EnhancerDB
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  3. vista25077[chr17:47838770-47839156]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25077[chr17:47838770-47839156]
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Tissue distribution of vista25077
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Transcription factor that possibly regulate vista25077[chr17:47838770-47839156]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47838776 47838780 TEAD2 TRANSFAC yes 15442
chr17 47838776 47838780 TEAD2 TRANSFAC yes 21252603
chr17 47838795 47838804 CDX1 JASPAR yes 15443
chr17 47838795 47838804 CDX1 JASPAR yes 21252604
chr17 47838795 47838806 CDX2 JASPAR yes 15444
chr17 47838795 47838806 CDX2 JASPAR yes 21252605
chr17 47838808 47838818 TFEC JASPAR yes 15445
chr17 47838808 47838818 TFEC JASPAR yes 21252606
chr17 47838811 47838824 SMAD2 JASPAR yes 15446
chr17 47838811 47838824 SMAD2 JASPAR yes 21252607
chr17 47838832 47838849 BCL6B JASPAR yes 15447
chr17 47838832 47838849 BCL6B JASPAR yes 21252608
chr17 47838838 47838842 NFE TRANSFAC yes 15448
chr17 47838838 47838842 NFE TRANSFAC yes 21252609
chr17 47838838 47838843 GATA1 TRANSFAC yes 15449
chr17 47838838 47838843 GATA1 TRANSFAC yes 21252610
chr17 47838838 47838844 GATA3 JASPAR yes 15450
chr17 47838838 47838844 GATA3 JASPAR yes 21252611
chr17 47838846 47838849 MYB TRANSFAC yes 15451
chr17 47838846 47838849 MYB TRANSFAC yes 21252612
chr17 47838846 47838857 PROP1 JASPAR yes 15452
chr17 47838846 47838857 PROP1 JASPAR yes 21252613
chr17 47838851 47838855 YY1 TRANSFAC yes 15453
chr17 47838851 47838855 YY1 TRANSFAC yes 21252614
chr17 47838879 47838884 GATA2 JASPAR yes 15454
chr17 47838879 47838884 GATA2 JASPAR yes 21252615
chr17 47838880 47838886 ZNF354C JASPAR yes 15455
chr17 47838880 47838886 ZNF354C JASPAR yes 21252616
chr17 47838885 47838898 JUN JASPAR yes 15456
chr17 47838885 47838898 JUN JASPAR yes 21252617
chr17 47838913 47838920 SPI1 JASPAR yes 15457
chr17 47838913 47838920 SPI1 JASPAR yes 21252618
chr17 47838913 47838921 EHF JASPAR yes 15458
chr17 47838913 47838921 EHF JASPAR yes 21252619
chr17 47838921 47838936 RUNX2 JASPAR yes 15459
chr17 47838921 47838936 RUNX2 JASPAR yes 21252620
chr17 47838966 47838976 TEAD4 JASPAR yes 15460
chr17 47838966 47838976 TEAD4 JASPAR yes 21252621
chr17 47838966 47838978 TEAD1 JASPAR yes 15461
chr17 47838966 47838978 TEAD1 JASPAR yes 21252622
chr17 47838967 47838975 TEAD3 JASPAR yes 15462
chr17 47838967 47838975 TEAD3 JASPAR yes 21252623
chr17 47838983 47838989 NFIC JASPAR yes 15463
chr17 47838983 47838989 NFIC JASPAR yes 21252624
chr17 47838985 47838989 H1TF2 TRANSFAC yes 15464
chr17 47838985 47838989 NFE TRANSFAC yes 15465
chr17 47838985 47838989 SRF TRANSFAC yes 15466
chr17 47838985 47838989 H1TF2 TRANSFAC yes 21252625
chr17 47838985 47838989 NFE TRANSFAC yes 21252626
chr17 47838985 47838989 SRF TRANSFAC yes 21252627
chr17 47838989 47838995 MYC TRANSFAC yes 15467
chr17 47838989 47838995 MYC TRANSFAC yes 21252628
chr17 47838998 47839008 HOXC10 JASPAR yes 15468
chr17 47838998 47839008 HOXC10 JASPAR yes 21252629
chr17 47838998 47839009 HOXA10 JASPAR yes 15469
chr17 47838998 47839009 HOXC11 JASPAR yes 15470
chr17 47838998 47839009 HOXC12 JASPAR yes 15471
chr17 47838998 47839009 HOXD12 JASPAR yes 15472
