EnhancerDB
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  3. vista25078[chr17:47857403-47857727]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25078[chr17:47857403-47857727]
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Tissue distribution of vista25078
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Transcription factor that possibly regulate vista25078[chr17:47857403-47857727]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47856807 47857479 GATA1 UCSC Txn Factor no Conserved 108269708
chr17 47857039 47857652 CTCF UCSC Txn Factor no Conserved 108269709
chr17 47857409 47857424 TP53 JASPAR yes 21252656
chr17 47857409 47857424 TP53 JASPAR yes 54661152
chr17 47857424 47857439 MEF2C JASPAR yes 21252657
chr17 47857424 47857439 MEF2C JASPAR yes 54661153
chr17 47857424 47857442 SRF JASPAR yes 21252658
chr17 47857424 47857442 SRF JASPAR yes 54661154
chr17 47857425 47857440 MEF2A JASPAR yes 21252659
chr17 47857425 47857440 MEF2A JASPAR yes 54661155
chr17 47857426 47857438 MEF2B JASPAR yes 21252660
chr17 47857426 47857438 MEF2B JASPAR yes 54661156
chr17 47857427 47857437 MEF2A JASPAR yes 21252661
chr17 47857427 47857437 MEF2A JASPAR yes 54661157
chr17 47857431 47857446 PRDM1 JASPAR yes 21252662
chr17 47857431 47857446 PRDM1 JASPAR yes 54661158
chr17 47857464 47857474 MZF1 JASPAR yes 21252663
chr17 47857464 47857474 MZF1 JASPAR yes 54661159
chr17 47857464 47857480 GLIS1 JASPAR yes 21252664
chr17 47857464 47857480 GLIS1 JASPAR yes 54661160
chr17 47857466 47857484 NFYA JASPAR yes 21252665
chr17 47857466 47857484 NFYA JASPAR yes 54661161
chr17 47857467 47857473 SP1 TRANSFAC yes 21252666
chr17 47857467 47857473 SP1 TRANSFAC yes 54661162
chr17 47857467 47857477 SP1 JASPAR yes 21252667
chr17 47857467 47857477 SP1 JASPAR yes 54661163
chr17 47857469 47857485 NFYA JASPAR yes 21252668
chr17 47857469 47857485 NFYA JASPAR yes 54661164
chr17 47857472 47857487 NFYB JASPAR yes 21252669
chr17 47857472 47857487 NFYB JASPAR yes 54661165
chr17 47857478 47857482 ESR1 TRANSFAC yes 21252670
chr17 47857478 47857482 ESR1 TRANSFAC yes 54661166
chr17 47857481 47857486 MYC TRANSFAC yes 21252671
chr17 47857481 47857486 MYC TRANSFAC yes 54661167
chr17 47857485 47857496 BATF JASPAR yes 21252672
chr17 47857485 47857496 BATF JASPAR yes 54661168
chr17 47857489 47857501 FOXI1 JASPAR yes 21252673
chr17 47857489 47857501 SRF JASPAR yes 21252674
chr17 47857489 47857501 FOXI1 JASPAR yes 54661169
chr17 47857489 47857501 SRF JASPAR yes 54661170
chr17 47857492 47857496 YY1 TRANSFAC yes 21252675
chr17 47857492 47857496 YY1 TRANSFAC yes 54661171
chr17 47857519 47857524 NFY TRANSFAC yes 21252676
chr17 47857519 47857524 NFY TRANSFAC yes 54661172
chr17 47857521 47857532 FOXA1 JASPAR yes 21252677
chr17 47857521 47857532 FOXA1 JASPAR yes 54661173
chr17 47857521 47857536 FOXA1 JASPAR yes 21252678
chr17 47857521 47857536 FOXA1 JASPAR yes 54661174
chr17 47857523 47857527 LFA1 TRANSFAC yes 21252679
chr17 47857523 47857527 LFA1 TRANSFAC yes 54661175
chr17 47857534 47857538 TEAD2 TRANSFAC yes 21252680
chr17 47857534 47857538 TEAD2 TRANSFAC yes 54661176
chr17 47857534 47857539 TBP TRANSFAC yes 21252681
