EnhancerDB
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  3. vista25095[chr17:48205107-48205461]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25095[chr17:48205107-48205461]
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Tissue distribution of vista25095
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Transcription factor that possibly regulate vista25095[chr17:48205107-48205461]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 48205090 48205307 RUNX3 UCSC Txn Factor no Conserved 108270319
chr17 48205109 48205124 HSF1 JASPAR yes 21253394
chr17 48205110 48205123 HSF1 JASPAR yes 21253395
chr17 48205110 48205123 HSF2 JASPAR yes 21253396
chr17 48205114 48205129 HSF1 JASPAR yes 21253397
chr17 48205115 48205128 HSF1 JASPAR yes 21253398
chr17 48205115 48205128 HSF2 JASPAR yes 21253399
chr17 48205115 48205128 HSF4 JASPAR yes 21253400
chr17 48205117 48205135 NR3C1 JASPAR yes 21253401
chr17 48205123 48205127 YY1 TRANSFAC yes 21253402
chr17 48205125 48205136 FLI1 JASPAR yes 21253403
chr17 48205126 48205139 ELF1 JASPAR yes 21253404
chr17 48205128 48205148 TP63 JASPAR yes 21253405
chr17 48205132 48205136 NFE TRANSFAC yes 21253406
chr17 48205151 48205156 ETS2 TRANSFAC yes 21253407
chr17 48205154 48205159 ETS2 TRANSFAC yes 21253408
chr17 48205154 48205162 EHF JASPAR yes 21253409
chr17 48205168 48205180 HNF1B JASPAR yes 21253410
chr17 48205176 48205179 MYB TRANSFAC yes 21253411
chr17 48205176 48205187 RUNX1 JASPAR yes 21253412
chr17 48205182 48205186 YY1 TRANSFAC yes 21253413
chr17 48205182 48205193 ELF5 JASPAR yes 21253414
chr17 48205182 48205194 EHF JASPAR yes 21253415
chr17 48205182 48205194 ELF1 JASPAR yes 21253416
chr17 48205182 48205194 ELF4 JASPAR yes 21253417
chr17 48205182 48205195 ELF1 JASPAR yes 21253418
chr17 48205183 48205191 FEV JASPAR yes 21253419
chr17 48205193 48205208 RUNX2 JASPAR yes 21253420
chr17 48205194 48205203 RUNX2 JASPAR yes 21253421
chr17 48205194 48205204 RUNX3 JASPAR yes 21253422
chr17 48205194 48205205 RUNX1 JASPAR yes 21253423
chr17 48205194 48205210 ZNF143 JASPAR yes 21253424
chr17 48205199 48205205 SOX10 JASPAR yes 21253425
chr17 48205201 48205215 GATA2 JASPAR yes 21253426
chr17 48205202 48205220 SRF JASPAR yes 21253427
chr17 48205205 48205213 GATA3 JASPAR yes 21253428
chr17 48205205 48205213 GATA5 JASPAR yes 21253429
chr17 48205220 48205232 NHLH1 JASPAR yes 21253430
chr17 48205221 48205231 NHLH1 JASPAR yes 21253431
chr17 48205227 48205246 CTCF JASPAR yes 21253432
chr17 48205242 48205263 REST JASPAR yes 21253433
chr17 48205246 48205250 NFE TRANSFAC yes 21253434
chr17 48205259 48205270 E2F6 JASPAR yes 21253435
chr17 48205272 48205276 YY1 TRANSFAC yes 21253436
chr17 48205294 48205300 ZNF354C JASPAR yes 21253437
chr17 48205308 48205323 STAT1 JASPAR yes 21253438
chr17 48205310 48205321 STAT3 JASPAR yes 21253439
chr17 48205317 48205331 SPI1 JASPAR yes 21253440
chr17 48205321 48205326 TFAP2A TRANSFAC yes 21253441
chr17 48205321 48205327 MZF1 JASPAR yes 21253442
chr17 48205331 48205345 PAX6 JASPAR yes 21253443
chr17 48205331 48205350 PAX5 JASPAR yes 21253444
chr17 48205345 48205360 MEF2C JASPAR yes 21253445
chr17 48205346 48205351 ETS2 TRANSFAC yes 21253446
chr17 48205346 48205361 MEF2A JASPAR yes 21253447
chr17 48205348 48205358 MEF2A JASPAR yes 21253448
chr17 48205364 48205376 E2F8 JASPAR yes 21253449
chr17 48205366 48205376 ZNF740 JASPAR yes 21253450
chr17 48205366 48205380 GLIS2 JASPAR yes 21253451
chr17 48205366 48205380 GLIS3 JASPAR yes 21253452
chr17 48205367 48205377 ZNF740 JASPAR yes 21253453
chr17 48205368 48205383 NFYB JASPAR yes 21253454
chr17 48205370 48205386 NFYA JASPAR yes 21253455
chr17 48205371 48205389 NFYA JASPAR yes 21253456
chr17 48205372 48205384 PBX1 JASPAR yes 21253457
chr17 48205375 48205379 H1TF2 TRANSFAC yes 21253458
chr17 48205375 48205379 NFE TRANSFAC yes 21253459
chr17 48205375 48205379 SRF TRANSFAC yes 21253460
chr17 48205393 48205408 LEF1 JASPAR yes 21253461
chr17 48205404 48205408 H4TF2 TRANSFAC yes 21253462
chr17 48205416 48205422 ETS1 JASPAR yes 21253463
chr17 48205416 48205422 SPI1 JASPAR yes 21253464
SNP sites on vista25095[chr17:48205107-48205461]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 48205283 rs575352342 C G,T
RUNX3
4920960
chr17 48205390 rs73332665 G A no 4920961
chr17 48205422 rs4533329 G A
ETS1 SPI1
4920962
Genes possibly regulated by vista25095[chr17:48205107-48205461]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 0.93 1.0 16024 28225
chr17 48172101 48189516 + PDK2 ENSG00000005882.7 48172101 0.81 1.0 16025 66994
chr17 48187404 48207246 - SAMD14 ENSG00000167100.10 48207246 0.88 1.0 16026 98215
chr17 48211104 48227991 - PPP1R9B ENSG00000108819.9 48227991 0.74 1.0 16027 77470
chr17 48241575 48253292 + SGCA ENSG00000108823.11 48241575 0.88 1.0 16028 63886
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 0.95 0.99 16029 26468
Expression level of Genes
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miRNAs possibly regulated by vista25095[chr17:48205107-48205461]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results