EnhancerDB
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  3. vista25094[chr17:48139711-48140314]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25094[chr17:48139711-48140314]
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Tissue distribution of vista25094
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Transcription factor that possibly regulate vista25094[chr17:48139711-48140314]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48139522 48140445 POLR2A UCSC Txn Factor no Conserved 108270265
chr17 48139778 48140175 TFAP2C UCSC Txn Factor no Conserved 108270285
chr17 48139800 48140143 TFAP2A UCSC Txn Factor no Conserved 108270290
chr17 48139831 48140111 STAT3 UCSC Txn Factor no Conserved 108270295
chr17 48139717 48139724 E2F1 TRANSFAC yes 21253323
chr17 48139717 48139724 E2F1 TRANSFAC yes 54680674
chr17 48139717 48139725 E2F1 JASPAR yes 21253324
chr17 48139717 48139725 E2F1 JASPAR yes 54680675
chr17 48139718 48139733 TFAP2A JASPAR yes 21253325
chr17 48139718 48139733 TFAP2A JASPAR yes 54680676
chr17 48139733 48139737 H4TF2 TRANSFAC yes 21253326
chr17 48139733 48139737 H4TF2 TRANSFAC yes 54680677
chr17 48139742 48139754 PKNOX1 JASPAR yes 21253327
chr17 48139742 48139754 PKNOX2 JASPAR yes 21253328
chr17 48139742 48139754 TGIF1 JASPAR yes 21253329
chr17 48139742 48139754 TGIF2 JASPAR yes 21253330
chr17 48139742 48139754 PKNOX1 JASPAR yes 54680678
chr17 48139742 48139754 PKNOX2 JASPAR yes 54680679
chr17 48139742 48139754 TGIF1 JASPAR yes 54680680
chr17 48139742 48139754 TGIF2 JASPAR yes 54680681
chr17 48139748 48139752 NFE TRANSFAC yes 21253331
chr17 48139748 48139752 NFE TRANSFAC yes 54680682
chr17 48139766 48139776 ETV5 JASPAR yes 21253332
chr17 48139766 48139776 ETV5 JASPAR yes 54680683
chr17 48139772 48139787 ZIC4 JASPAR yes 21253333
chr17 48139772 48139787 ZIC4 JASPAR yes 54680684
chr17 48139773 48139787 GLIS3 JASPAR yes 21253334
chr17 48139773 48139787 GLIS3 JASPAR yes 54680685
chr17 48139783 48139787 ESR1 TRANSFAC yes 21253335
chr17 48139783 48139787 ESR1 TRANSFAC yes 54680686
chr17 48139841 48139854 SMAD2 JASPAR yes 21253336
chr17 48139841 48139854 SMAD2 JASPAR yes 54680687
chr17 48139848 48139862 PLAG1 JASPAR yes 21253337
chr17 48139848 48139862 PLAG1 JASPAR yes 54680688
chr17 48139853 48139867 TLX1 JASPAR yes 21253338
chr17 48139853 48139867 TLX1 JASPAR yes 54680689
chr17 48139854 48139868 TLX1 JASPAR yes 21253339
chr17 48139854 48139868 TLX1 JASPAR yes 54680690
chr17 48139877 48139884 ETS1 TRANSFAC yes 21253340
chr17 48139877 48139884 ETS1 TRANSFAC yes 54680691
chr17 48139885 48139896 TBX20 JASPAR yes 21253341
chr17 48139885 48139896 TBX20 JASPAR yes 54680692
chr17 48139890 48139900 SP1 JASPAR yes 21253342
chr17 48139890 48139900 SP1 JASPAR yes 54680693
chr17 48139906 48139921 TFAP2C JASPAR yes 21253343
chr17 48139906 48139921 TFAP2C JASPAR yes 54680694
chr17 48139909 48139920 EBF1 JASPAR yes 21253344
chr17 48139909 48139920 EBF1 JASPAR yes 54680695
chr17 48139910 48139916 MZF1 JASPAR yes 21253345
chr17 48139910 48139916 MZF1 JASPAR yes 54680696
