1 JASPAR yes 21252210
chr17 47647539 47647553 ZIC1 JASPAR yes 54646579
chr17 47647542 47647552 FIGLA JASPAR yes 21252211
chr17 47647542 47647552 FIGLA JASPAR yes 54646580
chr17 47647556 47647564 CREB1 JASPAR yes 21252212
chr17 47647556 47647564 CREB1 JASPAR yes 54646581
chr17 47647578 47647597 PAX5 JASPAR yes 21252213
chr17 47647578 47647597 PAX5 JASPAR yes 54646582
chr17 47647602 47647616 GLIS2 JASPAR yes 21252214
chr17 47647602 47647616 GLIS3 JASPAR yes 21252215
chr17 47647602 47647616 ZIC1 JASPAR yes 21252216
chr17 47647602 47647616 GLIS2 JASPAR yes 54646583
chr17 47647602 47647616 GLIS3 JASPAR yes 54646584
chr17 47647602 47647616 ZIC1 JASPAR yes 54646585
chr17 47647602 47647617 ZIC3 JASPAR yes 21252217
chr17 47647602 47647617 ZIC4 JASPAR yes 21252218
chr17 47647602 47647617 ZIC3 JASPAR yes 54646586
chr17 47647602 47647617 ZIC4 JASPAR yes 54646587
chr17 47647622 47647640 ESR1 JASPAR yes 21252219
chr17 47647622 47647640 ESR1 JASPAR yes 54646588
chr17 47647639 47647643 H4TF2 TRANSFAC yes 21252220
chr17 47647639 47647643 H4TF2 TRANSFAC yes 54646589
chr17 47647648 47647657 SNAI2 JASPAR yes 21252221
chr17 47647648 47647657 SNAI2 JASPAR yes 54646590
chr17 47647648 47647658 ID4 JASPAR yes 21252222
chr17 47647648 47647658 ID4 JASPAR yes 54646591
chr17 47647651 47647668 RXRA JASPAR yes 21252223
chr17 47647651 47647668 RXRA JASPAR yes 54646592
chr17 47647654 47647666 TFAP2A JASPAR yes 21252224
chr17 47647654 47647666 TFAP2A JASPAR yes 54646593
chr17 47647663 47647667 LFA1 TRANSFAC yes 21252225
chr17 47647663 47647667 LFA1 TRANSFAC yes 54646594
chr17 47647672 47647686 TLX1 JASPAR yes 21252226
chr17 47647672 47647686 TLX1 JASPAR yes 54646595
chr17 47647680 47647700 ESR1 JASPAR yes 21252227
chr17 47647680 47647700 ESR1 JASPAR yes 54646596
chr17 47647681 47647693 PKNOX1 JASPAR yes 21252228
chr17 47647681 47647693 PKNOX2 JASPAR yes 21252229
chr17 47647681 47647693 TGIF1 JASPAR yes 21252230
chr17 47647681 47647693 PKNOX1 JASPAR yes 54646597
chr17 47647681 47647693 PKNOX2 JASPAR yes 54646598
chr17 47647681 47647693 TGIF1 JASPAR yes 54646599
chr17 47647682 47647692 ID4 JASPAR yes 21252231
chr17 47647682 47647692 ID4 JASPAR yes 54646600
chr17 47647683 47647701 ESR1 JASPAR yes 21252232
chr17 47647683 47647701 ESR1 JASPAR yes 54646601
chr17 47647693 47647707 TLX1 JASPAR yes 21252233
chr17 47647693 47647707 TLX1 JASPAR yes 54646602
chr17 47647694 47647708 TLX1 JASPAR yes 21252234
chr17 47647694 47647708 TLX1 JASPAR yes 54646603
chr17 47647696 47647715 REST JASPAR yes 21252235
chr17 47647696 47647715 REST JASPAR yes 54646604
chr17 47647703 47647713 ID4 JASPAR yes 21252236
chr17 47647703 47647713 TCF4 JASPAR yes 21252237
chr17 47647703 47647713 ID4 JASPAR yes 54646605
chr17 47647703 47647713 TCF4 JASPAR yes 54646606
chr17 47647742 47647763 ZNF263 JASPAR yes 21252238
chr17 47647742 47647763 ZNF263 JASPAR yes 54646607
chr17 47647745 47647766 ZNF263 JASPAR yes 21252239
chr17 47647745 47647766 ZNF263 JASPAR yes 54646608
chr17 47647756 47647766 TBR1 JASPAR yes 21252240
chr17 47647756 47647766 TBR1 JASPAR yes 54646609
chr17 47647756 47647767 TBX20 JASPAR yes 21252241
chr17 47647756 47647767 TBX2 JASPAR yes 21252242
chr17 47647756 47647767 TBX20 JASPAR yes 54646610
chr17 47647756 47647767 TBX2 JASPAR yes 54646611
chr17 47647757 47647767 TBX21 JASPAR yes 21252243
chr17 47647757 47647767 TBX21 JASPAR yes 54646612
SNP sites on vista25070[chr17:47647130-47647802]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47647133 rs139525657 A G no 4916890
chr17 47647191 rs144269161 C T no 4916891
chr17 47647225 rs147773180 C T
E2F1 NRF1 POLR2A
4916892
chr17 47647226 rs141071974 G T
E2F1 NRF1 POLR2A
4916893
chr17 47647296 rs377741420 C T
E2F1 POLR2A RARA
4916894
chr17 47647314 rs191708158 T C
E2F1 POLR2A SREBF2 USF1 USF2
4916895
chr17 47647467 rs370894500 G C
CTCF E2F1 EGR1 MAX MYC POLR2A RAD21 RUNX3 SMC3 ZNF143
4916896
chr17 47647776 rs112147932 C A
CTCF MAX MYC POLR2A
4916897
Genes possibly regulated by vista25070[chr17:47647130-47647802]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47572655 47592379 + NGFR ENSG00000064300.4 47572655 0.82 1.0 16015 25525
chr17 47653220 47661189 + NXPH3 ENSG00000182575.7 47653220 0.92 0.88 16016 94582
Expression level of Genes
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miRNAs possibly regulated by vista25070[chr17:47647130-47647802]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results