EnhancerDB
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  3. vista25080[chr17:47913501-47913854]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25080[chr17:47913501-47913854]
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Tissue distribution of vista25080
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Transcription factor that possibly regulate vista25080[chr17:47913501-47913854]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47913761 47914050 NR3C1 UCSC Txn Factor no Conserved 108269732
chr17 47913528 47913531 MYB TRANSFAC yes 21252733
chr17 47913531 47913543 PROX1 JASPAR yes 21252734
chr17 47913543 47913556 ELF1 JASPAR yes 21252735
chr17 47913545 47913556 ETV2 JASPAR yes 21252736
chr17 47913546 47913556 ERF JASPAR yes 21252737
chr17 47913546 47913556 ERG JASPAR yes 21252738
chr17 47913546 47913556 ETS1 JASPAR yes 21252739
chr17 47913546 47913556 FEV JASPAR yes 21252740
chr17 47913546 47913556 FLI1 JASPAR yes 21252741
chr17 47913546 47913557 FLI1 JASPAR yes 21252742
chr17 47913547 47913555 FEV JASPAR yes 21252743
chr17 47913569 47913588 REST JASPAR yes 21252744
chr17 47913570 47913587 BCL6B JASPAR yes 21252745
chr17 47913571 47913585 EBF1 JASPAR yes 21252746
chr17 47913572 47913583 EBF1 JASPAR yes 21252747
chr17 47913586 47913596 TFEC JASPAR yes 21252748
chr17 47913590 47913599 NFIX JASPAR yes 21252749
chr17 47913590 47913600 NFIA JASPAR yes 21252750
chr17 47913592 47913598 NFIC JASPAR yes 21252751
chr17 47913601 47913610 SOX9 JASPAR yes 21252752
chr17 47913617 47913621 LFA1 TRANSFAC yes 21252753
chr17 47913626 47913630 TEAD2 TRANSFAC yes 21252754
chr17 47913675 47913689 ONECUT2 JASPAR yes 21252755
chr17 47913675 47913689 ONECUT3 JASPAR yes 21252756
chr17 47913675 47913690 HNF1A JASPAR yes 21252757
chr17 47913676 47913688 HNF1B JASPAR yes 21252758
chr17 47913676 47913689 HNF1B JASPAR yes 21252759
chr17 47913676 47913690 POU4F1 JASPAR yes 21252760
chr17 47913676 47913692 POU4F2 JASPAR yes 21252761
chr17 47913676 47913692 POU4F3 JASPAR yes 21252762
chr17 47913681 47913691 PAX7 JASPAR yes 21252763
chr17 47913682 47913686 YY1 TRANSFAC yes 21252764
chr17 47913683 47913693 MNX1 JASPAR yes 21252765
chr17 47913683 47913693 POU6F1 JASPAR yes 21252766
chr17 47913684 47913692 LMX1A JASPAR yes 21252767
chr17 47913684 47913692 LMX1B JASPAR yes 21252768
chr17 47913684 47913692 NKX6-1 JASPAR yes 21252769
chr17 47913684 47913692 NKX6-2 JASPAR yes 21252770
chr17 47913684 47913692 VAX1 JASPAR yes 21252771
chr17 47913684 47913692 VAX2 JASPAR yes 21252772
chr17 47913684 47913692 VSX1 JASPAR yes 21252773
chr17 47913684 47913692 VSX2 JASPAR yes 21252774
chr17 47913689 47913693 TEAD2 TRANSFAC yes 21252775
chr17 47913691 47913694 MYB TRANSFAC yes 21252776
chr17 47913692 47913704 FOXC2 JASPAR yes 21252777
chr17 47913692 47913707 SOX21 JASPAR yes 21252778
chr17 47913701 47913712 DMRT3 JASPAR yes 21252779
chr17 47913705 47913708 MYB TRANSFAC yes 21252780
chr17 47913707 47913721 SPI1 JASPAR yes 21252781
chr17 47913708 47913721 ELF1 JASPAR yes 21252782
chr17 47913709 47913721 EHF JASPAR yes 21252783
chr17 47913709 47913721 ELF1 JASPAR yes 21252784
chr17 47913709 47913721 ELF4 JASPAR yes 21252785
chr17 47913710 47913721 ELF5 JASPAR yes 21252786
chr17 47913710 47913721 ETV2 JASPAR yes 21252787
chr17 47913711 47913721 ELK1 JASPAR yes 21252788
chr17 47913711 47913721 ELK3 JASPAR yes 21252789
chr17 47913711 47913721 ERF JASPAR yes 21252790
chr17 47913711 47913721 ERG JASPAR yes 21252791
chr17 47913711 47913721 ETS1 JASPAR yes 21252792
chr17 47913711 47913721 ETV1 JASPAR yes 21252793
chr17 47913711 47913721 ETV3 JASPAR yes 21252794
chr17 47913711 47913721 ETV4 JASPAR yes 21252795
chr17 47913711 47913721 ETV6 JASPAR yes 21252796
chr17 47913711 47913721 FEV JASPAR yes 21252797
chr17 47913711 47913721 FLI1 JASPAR yes 21252798
chr17 47913711 47913721 GABPA JASPAR yes 21252799
chr17 47913711 47913722 ELK4 JASPAR yes 21252800
chr17 47913711 47913722 FLI1 JASPAR yes 21252801
chr17 47913712 47913720 EHF JASPAR yes 21252802
chr17 47913712 47913720 FEV JASPAR yes 21252803
chr17 47913713 47913720 SPI1 JASPAR yes 21252804
chr17 47913713 47913731 MAFF JASPAR yes 21252805
chr17 47913715 47913730 MAFK JASPAR yes 21252806
chr17 47913725 47913731 TCF4 TRANSFAC yes 21252807
chr17 47913743 47913747 YY1 TRANSFAC yes 21252808
chr17 47913754 47913760 NFIC JASPAR yes 21252809
chr17 47913759 47913770 E2F6 JASPAR yes 21252810
chr17 47913788 47913795 NFATC2 JASPAR yes 21252811
chr17 47913804 47913810 HiNF-A TRANSFAC yes 21252812
chr17 47913813 47913823 NFIA JASPAR yes 21252813
chr17 47913815 47913821 NFIC JASPAR yes 21252814
chr17 47913838 47913848 NFATC3 JASPAR yes 21252815
SNP sites on vista25080[chr17:47913501-47913854]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47913511 rs10853112 G T no 4918111
chr17 47913579 rs184871900 A G
BCL6B EBF1 REST
4918112
chr17 47913590 rs551146797 A G
NFIA NFIX TFEC
4918113
chr17 47913642 rs151193493 T G no 4918114
chr17 47913654 rs189330205 C T no 4918115
chr17 47913773 rs192663464 C G,T
NR3C1
4918116
chr17 47913821 rs116902280 A G
NFIA NFIC NR3C1
4918117
Genes possibly regulated by vista25080[chr17:47913501-47913854]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47787694 47866542 - FAM117A ENSG00000121104.3 47866542 0.69 1.0 16019 53041
chr17 47865917 47906458 + KAT7 ENSG00000136504.7 47865917 0.59 1.0 16020 52416
chr17 47915671 47925379 - TAC4 ENSG00000176358.11 47925379 0.71 1.0 16021 88475
Expression level of Genes
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miRNAs possibly regulated by vista25080[chr17:47913501-47913854]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results