chr17 48139953 48139957 H4TF2 TRANSFAC yes 21253346
chr17 48139953 48139957 H4TF2 TRANSFAC yes 54680697
chr17 48139955 48139976 ZNF263 JASPAR yes 21253347
chr17 48139955 48139976 ZNF263 JASPAR yes 54680698
chr17 48139958 48139970 INSM1 JASPAR yes 21253348
chr17 48139958 48139970 INSM1 JASPAR yes 54680699
chr17 48139962 48139977 STAT1 JASPAR yes 21253349
chr17 48139962 48139977 STAT1 JASPAR yes 54680700
chr17 48139964 48139975 STAT1 JASPAR yes 21253350
chr17 48139964 48139975 STAT3 JASPAR yes 21253351
chr17 48139964 48139975 STAT1 JASPAR yes 54680701
chr17 48139964 48139975 STAT3 JASPAR yes 54680702
chr17 48139964 48139979 RFX5 JASPAR yes 21253352
chr17 48139964 48139979 RFX5 JASPAR yes 54680703
chr17 48139971 48139982 GCM1 JASPAR yes 21253353
chr17 48139971 48139982 GCM1 JASPAR yes 54680704
chr17 48139972 48139984 INSM1 JASPAR yes 21253354
chr17 48139972 48139984 TFAP2A JASPAR yes 21253355
chr17 48139972 48139984 TFAP2B JASPAR yes 21253356
chr17 48139972 48139984 TFAP2C JASPAR yes 21253357
chr17 48139972 48139984 INSM1 JASPAR yes 54680705
chr17 48139972 48139984 TFAP2A JASPAR yes 54680706
chr17 48139972 48139984 TFAP2B JASPAR yes 54680707
chr17 48139972 48139984 TFAP2C JASPAR yes 54680708
chr17 48139973 48139984 TFAP2A JASPAR yes 21253358
chr17 48139973 48139984 TFAP2B JASPAR yes 21253359
chr17 48139973 48139984 TFAP2C JASPAR yes 21253360
chr17 48139973 48139984 TFAP2A JASPAR yes 54680709
chr17 48139973 48139984 TFAP2B JASPAR yes 54680710
chr17 48139973 48139984 TFAP2C JASPAR yes 54680711
chr17 48139985 48139995 TEAD1 JASPAR yes 21253361
chr17 48139985 48139995 TEAD4 JASPAR yes 21253362
chr17 48139985 48139995 TEAD1 JASPAR yes 54680712
chr17 48139985 48139995 TEAD4 JASPAR yes 54680713
chr17 48139985 48139997 TEAD1 JASPAR yes 21253363
chr17 48139985 48139997 TEAD1 JASPAR yes 54680714
chr17 48139986 48139994 TEAD3 JASPAR yes 21253364
chr17 48139986 48139994 TEAD3 JASPAR yes 54680715
chr17 48139996 48140015 CTCF JASPAR yes 21253365
chr17 48139996 48140015 CTCF JASPAR yes 54680716
chr17 48140015 48140035 TP63 JASPAR yes 21253366
chr17 48140015 48140035 TP63 JASPAR yes 54680717
chr17 48140016 48140034 TP53 JASPAR yes 21253367
chr17 48140016 48140034 TP53 JASPAR yes 54680718
chr17 48140017 48140037 TP53 JASPAR yes 21253368
chr17 48140017 48140037 TP53 JASPAR yes 54680719
chr17 48140018 48140033 TP53 JASPAR yes 21253369
chr17 48140018 48140033 TP53 JASPAR yes 54680720
chr17 48140029 48140038 HIC2 JASPAR yes 21253370
chr17 48140029 48140038 HIC2 JASPAR yes 54680721
chr17 48140036 48140056 TP63 JASPAR yes 21253371
chr17 48140036 48140056 TP63 JASPAR yes 54680722
chr17 48140058 48140068 SP1 JASPAR yes 21253372
chr17 48140058 48140068 SP1 JASPAR yes 54680723
chr17 48140068 48140082 PLAG1 JASPAR yes 21253373
chr17 48140068 48140082 PLAG1 JASPAR yes 54680724
chr17 48140089 48140093 H4TF2 TRANSFAC yes 21253374
chr17 48140089 48140093 H4TF2 TRANSFAC yes 54680725
chr17 48140121 48140131 NFIA JASPAR yes 21253375
chr17 48140121 48140131 NFIA JASPAR yes 54680726
chr17 48140122 48140131 NFIX JASPAR yes 21253376
