EnhancerDB
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  3. vista25090[chr17:48066634-48067004]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25090[chr17:48066634-48067004]
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Tissue distribution of vista25090
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Transcription factor that possibly regulate vista25090[chr17:48066634-48067004]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48066659 48066679 TP63 JASPAR yes 21253131
chr17 48066659 48066679 TP63 JASPAR yes 54675566
chr17 48066660 48066678 TP53 JASPAR yes 21253132
chr17 48066660 48066678 TP53 JASPAR yes 54675567
chr17 48066662 48066677 TP53 JASPAR yes 21253133
chr17 48066662 48066677 TP53 JASPAR yes 54675568
chr17 48066684 48066688 NFE TRANSFAC yes 21253134
chr17 48066684 48066688 NFE TRANSFAC yes 54675569
chr17 48066696 48066705 NFIX JASPAR yes 21253135
chr17 48066696 48066705 NFIX JASPAR yes 54675570
chr17 48066696 48066706 NFIA JASPAR yes 21253136
chr17 48066696 48066706 NFIA JASPAR yes 54675571
chr17 48066698 48066704 NFIC JASPAR yes 21253137
chr17 48066698 48066704 NFIC JASPAR yes 54675572
chr17 48066705 48066719 JUN JASPAR yes 21253138
chr17 48066705 48066719 JUN JASPAR yes 54675573
chr17 48066718 48066726 TBX5 JASPAR yes 21253139
chr17 48066718 48066726 TBX5 JASPAR yes 54675574
chr17 48066771 48066780 HIC2 JASPAR yes 21253140
chr17 48066771 48066780 HIC2 JASPAR yes 54675575
chr17 48066773 48066792 REST JASPAR yes 21253141
chr17 48066773 48066792 REST JASPAR yes 54675576
chr17 48066774 48066778 LFA1 TRANSFAC yes 21253142
chr17 48066774 48066778 LFA1 TRANSFAC yes 54675577
chr17 48066786 48066793 CEBPA TRANSFAC yes 21253143
chr17 48066786 48066793 CEBPA TRANSFAC yes 54675578
chr17 48066793 48066804 E2F1 JASPAR yes 21253144
chr17 48066793 48066804 E2F1 JASPAR yes 54675579
chr17 48066808 48066822 JUN JASPAR yes 21253145
chr17 48066808 48066822 JUN JASPAR yes 54675580
chr17 48066810 48066821 BATF JASPAR yes 21253146
chr17 48066810 48066821 BATF JASPAR yes 54675581
chr17 48066812 48066823 FOS JASPAR yes 21253147
chr17 48066812 48066823 FOSL1 JASPAR yes 21253148
chr17 48066812 48066823 JUND JASPAR yes 21253149
chr17 48066812 48066823 FOS JASPAR yes 54675582
chr17 48066812 48066823 FOSL1 JASPAR yes 54675583
chr17 48066812 48066823 JUND JASPAR yes 54675584
chr17 48066814 48066821 JUN TRANSFAC yes 21253150
chr17 48066814 48066821 JUN TRANSFAC yes 54675585
chr17 48066845 48066851 HiNF-A TRANSFAC yes 21253151
chr17 48066845 48066851 HiNF-A TRANSFAC yes 54675586
chr17 48066854 48066860 SP1 TRANSFAC yes 21253152
chr17 48066854 48066860 SP1 TRANSFAC yes 54675587
chr17 48066854 48066864 SP1 JASPAR yes 21253153
chr17 48066854 48066864 SP1 JASPAR yes 54675588
chr17 48066890 48066894 H4TF2 TRANSFAC yes 21253154
chr17 48066890 48066894 H4TF2 TRANSFAC yes 54675589
chr17 48066893 48066903 ZNF740 JASPAR yes 21253155
chr17 48066893 48066903 ZNF740 JASPAR yes 54675590
chr17 48066896 48066902 MZF1 JASPAR yes 21253156
chr17 48066896 48066902 MZF1 JASPAR yes 54675591
chr17 48066933 48066953 RREB1 JASPAR yes 21253157
chr17 48066933 48066953 RREB1 JASPAR yes 54675592
chr17 48066956 48066969 SMAD2 JASPAR yes 21253158
chr17 48066956 48066969 SMAD2 JASPAR yes 54675593
chr17 48066969 48066984 NR2C2 JASPAR yes 21253159
chr17 48066969 48066984 NR2C2 JASPAR yes 54675594
chr17 48066971 48066981 SP1 JASPAR yes 21253160
chr17 48066971 48066981 SP1 JASPAR yes 54675595
chr17 48066977 48066982 SP1 TRANSFAC yes 21253161
chr17 48066977 48066982 SP1 TRANSFAC yes 54675596
chr17 48066981 48067001 TP53 JASPAR yes 21253162
chr17 48066981 48067001 TP53 JASPAR yes 54675597
chr17 48066990 48066999 HIC2 JASPAR yes 21253163
chr17 48066990 48066999 HIC2 JASPAR yes 54675598
chr17 48066993 48066997 LFA1 TRANSFAC yes 21253164
chr17 48066993 48066997 LFA1 TRANSFAC yes 54675599
chr17 48066999 48067009 SP1 JASPAR yes 21253165
chr17 48066999 48067009 SP1 JASPAR yes 54675600
SNP sites on vista25090[chr17:48066634-48067004]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48066683 rs563904368 C T no 4919848
chr17 48066699 rs11651418 T C
NFIA NFIC NFIX
4919849
chr17 48066886 rs145064611 T A no 4919850
chr17 48066903 rs12453559 C T
ZNF740
4919851
chr17 48066978 rs532261050 G A
NR2C2 SP1
4919852
chr17 48066998 rs12451304 A G
HIC2 TP53
4919853
Genes possibly regulated by vista25090[chr17:48066634-48067004]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48046334 48052321 + DLX4 ENSG00000108813.9 48046334 0.81 1.0 16022 79700
chr17 48067369 48072588 - DLX3 ENSG00000064195.7 48072588 0.9 0.93 16023 94416
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 0.93 1.0 16024 33672
Expression level of Genes
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miRNAs possibly regulated by vista25090[chr17:48066634-48067004]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results