EnhancerDB
  1. Home
  2. Enhancers
  3. vista2509[chr1:94216472-94216879]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2509[chr1:94216472-94216879]
Back to top
Tissue distribution of vista2509
Back to top
Transcription factor that possibly regulate vista2509[chr1:94216472-94216879]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 94216499 94216505 TBP TRANSFAC yes 30831502
chr1 94216499 94216505 TBP TRANSFAC yes 118331171
chr1 94216511 94216521 REL JASPAR yes 30831503
chr1 94216511 94216521 REL JASPAR yes 118331172
chr1 94216529 94216537 HOXA5 JASPAR yes 30831504
chr1 94216529 94216537 HOXA5 JASPAR yes 118331173
chr1 94216551 94216557 YY1 JASPAR yes 30831505
chr1 94216551 94216557 YY1 JASPAR yes 118331174
chr1 94216575 94216595 PPARG JASPAR yes 30831506
chr1 94216575 94216595 PPARG JASPAR yes 118331175
chr1 94216578 94216587 SRY JASPAR yes 30831507
chr1 94216578 94216587 SRY JASPAR yes 118331176
chr1 94216580 94216583 MYB TRANSFAC yes 30831508
chr1 94216580 94216583 MYB TRANSFAC yes 118331177
chr1 94216581 94216597 SOX4 JASPAR yes 30831509
chr1 94216581 94216597 SOX8 JASPAR yes 30831510
chr1 94216581 94216597 SOX4 JASPAR yes 118331178
chr1 94216581 94216597 SOX8 JASPAR yes 118331179
chr1 94216584 94216600 RFX2 JASPAR yes 30831511
chr1 94216584 94216600 RFX3 JASPAR yes 30831512
chr1 94216584 94216600 RFX4 JASPAR yes 30831513
chr1 94216584 94216600 RFX5 JASPAR yes 30831514
chr1 94216584 94216600 RFX2 JASPAR yes 118331180
chr1 94216584 94216600 RFX3 JASPAR yes 118331181
chr1 94216584 94216600 RFX4 JASPAR yes 118331182
chr1 94216584 94216600 RFX5 JASPAR yes 118331183
chr1 94216585 94216604 RFX2 JASPAR yes 30831515
chr1 94216585 94216604 RFX2 JASPAR yes 118331184
chr1 94216587 94216602 RFX5 JASPAR yes 30831516
chr1 94216587 94216602 RFX5 JASPAR yes 118331185
chr1 94216593 94216603 HMBOX1 JASPAR yes 30831517
chr1 94216593 94216603 HMBOX1 JASPAR yes 118331186
chr1 94216595 94216598 MYB TRANSFAC yes 30831518
chr1 94216595 94216598 MYB TRANSFAC yes 118331187
chr1 94216598 94216618 RREB1 JASPAR yes 30831519
chr1 94216598 94216618 RREB1 JASPAR yes 118331188
chr1 94216615 94216620 SP1 TRANSFAC yes 30831520
chr1 94216615 94216620 SP1 TRANSFAC yes 118331189
chr1 94216672 94216685 ELF1 JASPAR yes 30831521
chr1 94216672 94216685 ELF1 JASPAR yes 118331190
chr1 94216675 94216681 PEA3 TRANSFAC yes 30831522
chr1 94216675 94216681 PEA3 TRANSFAC yes 118331191
chr1 94216675 94216686 FLI1 JASPAR yes 30831523
chr1 94216675 94216686 FLI1 JASPAR yes 118331192
chr1 94216676 94216684 EHF JASPAR yes 30831524
chr1 94216676 94216684 EHF JASPAR yes 118331193
chr1 94216677 94216684 SPI1 JASPAR yes 30831525
chr1 94216677 94216684 SPI1 JASPAR yes 118331194
chr1 94216678 94216693 MAFK JASPAR yes 30831526
chr1 94216678 94216693 MAFK JASPAR yes 118331195
chr1 94216682 94216693 NRL JASPAR yes 30831527
chr1 94216682 94216693 NRL JASPAR yes 118331196
chr1 94216686 94216701 PRDM1 JASPAR yes 30831528
chr1 94216686 94216701 PRDM1 JASPAR yes 118331197
