EnhancerDB
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  3. vista25088[chr17:47972520-47972640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25088[chr17:47972520-47972640]
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Tissue distribution of vista25088
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Transcription factor that possibly regulate vista25088[chr17:47972520-47972640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 47972506 47972524 ESR1 JASPAR yes 21253110
chr17 47972506 47972524 ESR1 JASPAR yes 54666817
chr17 47972536 47972557 ZNF263 JASPAR yes 21253111
chr17 47972536 47972557 ZNF263 JASPAR yes 54666819
chr17 47972537 47972558 ZNF263 JASPAR yes 21253112
chr17 47972537 47972558 ZNF263 JASPAR yes 54666820
chr17 47972542 47972557 NR2C2 JASPAR yes 21253113
chr17 47972542 47972557 NR2C2 JASPAR yes 54666821
chr17 47972542 47972563 ZNF263 JASPAR yes 21253114
chr17 47972542 47972563 ZNF263 JASPAR yes 54666822
chr17 47972544 47972552 TBX15 JASPAR yes 21253115
chr17 47972544 47972552 TBX15 JASPAR yes 54666823
chr17 47972544 47972555 E2F6 JASPAR yes 21253116
chr17 47972544 47972555 E2F6 JASPAR yes 54666824
chr17 47972545 47972550 SP1 TRANSFAC yes 21253117
chr17 47972545 47972550 SP1 TRANSFAC yes 54666825
chr17 47972546 47972556 SP1 JASPAR yes 21253118
chr17 47972546 47972556 ZNF740 JASPAR yes 21253119
chr17 47972546 47972556 SP1 JASPAR yes 54666826
chr17 47972546 47972556 ZNF740 JASPAR yes 54666827
chr17 47972546 47972566 RREB1 JASPAR yes 21253120
chr17 47972546 47972566 RREB1 JASPAR yes 54666828
chr17 47972548 47972554 MAZ TRANSFAC yes 21253121
chr17 47972548 47972554 MAZ TRANSFAC yes 54666829
chr17 47972553 47972559 MAZ TRANSFAC yes 21253122
chr17 47972553 47972559 MAZ TRANSFAC yes 54666830
chr17 47972582 47972587 SP1 TRANSFAC yes 21253123
chr17 47972582 47972587 SP1 TRANSFAC yes 54666831
chr17 47972600 47972612 TEAD1 JASPAR yes 21253124
chr17 47972600 47972612 TEAD1 JASPAR yes 54666832
chr17 47972610 47972630 TP53 JASPAR yes 21253125
chr17 47972610 47972630 TP53 JASPAR yes 54666833
chr17 47972611 47972626 HSF1 JASPAR yes 21253126
chr17 47972611 47972626 HSF1 JASPAR yes 54666834
SNP sites on vista25088[chr17:47972520-47972640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 47972567 rs187103582 C T no 4918730
chr17 47972568 rs190105748 G A no 4918731
chr17 47972575 rs78517426 C T no 4918732
chr17 47972576 rs56186336 G A no 4918733
chr17 47972617 rs182367492 C T
HSF1 TP53
4918734
Genes possibly regulated by vista25088[chr17:47972520-47972640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 47915671 47925379 - TAC4 ENSG00000176358.11 47925379 0.71 1.0 16021 52859
chr17 48046334 48052321 + DLX4 ENSG00000108813.9 48046334 0.81 1.0 16022 26306
chr17 48067369 48072588 - DLX3 ENSG00000064195.7 48072588 0.9 0.93 16023 52
Expression level of Genes
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miRNAs possibly regulated by vista25088[chr17:47972520-47972640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results