chr17 48140122 48140131 NFIX JASPAR yes 54680727
chr17 48140123 48140129 NFIC JASPAR yes 21253377
chr17 48140123 48140129 NFIC JASPAR yes 54680728
chr17 48140138 48140152 TLX1 JASPAR yes 21253378
chr17 48140138 48140152 TLX1 JASPAR yes 54680729
chr17 48140191 48140203 INSM1 JASPAR yes 21253379
chr17 48140191 48140203 INSM1 JASPAR yes 54680730
chr17 48140196 48140201 SP1 TRANSFAC yes 21253380
chr17 48140196 48140201 SP1 TRANSFAC yes 54680731
chr17 48140196 48140210 PLAG1 JASPAR yes 21253381
chr17 48140196 48140210 PLAG1 JASPAR yes 54680732
chr17 48140206 48140211 SP1 TRANSFAC yes 21253382
chr17 48140206 48140211 SP1 TRANSFAC yes 54680733
chr17 48140210 48140214 LFA1 TRANSFAC yes 21253383
chr17 48140210 48140214 LFA1 TRANSFAC yes 54680734
chr17 48140211 48140221 ID4 JASPAR yes 21253384
chr17 48140211 48140221 TCF4 JASPAR yes 21253385
chr17 48140211 48140221 ID4 JASPAR yes 54680735
chr17 48140211 48140221 TCF4 JASPAR yes 54680736
chr17 48140213 48140218 USF2 TRANSFAC yes 21253386
chr17 48140213 48140218 USF2 TRANSFAC yes 54680737
chr17 48140223 48140236 SMAD2 JASPAR yes 21253387
chr17 48140223 48140236 SMAD2 JASPAR yes 54680738
chr17 48140248 48140254 YY1 JASPAR yes 21253388
chr17 48140248 48140254 YY1 JASPAR yes 54680739
chr17 48140281 48140285 YY1 TRANSFAC yes 21253389
chr17 48140281 48140285 YY1 TRANSFAC yes 54680740
chr17 48140292 48140312 RREB1 JASPAR yes 21253390
chr17 48140292 48140312 RREB1 JASPAR yes 54680741
chr17 48140297 48140318 ZNF263 JASPAR yes 21253391
chr17 48140297 48140318 ZNF263 JASPAR yes 54680742
chr17 48140307 48140312 TFAP2A TRANSFAC yes 21253392
chr17 48140307 48140312 TFAP2A TRANSFAC yes 54680743
chr17 48140307 48140313 MZF1 JASPAR yes 21253393
chr17 48140307 48140313 MZF1 JASPAR yes 54680744
SNP sites on vista25094[chr17:48139711-48140314]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48139811 rs539436487 TC T
POLR2A TFAP2A TFAP2C
4920697
chr17 48139897 rs577384668 C A
POLR2A SP1 STAT3 TFAP2A TFAP2C
4920698
chr17 48139918 rs149489011 G C
EBF1 POLR2A STAT3 TFAP2A TFAP2C
4920699
chr17 48140040 rs111826432 CCTGCA C
POLR2A STAT3 TFAP2A TFAP2C TP63
4920700
chr17 48140040 rs72026961 CCTGCA C
POLR2A STAT3 TFAP2A TFAP2C TP63
4920701
chr17 48140045 rs3785926 A C
POLR2A STAT3 TFAP2A TFAP2C TP63
4920702
chr17 48140207 rs115616380 G C,T
PLAG1 POLR2A SP1
4920703
Genes possibly regulated by vista25094[chr17:48139711-48140314]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48046334 48052321 + DLX4 ENSG00000108813.9 48046334 0.81 1.0 16022 6623
chr17 48067369 48072588 - DLX3 ENSG00000064195.7 48072588 0.9 0.93 16023 32877
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 0.93 1.0 16024 93621
chr17 48172101 48189516 + PDK2 ENSG00000005882.7 48172101 0.81 1.0 16025 68213
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 33068
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 12323
Expression level of Genes
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miRNAs possibly regulated by vista25094[chr17:48139711-48140314]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results