chr1 94216687 94216691 YY1 TRANSFAC yes 30831529
chr1 94216687 94216691 YY1 TRANSFAC yes 118331198
chr1 94216729 94216732 MYB TRANSFAC yes 30831530
chr1 94216729 94216732 MYB TRANSFAC yes 118331199
chr1 94216736 94216757 REST JASPAR yes 30831531
chr1 94216736 94216757 REST JASPAR yes 118331200
chr1 94216746 94216751 TFAP2A TRANSFAC yes 30831532
chr1 94216746 94216751 TFAP2A TRANSFAC yes 118331201
chr1 94216746 94216752 MZF1 JASPAR yes 30831533
chr1 94216746 94216752 MZF1 JASPAR yes 118331202
chr1 94216746 94216759 ELF1 JASPAR yes 30831534
chr1 94216746 94216759 ELF1 JASPAR yes 118331203
chr1 94216746 94216767 ZNF263 JASPAR yes 30831535
chr1 94216746 94216767 ZNF263 JASPAR yes 118331204
chr1 94216749 94216755 PEA3 TRANSFAC yes 30831536
chr1 94216749 94216755 PEA3 TRANSFAC yes 118331205
chr1 94216749 94216759 ETV6 JASPAR yes 30831537
chr1 94216749 94216759 ETV6 JASPAR yes 118331206
chr1 94216749 94216760 ELK4 JASPAR yes 30831538
chr1 94216749 94216760 FLI1 JASPAR yes 30831539
chr1 94216749 94216760 ELK4 JASPAR yes 118331207
chr1 94216749 94216760 FLI1 JASPAR yes 118331208
chr1 94216750 94216758 EHF JASPAR yes 30831540
chr1 94216750 94216758 EHF JASPAR yes 118331209
chr1 94216751 94216758 SPI1 JASPAR yes 30831541
chr1 94216751 94216758 SPI1 JASPAR yes 118331210
chr1 94216790 94216793 MYB TRANSFAC yes 30831542
chr1 94216790 94216793 MYB TRANSFAC yes 118331211
chr1 94216794 94216800 TCF4 TRANSFAC yes 30831543
chr1 94216794 94216800 TCF4 TRANSFAC yes 118331212
chr1 94216840 94216848 MEIS3 JASPAR yes 30831544
chr1 94216840 94216848 MEIS3 JASPAR yes 118331213
chr1 94216843 94216853 GABPA JASPAR yes 30831545
chr1 94216843 94216853 GABPA JASPAR yes 118331214
chr1 94216852 94216856 NFE TRANSFAC yes 30831546
chr1 94216852 94216856 NFE TRANSFAC yes 118331215
chr1 94216852 94216859 MEIS1 JASPAR yes 30831547
chr1 94216852 94216859 MEIS1 JASPAR yes 118331216
chr1 94216858 94216876 RARA JASPAR yes 30831548
chr1 94216858 94216876 RARA JASPAR yes 118331217
chr1 94216862 94216875 ZBTB18 JASPAR yes 30831549
chr1 94216862 94216875 ZBTB18 JASPAR yes 118331218
SNP sites on vista2509[chr1:94216472-94216879]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 94216478 rs11164977 C A no 490214
chr1 94216486 rs78877935 A C no 490215
chr1 94216539 rs115024348 T C no 490216
chr1 94216557 rs12240145 C G
YY1
490217
chr1 94216576 rs556603161 C G
PPARG
490218
chr1 94216617 rs150950620 C T
RREB1 SP1
490219
chr1 94216629 rs192608673 C T no 490220
chr1 94216660 rs76482895 C T no 490221
chr1 94216817 rs564251871 CA C no 490222
chr1 94216841 rs540891991 G A
MEIS3
490223
Genes possibly regulated by vista2509[chr1:94216472-94216879]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 94027347 94312706 - BCAR3 ENSG00000137936.12 94312706 0.87 1.0 907 4173
Expression level of Genes
Back to top
miRNAs possibly regulated by vista2509[chr1:94216472-94216879]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results