chr17 47857534 47857539 TBP TRANSFAC yes 54661177
chr17 47857534 47857540 TMF TRANSFAC yes 21252682
chr17 47857534 47857540 TMF TRANSFAC yes 54661178
chr17 47857534 47857548 JUN JASPAR yes 21252683
chr17 47857534 47857548 JUN JASPAR yes 54661179
chr17 47857536 47857547 BATF JASPAR yes 21252684
chr17 47857536 47857547 BATF JASPAR yes 54661180
chr17 47857537 47857548 FOSL2 JASPAR yes 21252685
chr17 47857537 47857548 JUNB JASPAR yes 21252686
chr17 47857537 47857548 FOSL2 JASPAR yes 54661181
chr17 47857537 47857548 JUNB JASPAR yes 54661182
chr17 47857538 47857549 FOS JASPAR yes 21252687
chr17 47857538 47857549 FOSL1 JASPAR yes 21252688
chr17 47857538 47857549 JUND JASPAR yes 21252689
chr17 47857538 47857549 FOS JASPAR yes 54661183
chr17 47857538 47857549 FOSL1 JASPAR yes 54661184
chr17 47857538 47857549 JUND JASPAR yes 54661185
chr17 47857539 47857548 JDP2 JASPAR yes 21252690
chr17 47857539 47857548 JDP2 JASPAR yes 54661186
chr17 47857546 47857553 SPIB JASPAR yes 21252691
chr17 47857546 47857553 SPIB JASPAR yes 54661187
chr17 47857589 47857601 FOXI1 JASPAR yes 21252692
chr17 47857589 47857601 FOXI1 JASPAR yes 54661188
chr17 47857592 47857602 HOXB13 JASPAR yes 21252693
chr17 47857592 47857602 HOXB13 JASPAR yes 54661189
chr17 47857608 47857612 YY1 TRANSFAC yes 21252694
chr17 47857608 47857612 YY1 TRANSFAC yes 54661190
chr17 47857627 47857638 NFE2L2 JASPAR yes 21252695
chr17 47857627 47857638 NFE2L2 JASPAR yes 54661191
chr17 47857629 47857643 STAT1 JASPAR yes 21252696
chr17 47857629 47857643 STAT1 JASPAR yes 54661192
chr17 47857630 47857642 IRF1 JASPAR yes 21252697
chr17 47857630 47857642 IRF1 JASPAR yes 54661193
chr17 47857635 47857639 YY1 TRANSFAC yes 21252698
chr17 47857635 47857639 YY1 TRANSFAC yes 54661194
chr17 47857643 47857648 GATA2 JASPAR yes 21252699
chr17 47857643 47857648 GATA2 JASPAR yes 54661195
chr17 47857686 47857697 ESRRA JASPAR yes 21252700
chr17 47857686 47857697 ESRRA JASPAR yes 54661196
chr17 47857690 47857694 ESR1 TRANSFAC yes 21252701
chr17 47857690 47857694 ESR1 TRANSFAC yes 54661197
SNP sites on vista25078[chr17:47857403-47857727]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47857422 rs7211603 A G
CTCF GATA1 TP53
4917951
chr17 47857459 rs149966248 T A
CTCF GATA1
4917952
chr17 47857536 rs367584120 A T
BATF CTCF FOXA1 JUN TBP TEAD2 TMF
4917953
chr17 47857542 rs187038747 G A
BATF CTCF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND
4917954
chr17 47857609 rs191430250 C T
CTCF YY1
4917955
chr17 47857694 rs144587554 CA C
ESR1 ESRRA
4917956
Genes possibly regulated by vista25078[chr17:47857403-47857727]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47778305 47786376 - SLC35B1 ENSG00000121073.9 47786376 0.69 1.0 16018 28973
chr17 47787694 47866542 - FAM117A ENSG00000121104.3 47866542 0.69 1.0 16019 91185
chr17 47865917 47906458 + KAT7 ENSG00000136504.7 47865917 0.59 1.0 16020 91810
chr17 47915671 47925379 - TAC4 ENSG00000176358.11 47925379 0.71 1.0 16021 32348
Expression level of Genes
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miRNAs possibly regulated by vista25078[chr17:47857403-47857727]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results