chr17 47838998 47839009 HOXA10 JASPAR yes 21252630
chr17 47838998 47839009 HOXC11 JASPAR yes 21252631
chr17 47838998 47839009 HOXC12 JASPAR yes 21252632
chr17 47838998 47839009 HOXD12 JASPAR yes 21252633
chr17 47838999 47839008 CDX1 JASPAR yes 15473
chr17 47838999 47839008 CDX1 JASPAR yes 21252634
chr17 47838999 47839010 CDX2 JASPAR yes 15474
chr17 47838999 47839010 CDX2 JASPAR yes 21252635
chr17 47839012 47839023 NFKB1 JASPAR yes 15475
chr17 47839012 47839023 NFKB1 JASPAR yes 21252636
chr17 47839013 47839028 STAT2 JASPAR yes 15476
chr17 47839013 47839028 STAT2 JASPAR yes 21252637
chr17 47839014 47839028 STAT1 JASPAR yes 15477
chr17 47839014 47839028 STAT1 JASPAR yes 21252638
chr17 47839017 47839032 LEF1 JASPAR yes 15478
chr17 47839017 47839032 LEF1 JASPAR yes 21252639
chr17 47839018 47839023 ETS2 TRANSFAC yes 15479
chr17 47839018 47839023 ETS2 TRANSFAC yes 21252640
chr17 47839018 47839032 TCF7L2 JASPAR yes 15480
chr17 47839018 47839032 TCF7L2 JASPAR yes 21252641
chr17 47839025 47839030 GATA2 JASPAR yes 15481
chr17 47839025 47839030 GATA2 JASPAR yes 21252642
chr17 47839041 47839045 NFE TRANSFAC yes 15482
chr17 47839041 47839045 NFE TRANSFAC yes 21252643
chr17 47839059 47839074 HSF1 JASPAR yes 15483
chr17 47839059 47839074 HSF1 JASPAR yes 21252644
chr17 47839064 47839074 REL JASPAR yes 15484
chr17 47839064 47839074 REL JASPAR yes 21252645
chr17 47839080 47839085 ETS2 TRANSFAC yes 15485
chr17 47839080 47839085 ETS2 TRANSFAC yes 21252646
chr17 47839084 47839094 NFATC3 JASPAR yes 15486
chr17 47839084 47839094 NFATC3 JASPAR yes 21252647
chr17 47839116 47839128 POU3F1 JASPAR yes 15487
chr17 47839116 47839128 POU3F1 JASPAR yes 21252648
chr17 47839116 47839129 POU3F3 JASPAR yes 15488
chr17 47839116 47839129 POU3F3 JASPAR yes 21252649
chr17 47839120 47839123 MYB TRANSFAC yes 15489
chr17 47839120 47839123 MYB TRANSFAC yes 21252650
chr17 47839125 47839129 TEAD2 TRANSFAC yes 15490
chr17 47839125 47839129 TEAD2 TRANSFAC yes 21252651
chr17 47839125 47839130 TBP TRANSFAC yes 15491
chr17 47839125 47839130 TBP TRANSFAC yes 21252652
chr17 47839125 47839131 TFIID TRANSFAC yes 15492
chr17 47839125 47839131 TFIID TRANSFAC yes 21252653
chr17 47839145 47839166 REST JASPAR yes 15493
chr17 47839145 47839166 REST JASPAR yes 21252654
chr17 47839147 47839162 HNF4A JASPAR yes 15494
chr17 47839147 47839162 HNF4A JASPAR yes 21252655
SNP sites on vista25077[chr17:47838770-47839156]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47838918 rs117175407 C T
EHF SPI1
4917873
chr17 47839099 rs542707463 G A no 4917874
chr17 47839126 rs145651057 T A,C
POU3F1 POU3F3 TBP TEAD2 TFIID
4917875
Genes possibly regulated by vista25077[chr17:47838770-47839156]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47676246 47755596 - SPOP ENSG00000121067.13 47755596 0.7 0.99 16017 16826
chr17 47778305 47786376 - SLC35B1 ENSG00000121073.9 47786376 0.69 1.0 16018 47606
chr17 47787694 47866542 - FAM117A ENSG00000121104.3 47866542 0.69 1.0 16019 72614
chr17 47865917 47906458 + KAT7 ENSG00000136504.7 47865917 0.59 1.0 16020 73239
chr17 47915671 47925379 - TAC4 ENSG00000176358.11 47925379 0.71 1.0 16021 13777
Expression level of Genes
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miRNAs possibly regulated by vista25077[chr17:47838770-47839156]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results